RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 EXOC5O00471 708 aa16.52■□□□□ 0.24
SHROOM3-205ENST00000481002 DDB1Q16531 1140 aa16.52■□□□□ 0.24
SHROOM3-205ENST00000481002 MIER1Q8N108 512 aa16.52■□□□□ 0.24
SHROOM3-205ENST00000481002 MRS2Q9HD23 443 aa16.52■□□□□ 0.24
SHROOM3-205ENST00000481002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.52■□□□□ 0.24
SHROOM3-205ENST00000481002 PKD1L3Q7Z443 1732 aa16.52■□□□□ 0.24
SHROOM3-205ENST00000481002 SHANK3Q9BYB0 1731 aa16.51■□□□□ 0.23
SHROOM3-205ENST00000481002 A0A0G2JS52 829 aa16.51■□□□□ 0.23
SHROOM3-205ENST00000481002 MYT1Q01538 1121 aa16.51■□□□□ 0.23
SHROOM3-205ENST00000481002 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
SHROOM3-205ENST00000481002 RSPH6AQ9H0K4 717 aa16.51■□□□□ 0.23
SHROOM3-205ENST00000481002 PNISRQ8TF01 805 aaKnown RBP16.5■□□□□ 0.23
SHROOM3-205ENST00000481002 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
SHROOM3-205ENST00000481002 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
SHROOM3-205ENST00000481002 ADAMTS8Q9UP79 889 aa16.49■□□□□ 0.23
SHROOM3-205ENST00000481002 PDE3BQ13370 1112 aa16.48■□□□□ 0.23
SHROOM3-205ENST00000481002 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
SHROOM3-205ENST00000481002 PLEKHO1Q53GL0 409 aaPredicted RBP16.48■□□□□ 0.23
SHROOM3-205ENST00000481002 KRT27Q7Z3Y8 459 aa16.48■□□□□ 0.23
SHROOM3-205ENST00000481002 PNNQ9H307 717 aaKnown RBP16.48■□□□□ 0.23
SHROOM3-205ENST00000481002 SPG7Q9UQ90 795 aa16.48■□□□□ 0.23
SHROOM3-205ENST00000481002 PRKAR2BP31323 418 aa16.47■□□□□ 0.23
SHROOM3-205ENST00000481002 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
SHROOM3-205ENST00000481002 MARCH10Q8NA82 808 aaPredicted RBP16.46■□□□□ 0.23
SHROOM3-205ENST00000481002 CYP27B1O15528 508 aa16.45■□□□□ 0.22
SHROOM3-205ENST00000481002 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
SHROOM3-205ENST00000481002 PCDH11XQ9BZA7 1347 aa16.45■□□□□ 0.22
SHROOM3-205ENST00000481002 PCDH11YQ9BZA8 1340 aa16.45■□□□□ 0.22
SHROOM3-205ENST00000481002 KAT6BQ8WYB5 2073 aa16.44■□□□□ 0.22
SHROOM3-205ENST00000481002 ILDR2Q71H61 639 aa16.44■□□□□ 0.22
SHROOM3-205ENST00000481002 DDX54Q8TDD1 881 aaKnown RBP16.44■□□□□ 0.22
SHROOM3-205ENST00000481002 SBF2Q86WG5 1849 aa16.43■□□□□ 0.22
SHROOM3-205ENST00000481002 MTHFSDQ2M296 383 aaKnown RBP16.43■□□□□ 0.22
SHROOM3-205ENST00000481002 IFNL2Q8IZJ0 200 aa16.43■□□□□ 0.22
SHROOM3-205ENST00000481002 BCL9O00512 1426 aa16.43■□□□□ 0.22
SHROOM3-205ENST00000481002 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
SHROOM3-205ENST00000481002 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
SHROOM3-205ENST00000481002 NEFMP07197 916 aa16.42■□□□□ 0.22
SHROOM3-205ENST00000481002 PHKG2P15735 406 aa16.42■□□□□ 0.22
SHROOM3-205ENST00000481002 NKX1-1Q15270 411 aaPredicted RBP16.42■□□□□ 0.22
SHROOM3-205ENST00000481002 ZNF530Q6P9A1 599 aaPredicted RBP16.42■□□□□ 0.22
SHROOM3-205ENST00000481002 RUNDC1Q96C34 613 aa16.42■□□□□ 0.22
SHROOM3-205ENST00000481002 FAM182BQ5T319 152 aa16.41■□□□□ 0.22
SHROOM3-205ENST00000481002 FAM196AQ6ZSG2 479 aa16.41■□□□□ 0.22
SHROOM3-205ENST00000481002 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
SHROOM3-205ENST00000481002 AKAP4Q5JQC9 854 aa16.4■□□□□ 0.22
SHROOM3-205ENST00000481002 EP400Q96L91 3159 aa16.4■□□□□ 0.22
SHROOM3-205ENST00000481002 SCN11AQ9UI33 1791 aa16.39■□□□□ 0.21
SHROOM3-205ENST00000481002 HSP90AB1P08238 724 aaKnown RBP16.39■□□□□ 0.21
SHROOM3-205ENST00000481002 C1orf141Q5JVX7 400 aa16.39■□□□□ 0.21
SHROOM3-205ENST00000481002 CCDC146Q8IYE0 955 aa16.39■□□□□ 0.21
SHROOM3-205ENST00000481002 FAM9BQ8IZU0 186 aa16.39■□□□□ 0.21
SHROOM3-205ENST00000481002 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
SHROOM3-205ENST00000481002 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
SHROOM3-205ENST00000481002 ADAMTS7Q9UKP4 1686 aa16.37■□□□□ 0.21
SHROOM3-205ENST00000481002 DCAF5Q96JK2 942 aa16.37■□□□□ 0.21
SHROOM3-205ENST00000481002 ITGB4P16144 1822 aa16.37■□□□□ 0.21
SHROOM3-205ENST00000481002 DOT1LQ8TEK3 1739 aa16.36■□□□□ 0.21
SHROOM3-205ENST00000481002 TOGARAM1Q9Y4F4 1720 aa16.36■□□□□ 0.21
SHROOM3-205ENST00000481002 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
SHROOM3-205ENST00000481002 TMPOP42166 694 aaKnown RBP16.36■□□□□ 0.21
SHROOM3-205ENST00000481002 MAP3K5Q99683 1374 aa16.36■□□□□ 0.21
SHROOM3-205ENST00000481002 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
SHROOM3-205ENST00000481002 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
SHROOM3-205ENST00000481002 APAF1O14727 1248 aa16.34■□□□□ 0.21
SHROOM3-205ENST00000481002 RNMTO43148 476 aaKnown RBP16.34■□□□□ 0.21
SHROOM3-205ENST00000481002 MPRIPQ6WCQ1 1025 aa16.34■□□□□ 0.21
SHROOM3-205ENST00000481002 LGR6Q9HBX8 967 aa16.34■□□□□ 0.21
SHROOM3-205ENST00000481002 KDM6AO15550 1401 aaPredicted RBP16.34■□□□□ 0.21
SHROOM3-205ENST00000481002 ERVV-2B6SEH9 535 aa16.33■□□□□ 0.2
SHROOM3-205ENST00000481002 RIPK4P57078 832 aa16.33■□□□□ 0.2
SHROOM3-205ENST00000481002 IL17REQ8NFR9 667 aa16.33■□□□□ 0.2
SHROOM3-205ENST00000481002 KCNQ2O43526 872 aa16.32■□□□□ 0.2
SHROOM3-205ENST00000481002 PRIM1P49642 420 aaKnown RBP16.32■□□□□ 0.2
SHROOM3-205ENST00000481002 ACSBG1Q96GR2 724 aa16.32■□□□□ 0.2
SHROOM3-205ENST00000481002 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
SHROOM3-205ENST00000481002 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
SHROOM3-205ENST00000481002 TRIM37O94972 964 aa16.31■□□□□ 0.2
SHROOM3-205ENST00000481002 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
SHROOM3-205ENST00000481002 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
SHROOM3-205ENST00000481002 RRP7AQ9Y3A4 280 aaKnown RBP16.31■□□□□ 0.2
SHROOM3-205ENST00000481002 BTAF1O14981 1849 aa16.31■□□□□ 0.2
SHROOM3-205ENST00000481002 SIPA1L3O60292 1781 aaPredicted RBP16.31■□□□□ 0.2
SHROOM3-205ENST00000481002 TNS1Q9HBL0 1735 aaKnown RBP16.31■□□□□ 0.2
SHROOM3-205ENST00000481002 NEUROD2Q15784 382 aa16.3■□□□□ 0.2
SHROOM3-205ENST00000481002 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
SHROOM3-205ENST00000481002 CCDC125Q86Z20 511 aa16.3■□□□□ 0.2
SHROOM3-205ENST00000481002 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
SHROOM3-205ENST00000481002 SLC52A2Q9HAB3 445 aa16.29■□□□□ 0.2
SHROOM3-205ENST00000481002 TRIM35Q9UPQ4 493 aa16.29■□□□□ 0.2
SHROOM3-205ENST00000481002 MRC1P22897 1456 aa16.29■□□□□ 0.2
SHROOM3-205ENST00000481002 CABP4P57796 275 aa16.28■□□□□ 0.2
SHROOM3-205ENST00000481002 DCTN1Q14203 1278 aa16.28■□□□□ 0.2
SHROOM3-205ENST00000481002 MCM10Q7L590 875 aa16.28■□□□□ 0.2
SHROOM3-205ENST00000481002 NGEFQ8N5V2 710 aa16.28■□□□□ 0.2
SHROOM3-205ENST00000481002 NFATC2IPQ8NCF5 419 aa16.28■□□□□ 0.2
SHROOM3-205ENST00000481002 PIGBQ92521 554 aa16.28■□□□□ 0.2
SHROOM3-205ENST00000481002 UPF1Q92900 1129 aaKnown RBP eCLIP16.28■□□□□ 0.2
SHROOM3-205ENST00000481002 SYTL4Q96C24 671 aaPredicted RBP16.28■□□□□ 0.2
SHROOM3-205ENST00000481002 TMOD3Q9NYL9 352 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms