RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 CCDC85AQ96PX6 553 aaPredicted RBP10.45□□□□□ -0.74
PTPN12-211ENST00000481154 COG6Q9Y2V7 657 aa10.45□□□□□ -0.74
PTPN12-211ENST00000481154 FAM181BA6NEQ2 426 aa10.44□□□□□ -0.74
PTPN12-211ENST00000481154 ATP5J2-PTCD1G3V325 749 aa10.44□□□□□ -0.74
PTPN12-211ENST00000481154 POM121Q96HA1 1249 aa10.44□□□□□ -0.74
PTPN12-211ENST00000481154 CDCA7Q9BWT1 371 aaPredicted RBP10.44□□□□□ -0.74
PTPN12-211ENST00000481154 MEN1O00255 615 aa10.42□□□□□ -0.74
PTPN12-211ENST00000481154 VSIG8P0DPA2 414 aa10.42□□□□□ -0.74
PTPN12-211ENST00000481154 TSGA10IPQ3SY00 556 aa10.42□□□□□ -0.74
PTPN12-211ENST00000481154 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
PTPN12-211ENST00000481154 OSBPL3Q9H4L5 887 aa10.41□□□□□ -0.74
PTPN12-211ENST00000481154 A0A1W2PRU2 124 aa10.4□□□□□ -0.74
PTPN12-211ENST00000481154 RAB6BQ9NRW1 208 aa10.4□□□□□ -0.74
PTPN12-211ENST00000481154 TRAK2O60296 914 aa10.39□□□□□ -0.75
PTPN12-211ENST00000481154 WASHC4Q2M389 1173 aa10.39□□□□□ -0.75
PTPN12-211ENST00000481154 SLFNL1Q499Z3 407 aa10.39□□□□□ -0.75
PTPN12-211ENST00000481154 CYP2U1Q7Z449 544 aa10.39□□□□□ -0.75
PTPN12-211ENST00000481154 CCDC155Q8N6L0 562 aa10.39□□□□□ -0.75
PTPN12-211ENST00000481154 TRIM52Q96A61 297 aa10.39□□□□□ -0.75
PTPN12-211ENST00000481154 ARHGEF10LQ9HCE6 1279 aa10.39□□□□□ -0.75
PTPN12-211ENST00000481154 PRICKLE2Q7Z3G6 844 aa10.38□□□□□ -0.75
PTPN12-211ENST00000481154 RNF135Q8IUD6 432 aa10.38□□□□□ -0.75
PTPN12-211ENST00000481154 PHTF2Q8N3S3 785 aa10.38□□□□□ -0.75
PTPN12-211ENST00000481154 ESF1Q9H501 851 aaKnown RBP10.38□□□□□ -0.75
PTPN12-211ENST00000481154 DOLKQ9UPQ8 538 aa10.38□□□□□ -0.75
PTPN12-211ENST00000481154 SLC35F4A4IF30 521 aa10.37□□□□□ -0.75
PTPN12-211ENST00000481154 RHOQP17081 205 aa10.37□□□□□ -0.75
PTPN12-211ENST00000481154 LYSMD3Q7Z3D4 306 aa10.37□□□□□ -0.75
PTPN12-211ENST00000481154 SENP3-EIF4A1A0A087X0R7 540 aa10.36□□□□□ -0.75
PTPN12-211ENST00000481154 RNF144AP50876 292 aaPredicted RBP10.36□□□□□ -0.75
PTPN12-211ENST00000481154 OXLD1Q5BKU9 147 aa10.36□□□□□ -0.75
PTPN12-211ENST00000481154 MYCP01106 439 aaPredicted RBP10.35□□□□□ -0.75
PTPN12-211ENST00000481154 UBTFP17480 764 aaKnown RBP10.35□□□□□ -0.75
PTPN12-211ENST00000481154 SEMA3FQ13275 785 aa10.35□□□□□ -0.75
PTPN12-211ENST00000481154 NLRP3Q96P20 1036 aa10.35□□□□□ -0.75
PTPN12-211ENST00000481154 STAU1O95793 577 aaKnown RBP10.34□□□□□ -0.75
PTPN12-211ENST00000481154 FLIIQ13045 1269 aa10.34□□□□□ -0.75
PTPN12-211ENST00000481154 GPR161Q8N6U8 529 aaKnown RBP10.34□□□□□ -0.75
PTPN12-211ENST00000481154 ITGA6P23229 1130 aa10.33□□□□□ -0.76
PTPN12-211ENST00000481154 CLN3Q13286 438 aa10.33□□□□□ -0.76
PTPN12-211ENST00000481154 PIK3CDO00329 1044 aa10.32□□□□□ -0.76
PTPN12-211ENST00000481154 RAD21O60216 631 aa10.32□□□□□ -0.76
PTPN12-211ENST00000481154 SLC27A3Q5K4L6 730 aa10.32□□□□□ -0.76
PTPN12-211ENST00000481154 LOC100996750A0A140TA64 210 aa10.31□□□□□ -0.76
PTPN12-211ENST00000481154 CDC14CA4D256 554 aa10.31□□□□□ -0.76
PTPN12-211ENST00000481154 IL2RAP01589 272 aa10.31□□□□□ -0.76
PTPN12-211ENST00000481154 GPC1P35052 558 aa10.31□□□□□ -0.76
PTPN12-211ENST00000481154 KRTAP4-6Q9BYQ5 205 aa10.31□□□□□ -0.76
PTPN12-211ENST00000481154 CHIC2Q9UKJ5 165 aa10.31□□□□□ -0.76
PTPN12-211ENST00000481154 GTF3C3Q9Y5Q9 886 aa10.31□□□□□ -0.76
PTPN12-211ENST00000481154 GNRH1P01148 92 aa10.3□□□□□ -0.76
PTPN12-211ENST00000481154 SOX11P35716 441 aa10.3□□□□□ -0.76
PTPN12-211ENST00000481154 GSK3AP49840 483 aa10.3□□□□□ -0.76
PTPN12-211ENST00000481154 POU4F2Q12837 409 aa10.3□□□□□ -0.76
PTPN12-211ENST00000481154 VWA5B2Q8N398 1253 aa10.3□□□□□ -0.76
PTPN12-211ENST00000481154 PLPP7Q8NBV4 271 aa10.3□□□□□ -0.76
PTPN12-211ENST00000481154 CNKSR1Q969H4 720 aa10.3□□□□□ -0.76
PTPN12-211ENST00000481154 POM121CA8CG34 1229 aa10.29□□□□□ -0.76
PTPN12-211ENST00000481154 USP4Q13107 963 aa10.29□□□□□ -0.76
PTPN12-211ENST00000481154 GRIP2Q9C0E4 1043 aa10.29□□□□□ -0.76
PTPN12-211ENST00000481154 CUEDC1Q9NWM3 386 aaPredicted RBP10.29□□□□□ -0.76
PTPN12-211ENST00000481154 KRT76Q01546 638 aa10.28□□□□□ -0.76
PTPN12-211ENST00000481154 WWC1Q8IX03 1113 aa10.28□□□□□ -0.76
PTPN12-211ENST00000481154 CENPCQ03188 943 aa10.27□□□□□ -0.77
PTPN12-211ENST00000481154 NANOS1Q8WY41 292 aaKnown RBP10.27□□□□□ -0.77
PTPN12-211ENST00000481154 CLUAP1Q96AJ1 413 aa10.27□□□□□ -0.77
PTPN12-211ENST00000481154 ESYT1Q9BSJ8 1104 aa10.27□□□□□ -0.77
PTPN12-211ENST00000481154 ALG2Q9H553 416 aa10.27□□□□□ -0.77
PTPN12-211ENST00000481154 ETNK1Q9HBU6 452 aa10.26□□□□□ -0.77
PTPN12-211ENST00000481154 MAP7D1Q3KQU3 841 aa10.25□□□□□ -0.77
PTPN12-211ENST00000481154 NBPF10Q6P3W6 841 aaKnown RBP10.25□□□□□ -0.77
PTPN12-211ENST00000481154 SV2AQ7L0J3 742 aa10.25□□□□□ -0.77
PTPN12-211ENST00000481154 NBPF15Q8N660 670 aa10.25□□□□□ -0.77
PTPN12-211ENST00000481154 ADAMTS19Q8TE59 1207 aa10.25□□□□□ -0.77
PTPN12-211ENST00000481154 CNTNAP3BQ96NU0 1288 aa10.25□□□□□ -0.77
PTPN12-211ENST00000481154 COL25A1Q9BXS0 654 aaPredicted RBP10.25□□□□□ -0.77
PTPN12-211ENST00000481154 CNTNAP3Q9BZ76 1288 aa10.25□□□□□ -0.77
PTPN12-211ENST00000481154 HRH3Q9Y5N1 445 aa10.25□□□□□ -0.77
PTPN12-211ENST00000481154 SKIP12755 728 aa10.24□□□□□ -0.77
PTPN12-211ENST00000481154 RNFT1Q5M7Z0 435 aa10.24□□□□□ -0.77
PTPN12-211ENST00000481154 XAGE2Q96GT9 111 aa10.24□□□□□ -0.77
PTPN12-211ENST00000481154 GAS2L1Q99501 681 aaPredicted RBP10.24□□□□□ -0.77
PTPN12-211ENST00000481154 SPATA31C2B4DYI2 1134 aa10.23□□□□□ -0.77
PTPN12-211ENST00000481154 WASLO00401 505 aaPredicted RBP10.23□□□□□ -0.77
PTPN12-211ENST00000481154 PHKA2P46019 1235 aa10.23□□□□□ -0.77
PTPN12-211ENST00000481154 RIPOR1Q6ZS17 1223 aa10.23□□□□□ -0.77
PTPN12-211ENST00000481154 SIRT1Q96EB6 747 aa10.23□□□□□ -0.77
PTPN12-211ENST00000481154 ZSCAN10Q96SZ4 725 aaPredicted RBP10.23□□□□□ -0.77
PTPN12-211ENST00000481154 FHDC1Q9C0D6 1143 aaPredicted RBP10.23□□□□□ -0.77
PTPN12-211ENST00000481154 SCNN1DP51172 638 aa10.22□□□□□ -0.77
PTPN12-211ENST00000481154 KCNMA1Q12791 1236 aa10.22□□□□□ -0.77
PTPN12-211ENST00000481154 ESCO1Q5FWF5 840 aa10.22□□□□□ -0.77
PTPN12-211ENST00000481154 TAS1R3Q7RTX0 852 aa10.22□□□□□ -0.77
PTPN12-211ENST00000481154 GDF10P55107 478 aa10.21□□□□□ -0.77
PTPN12-211ENST00000481154 TLR1Q15399 786 aa10.21□□□□□ -0.77
PTPN12-211ENST00000481154 DEPDC4Q8N2C3 294 aa10.21□□□□□ -0.77
PTPN12-211ENST00000481154 TIMMDC1Q9NPL8 285 aa10.21□□□□□ -0.77
PTPN12-211ENST00000481154 DYRK1BQ9Y463 629 aa10.21□□□□□ -0.77
PTPN12-211ENST00000481154 TMEM214Q6NUQ4 689 aaKnown RBP10.2□□□□□ -0.78
PTPN12-211ENST00000481154 ZNF837Q96EG3 531 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms