RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 C1orf115Q9H7X2 142 aa11.91□□□□□ -0.5
CBX3-206ENST00000481057 TOR4AQ9NXH8 423 aa11.9□□□□□ -0.5
CBX3-206ENST00000481057 CEP126Q9P2H0 1117 aa11.9□□□□□ -0.5
CBX3-206ENST00000481057 ESPNB1AK53 854 aa11.89□□□□□ -0.51
CBX3-206ENST00000481057 ADH1CP00326 375 aa11.89□□□□□ -0.51
CBX3-206ENST00000481057 CYP4X1Q8N118 509 aa11.89□□□□□ -0.51
CBX3-206ENST00000481057 KCTD15Q96SI1 283 aaPredicted RBP11.89□□□□□ -0.51
CBX3-206ENST00000481057 PBRM1Q86U86 1689 aa11.89□□□□□ -0.51
CBX3-206ENST00000481057 TEX14Q8IWB6 1497 aa11.89□□□□□ -0.51
CBX3-206ENST00000481057 ALDH1A1P00352 501 aa11.88□□□□□ -0.51
CBX3-206ENST00000481057 FSHRP23945 695 aa11.88□□□□□ -0.51
CBX3-206ENST00000481057 GIGYF1O75420 1035 aaPredicted RBP11.87□□□□□ -0.51
CBX3-206ENST00000481057 GRM5P41594 1212 aa11.87□□□□□ -0.51
CBX3-206ENST00000481057 UCN2Q96RP3 112 aa11.87□□□□□ -0.51
CBX3-206ENST00000481057 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
CBX3-206ENST00000481057 TTC24A2A3L6 582 aaPredicted RBP11.86□□□□□ -0.51
CBX3-206ENST00000481057 INTS6LQ5JSJ4 861 aaKnown RBP11.86□□□□□ -0.51
CBX3-206ENST00000481057 SEPT12Q8IYM1 358 aa11.85□□□□□ -0.51
CBX3-206ENST00000481057 PHTF2Q8N3S3 785 aa11.85□□□□□ -0.51
CBX3-206ENST00000481057 J3QL48 77 aa11.84□□□□□ -0.51
CBX3-206ENST00000481057 PIK3CDO00329 1044 aa11.84□□□□□ -0.51
CBX3-206ENST00000481057 NR5A1Q13285 461 aa11.84□□□□□ -0.51
CBX3-206ENST00000481057 SLFNL1Q499Z3 407 aa11.84□□□□□ -0.51
CBX3-206ENST00000481057 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
CBX3-206ENST00000481057 SMPD1P17405 629 aa11.83□□□□□ -0.52
CBX3-206ENST00000481057 RNF135Q8IUD6 432 aa11.83□□□□□ -0.52
CBX3-206ENST00000481057 WASF2Q9Y6W5 498 aa11.83□□□□□ -0.52
CBX3-206ENST00000481057 ASXL2Q76L83 1435 aa11.83□□□□□ -0.52
CBX3-206ENST00000481057 IQSEC2Q5JU85 1478 aa11.83□□□□□ -0.52
CBX3-206ENST00000481057 NR3C2P08235 984 aa11.82□□□□□ -0.52
CBX3-206ENST00000481057 NNTQ13423 1086 aa11.82□□□□□ -0.52
CBX3-206ENST00000481057 RNF20Q5VTR2 975 aa11.82□□□□□ -0.52
CBX3-206ENST00000481057 RAB15P59190 212 aa11.81□□□□□ -0.52
CBX3-206ENST00000481057 CCDC82Q8N4S0 544 aa11.81□□□□□ -0.52
CBX3-206ENST00000481057 NFATC2IPQ8NCF5 419 aa11.81□□□□□ -0.52
CBX3-206ENST00000481057 CHIC2Q9UKJ5 165 aa11.81□□□□□ -0.52
CBX3-206ENST00000481057 PLB1Q6P1J6 1458 aa11.81□□□□□ -0.52
CBX3-206ENST00000481057 MADDQ8WXG6 1647 aa11.8□□□□□ -0.52
CBX3-206ENST00000481057 MAP3K4Q9Y6R4 1608 aa11.8□□□□□ -0.52
CBX3-206ENST00000481057 UBAP1LF5GYI3 381 aa11.8□□□□□ -0.52
CBX3-206ENST00000481057 CCDC125Q86Z20 511 aa11.8□□□□□ -0.52
CBX3-206ENST00000481057 CCDC116Q8IYX3 515 aa11.8□□□□□ -0.52
CBX3-206ENST00000481057 CCDC97Q96F63 343 aaPredicted RBP11.8□□□□□ -0.52
CBX3-206ENST00000481057 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
CBX3-206ENST00000481057 SRCAPQ6ZRS2 3230 aa11.79□□□□□ -0.52
CBX3-206ENST00000481057 TBC1D9Q6ZT07 1266 aa11.79□□□□□ -0.52
CBX3-206ENST00000481057 SERPINA10Q9UK55 444 aa11.79□□□□□ -0.52
CBX3-206ENST00000481057 YEATS2Q9ULM3 1422 aa11.78□□□□□ -0.52
CBX3-206ENST00000481057 ERVH48-1M5A8F1 160 aa11.78□□□□□ -0.52
CBX3-206ENST00000481057 NRG2O14511 850 aaPredicted RBP11.78□□□□□ -0.52
CBX3-206ENST00000481057 SKIP12755 728 aa11.78□□□□□ -0.52
CBX3-206ENST00000481057 DHX9Q08211 1270 aaKnown RBP11.78□□□□□ -0.52
CBX3-206ENST00000481057 PLPP7Q8NBV4 271 aa11.78□□□□□ -0.52
CBX3-206ENST00000481057 PPP1R12CQ9BZL4 782 aa11.78□□□□□ -0.52
CBX3-206ENST00000481057 PALM3A6NDB9 673 aaPredicted RBP11.77□□□□□ -0.53
CBX3-206ENST00000481057 ATP9BO43861 1147 aa11.77□□□□□ -0.53
CBX3-206ENST00000481057 GFRA3O60609 400 aa11.77□□□□□ -0.53
CBX3-206ENST00000481057 DOLKQ9UPQ8 538 aa11.77□□□□□ -0.53
CBX3-206ENST00000481057 LTBP4Q8N2S1 1624 aa11.76□□□□□ -0.53
CBX3-206ENST00000481057 FAM187AA6NFU0 413 aa11.76□□□□□ -0.53
CBX3-206ENST00000481057 HSPA1LP34931 641 aa11.76□□□□□ -0.53
CBX3-206ENST00000481057 TSGA10IPQ3SY00 556 aa11.76□□□□□ -0.53
CBX3-206ENST00000481057 PPP1R26Q5T8A7 1209 aaPredicted RBP11.76□□□□□ -0.53
CBX3-206ENST00000481057 TRAF7Q6Q0C0 670 aa11.76□□□□□ -0.53
CBX3-206ENST00000481057 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
CBX3-206ENST00000481057 PCDHB11Q9Y5F2 797 aa11.76□□□□□ -0.53
CBX3-206ENST00000481057 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
CBX3-206ENST00000481057 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
CBX3-206ENST00000481057 MAP7D1Q3KQU3 841 aa11.75□□□□□ -0.53
CBX3-206ENST00000481057 HPS1Q92902 700 aa11.75□□□□□ -0.53
CBX3-206ENST00000481057 TMPRSS4Q9NRS4 437 aa11.75□□□□□ -0.53
CBX3-206ENST00000481057 MAFBQ9Y5Q3 323 aaPredicted RBP11.75□□□□□ -0.53
CBX3-206ENST00000481057 CFAP70Q5T0N1 1121 aa11.74□□□□□ -0.53
CBX3-206ENST00000481057 KLF16Q9BXK1 252 aaPredicted RBP11.74□□□□□ -0.53
CBX3-206ENST00000481057 EMILIN1Q9Y6C2 1016 aa11.74□□□□□ -0.53
CBX3-206ENST00000481057 KIAA0586Q9BVV6 1533 aa11.74□□□□□ -0.53
CBX3-206ENST00000481057 BCORL1Q5H9F3 1711 aa11.74□□□□□ -0.53
CBX3-206ENST00000481057 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
CBX3-206ENST00000481057 LAPTM4AQ15012 233 aa11.73□□□□□ -0.53
CBX3-206ENST00000481057 PLEKHM2Q8IWE5 1019 aa11.73□□□□□ -0.53
CBX3-206ENST00000481057 CDCA7Q9BWT1 371 aaPredicted RBP11.73□□□□□ -0.53
CBX3-206ENST00000481057 ARID4BQ4LE39 1312 aaPredicted RBP11.72□□□□□ -0.53
CBX3-206ENST00000481057 USP17L3A6NCW0 530 aa11.72□□□□□ -0.53
CBX3-206ENST00000481057 USP17L4A6NCW7 530 aa11.72□□□□□ -0.53
CBX3-206ENST00000481057 USP17L2Q6R6M4 530 aa11.72□□□□□ -0.53
CBX3-206ENST00000481057 USP17L1Q7RTZ2 530 aa11.72□□□□□ -0.53
CBX3-206ENST00000481057 ZNF784Q8NCA9 323 aaPredicted RBP11.72□□□□□ -0.53
CBX3-206ENST00000481057 PGPEP1Q9NXJ5 209 aa11.72□□□□□ -0.53
CBX3-206ENST00000481057 STRCQ7RTU9 1775 aa11.72□□□□□ -0.53
CBX3-206ENST00000481057 RIMS1Q86UR5 1692 aaKnown RBP11.71□□□□□ -0.53
CBX3-206ENST00000481057 PTPRTO14522 1441 aa11.71□□□□□ -0.53
CBX3-206ENST00000481057 TIMP2P16035 220 aa11.71□□□□□ -0.53
CBX3-206ENST00000481057 WDR4P57081 412 aaKnown RBP11.71□□□□□ -0.53
CBX3-206ENST00000481057 OXLD1Q5BKU9 147 aa11.71□□□□□ -0.53
CBX3-206ENST00000481057 ITPKCQ96DU7 683 aa11.71□□□□□ -0.53
CBX3-206ENST00000481057 IRX2Q9BZI1 471 aaPredicted RBP11.71□□□□□ -0.53
CBX3-206ENST00000481057 ADAMTS12P58397 1594 aa11.71□□□□□ -0.54
CBX3-206ENST00000481057 ABCC2Q92887 1545 aa11.7□□□□□ -0.54
CBX3-206ENST00000481057 DGAT1O75907 488 aa11.7□□□□□ -0.54
CBX3-206ENST00000481057 ZIC2O95409 532 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms