RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 TWISTNBQ3B726 338 aaPredicted RBP35.68■■■■□ 3.3
TNFRSF25-213ENST00000480393 MAP3K5Q99683 1374 aa35.67■■■■□ 3.3
TNFRSF25-213ENST00000480393 CHL1O00533 1208 aa35.67■■■■□ 3.3
TNFRSF25-213ENST00000480393 VAMP4O75379 141 aa35.67■■■■□ 3.3
TNFRSF25-213ENST00000480393 TNNQ9UQP3 1299 aa35.67■■■■□ 3.3
TNFRSF25-213ENST00000480393 RGPD2P0DJD1 1756 aa35.67■■■■□ 3.3
TNFRSF25-213ENST00000480393 TSPYL6Q8N831 410 aa35.66■■■■□ 3.3
TNFRSF25-213ENST00000480393 CLUAP1Q96AJ1 413 aa35.66■■■■□ 3.3
TNFRSF25-213ENST00000480393 DZIP1LQ8IYY4 767 aaKnown RBP35.66■■■■□ 3.3
TNFRSF25-213ENST00000480393 IPO8O15397 1037 aaKnown RBP35.65■■■■□ 3.3
TNFRSF25-213ENST00000480393 RLBP1P12271 317 aa35.65■■■■□ 3.3
TNFRSF25-213ENST00000480393 NOB1Q9ULX3 412 aaKnown RBP35.64■■■■□ 3.3
TNFRSF25-213ENST00000480393 ELL2O00472 640 aaPredicted RBP35.63■■■■□ 3.29
TNFRSF25-213ENST00000480393 C8orf58Q8NAV2 365 aa35.63■■■■□ 3.29
TNFRSF25-213ENST00000480393 LRRC37A3O60309 1634 aa35.63■■■■□ 3.29
TNFRSF25-213ENST00000480393 ATF7IPQ6VMQ6 1270 aa35.63■■■■□ 3.29
TNFRSF25-213ENST00000480393 AXIN2Q9Y2T1 843 aa35.63■■■■□ 3.29
TNFRSF25-213ENST00000480393 NCAPD2Q15021 1401 aa35.63■■■■□ 3.29
TNFRSF25-213ENST00000480393 CAMTA1Q9Y6Y1 1673 aa35.63■■■■□ 3.29
TNFRSF25-213ENST00000480393 CRYBG1Q9Y4K1 1723 aa35.62■■■■□ 3.29
TNFRSF25-213ENST00000480393 AAMPQ13685 434 aa35.62■■■■□ 3.29
TNFRSF25-213ENST00000480393 HAP1P54257 671 aaPredicted RBP35.61■■■■□ 3.29
TNFRSF25-213ENST00000480393 CABLES1Q8TDN4 633 aa35.61■■■■□ 3.29
TNFRSF25-213ENST00000480393 TRIM27P14373 513 aa35.6■■■■□ 3.29
TNFRSF25-213ENST00000480393 BRPF1P55201 1214 aaPredicted RBP35.6■■■■□ 3.29
TNFRSF25-213ENST00000480393 CENPQQ7L2Z9 268 aaPredicted RBP35.6■■■■□ 3.29
TNFRSF25-213ENST00000480393 SOS2Q07890 1332 aaPredicted RBP35.59■■■■□ 3.29
TNFRSF25-213ENST00000480393 ABCC6O95255 1503 aa35.59■■■■□ 3.29
TNFRSF25-213ENST00000480393 KIAA0232Q92628 1395 aa35.58■■■■□ 3.29
TNFRSF25-213ENST00000480393 ERBB3P21860 1342 aa35.58■■■■□ 3.29
TNFRSF25-213ENST00000480393 RGPD5Q99666 1765 aa35.58■■■■□ 3.29
TNFRSF25-213ENST00000480393 MVPQ14764 893 aaKnown RBP35.58■■■■□ 3.29
TNFRSF25-213ENST00000480393 TSPYL4Q9UJ04 414 aa35.58■■■■□ 3.29
TNFRSF25-213ENST00000480393 KDM2BQ8NHM5 1336 aa35.58■■■■□ 3.29
TNFRSF25-213ENST00000480393 MRPL50Q8N5N7 158 aaKnown RBP35.57■■■■□ 3.28
TNFRSF25-213ENST00000480393 PLEKHO1Q53GL0 409 aaPredicted RBP35.56■■■■□ 3.28
TNFRSF25-213ENST00000480393 AMOTQ4VCS5 1084 aa35.53■■■■□ 3.28
TNFRSF25-213ENST00000480393 AEBP2Q6ZN18 517 aaPredicted RBP35.53■■■■□ 3.28
TNFRSF25-213ENST00000480393 CPDO75976 1380 aa35.53■■■■□ 3.28
TNFRSF25-213ENST00000480393 COL18A1P39060 1754 aa35.52■■■■□ 3.28
TNFRSF25-213ENST00000480393 MIS18AQ9NYP9 233 aa35.52■■■■□ 3.28
TNFRSF25-213ENST00000480393 LMO7Q8WWI1 1683 aa35.51■■■■□ 3.28
TNFRSF25-213ENST00000480393 ZNF530Q6P9A1 599 aaPredicted RBP35.51■■■■□ 3.27
TNFRSF25-213ENST00000480393 NHSL1Q5SYE7 1610 aa35.5■■■■□ 3.27
TNFRSF25-213ENST00000480393 ITPRIPQ8IWB1 547 aa35.5■■■■□ 3.27
TNFRSF25-213ENST00000480393 IL17REQ8NFR9 667 aa35.5■■■■□ 3.27
TNFRSF25-213ENST00000480393 ARHGAP45Q92619 1136 aa35.49■■■■□ 3.27
TNFRSF25-213ENST00000480393 TCERG1O14776 1098 aaKnown RBP35.49■■■■□ 3.27
TNFRSF25-213ENST00000480393 CHRNA2Q15822 529 aa35.49■■■■□ 3.27
TNFRSF25-213ENST00000480393 KRT24Q2M2I5 525 aa35.49■■■■□ 3.27
TNFRSF25-213ENST00000480393 NLRP2Q9NX02 1062 aa35.49■■■■□ 3.27
TNFRSF25-213ENST00000480393 DDX19BQ9UMR2 479 aa35.49■■■■□ 3.27
TNFRSF25-213ENST00000480393 CSB-PGBD3P0DP91 1061 aa35.48■■■■□ 3.27
TNFRSF25-213ENST00000480393 FAM208AQ9UK61 1670 aaKnown RBP35.47■■■■□ 3.27
TNFRSF25-213ENST00000480393 AKAP4Q5JQC9 854 aa35.47■■■■□ 3.27
TNFRSF25-213ENST00000480393 BABAM1Q9NWV8 329 aa35.46■■■■□ 3.27
TNFRSF25-213ENST00000480393 TAF7Q15545 349 aaPredicted RBP35.46■■■■□ 3.27
TNFRSF25-213ENST00000480393 C1orf141Q5JVX7 400 aa35.46■■■■□ 3.27
TNFRSF25-213ENST00000480393 TMEM57Q8N5G2 664 aa35.46■■■■□ 3.27
TNFRSF25-213ENST00000480393 CEMIPQ8WUJ3 1361 aa35.44■■■■□ 3.26
TNFRSF25-213ENST00000480393 RAPGEF4Q8WZA2 1011 aa35.42■■■■□ 3.26
TNFRSF25-213ENST00000480393 API5Q9BZZ5 524 aaKnown RBP35.42■■■■□ 3.26
TNFRSF25-213ENST00000480393 PRDM11Q9NQV5 511 aa35.4■■■■□ 3.26
TNFRSF25-213ENST00000480393 ABCA3Q99758 1704 aa35.4■■■■□ 3.26
TNFRSF25-213ENST00000480393 IGHDP01880 384 aa35.37■■■■□ 3.25
TNFRSF25-213ENST00000480393 TATP17735 454 aaPredicted RBP35.37■■■■□ 3.25
TNFRSF25-213ENST00000480393 RBM19Q9Y4C8 960 aaKnown RBP35.37■■■■□ 3.25
TNFRSF25-213ENST00000480393 PCDHB15Q9Y5E8 787 aa35.37■■■■□ 3.25
TNFRSF25-213ENST00000480393 OVOS2A0A0G2JMS6 1433 aa35.36■■■■□ 3.25
TNFRSF25-213ENST00000480393 TEFQ10587 303 aa35.36■■■■□ 3.25
TNFRSF25-213ENST00000480393 LGR6Q9HBX8 967 aa35.36■■■■□ 3.25
TNFRSF25-213ENST00000480393 ABCC4O15439 1325 aa35.36■■■■□ 3.25
TNFRSF25-213ENST00000480393 MPRIPQ6WCQ1 1025 aa35.35■■■■□ 3.25
TNFRSF25-213ENST00000480393 SOS1Q07889 1333 aaPredicted RBP35.34■■■■□ 3.25
TNFRSF25-213ENST00000480393 CHMP4BQ9H444 224 aaKnown RBP35.34■■■■□ 3.25
TNFRSF25-213ENST00000480393 LTBP4Q8N2S1 1624 aa35.34■■■■□ 3.25
TNFRSF25-213ENST00000480393 RNMTO43148 476 aaKnown RBP35.32■■■■□ 3.25
TNFRSF25-213ENST00000480393 RWDD1Q9H446 243 aaPredicted RBP35.32■■■■□ 3.25
TNFRSF25-213ENST00000480393 PLEKHG2Q9H7P9 1386 aa35.32■■■■□ 3.24
TNFRSF25-213ENST00000480393 ROBO1Q9Y6N7 1651 aa35.31■■■■□ 3.24
TNFRSF25-213ENST00000480393 SPG7Q9UQ90 795 aa35.31■■■■□ 3.24
TNFRSF25-213ENST00000480393 MEGF6O75095 1541 aa35.3■■■■□ 3.24
TNFRSF25-213ENST00000480393 PTPRCP08575 1304 aa35.3■■■■□ 3.24
TNFRSF25-213ENST00000480393 STK31Q9BXU1 1019 aa35.29■■■■□ 3.24
TNFRSF25-213ENST00000480393 SKAP1Q86WV1 359 aa35.29■■■■□ 3.24
TNFRSF25-213ENST00000480393 SLC4A2P04920 1241 aa35.28■■■■□ 3.24
TNFRSF25-213ENST00000480393 ZBTB40Q9NUA8 1239 aa35.28■■■■□ 3.24
TNFRSF25-213ENST00000480393 KDM3BQ7LBC6 1761 aa35.27■■■■□ 3.24
TNFRSF25-213ENST00000480393 CCDC30Q5VVM6 783 aa35.26■■■■□ 3.24
TNFRSF25-213ENST00000480393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.26■■■■□ 3.24
TNFRSF25-213ENST00000480393 WDR17Q8IZU2 1322 aa35.26■■■■□ 3.24
TNFRSF25-213ENST00000480393 VIRMAQ69YN4 1812 aaKnown RBP35.25■■■■□ 3.23
TNFRSF25-213ENST00000480393 BTBD11A6QL63 1104 aa35.25■■■■□ 3.23
TNFRSF25-213ENST00000480393 COL5A2P05997 1499 aaPredicted RBP35.25■■■■□ 3.23
TNFRSF25-213ENST00000480393 AHDC1Q5TGY3 1603 aaPredicted RBP35.24■■■■□ 3.23
TNFRSF25-213ENST00000480393 RGS12O14924 1447 aa35.22■■■■□ 3.23
TNFRSF25-213ENST00000480393 ADAMTS7Q9UKP4 1686 aa35.22■■■■□ 3.23
TNFRSF25-213ENST00000480393 TOM1L2Q6ZVM7 507 aa35.22■■■■□ 3.23
TNFRSF25-213ENST00000480393 PKD1L3Q7Z443 1732 aa35.2■■■■□ 3.23
TNFRSF25-213ENST00000480393 ZBTB7BO15156 539 aaPredicted RBP35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms