RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 NCAPD2Q15021 1401 aa14.86□□□□□ -0.03
CLDN11-205ENST00000480067 EXOC5O00471 708 aa14.85□□□□□ -0.03
CLDN11-205ENST00000480067 ZCRB1Q8TBF4 217 aaKnown RBP14.85□□□□□ -0.03
CLDN11-205ENST00000480067 DDB1Q16531 1140 aa14.84□□□□□ -0.03
CLDN11-205ENST00000480067 AMOTQ4VCS5 1084 aa14.84□□□□□ -0.03
CLDN11-205ENST00000480067 PLEKHO1Q53GL0 409 aaPredicted RBP14.84□□□□□ -0.03
CLDN11-205ENST00000480067 SEPT12Q8IYM1 358 aa14.84□□□□□ -0.03
CLDN11-205ENST00000480067 SPG7Q9UQ90 795 aa14.84□□□□□ -0.03
CLDN11-205ENST00000480067 RGPD2P0DJD1 1756 aa14.83□□□□□ -0.03
CLDN11-205ENST00000480067 MAPK8IP3Q9UPT6 1336 aa14.83□□□□□ -0.04
CLDN11-205ENST00000480067 CCDC146Q8IYE0 955 aa14.83□□□□□ -0.04
CLDN11-205ENST00000480067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.83□□□□□ -0.04
CLDN11-205ENST00000480067 RGPD1P0DJD0 1748 aa14.83□□□□□ -0.04
CLDN11-205ENST00000480067 ADRA2BP18089 450 aa14.82□□□□□ -0.04
CLDN11-205ENST00000480067 PDE3BQ13370 1112 aa14.82□□□□□ -0.04
CLDN11-205ENST00000480067 RUNDC1Q96C34 613 aa14.82□□□□□ -0.04
CLDN11-205ENST00000480067 PHACTR3Q96KR7 559 aa14.82□□□□□ -0.04
CLDN11-205ENST00000480067 PLEKHF1Q96S99 279 aa14.82□□□□□ -0.04
CLDN11-205ENST00000480067 MEGF6O75095 1541 aa14.82□□□□□ -0.04
CLDN11-205ENST00000480067 DISP2A7MBM2 1401 aa14.82□□□□□ -0.04
CLDN11-205ENST00000480067 GLI3P10071 1580 aa14.82□□□□□ -0.04
CLDN11-205ENST00000480067 DDX54Q8TDD1 881 aaKnown RBP14.81□□□□□ -0.04
CLDN11-205ENST00000480067 OVOS2A0A0G2JMS6 1433 aa14.8□□□□□ -0.04
CLDN11-205ENST00000480067 MTHFSDQ2M296 383 aaKnown RBP14.8□□□□□ -0.04
CLDN11-205ENST00000480067 GAS2L2Q8NHY3 880 aa14.8□□□□□ -0.04
CLDN11-205ENST00000480067 PLEKHG2Q9H7P9 1386 aa14.8□□□□□ -0.04
CLDN11-205ENST00000480067 C1orf141Q5JVX7 400 aa14.79□□□□□ -0.04
CLDN11-205ENST00000480067 ZNF530Q6P9A1 599 aaPredicted RBP14.79□□□□□ -0.04
CLDN11-205ENST00000480067 PCDH11XQ9BZA7 1347 aa14.79□□□□□ -0.04
CLDN11-205ENST00000480067 PCDH11YQ9BZA8 1340 aa14.79□□□□□ -0.04
CLDN11-205ENST00000480067 IFNL2Q8IZJ0 200 aa14.77□□□□□ -0.04
CLDN11-205ENST00000480067 APAF1O14727 1248 aa14.77□□□□□ -0.05
CLDN11-205ENST00000480067 CYP27B1O15528 508 aa14.77□□□□□ -0.05
CLDN11-205ENST00000480067 AKAP4Q5JQC9 854 aa14.77□□□□□ -0.05
CLDN11-205ENST00000480067 KRT27Q7Z3Y8 459 aa14.77□□□□□ -0.05
CLDN11-205ENST00000480067 TNS2Q63HR2 1409 aa14.76□□□□□ -0.05
CLDN11-205ENST00000480067 PHKG2P15735 406 aa14.76□□□□□ -0.05
CLDN11-205ENST00000480067 NEUROD2Q15784 382 aa14.76□□□□□ -0.05
CLDN11-205ENST00000480067 NFE2L2Q16236 605 aa14.76□□□□□ -0.05
CLDN11-205ENST00000480067 MARCH10Q8NA82 808 aaPredicted RBP14.76□□□□□ -0.05
CLDN11-205ENST00000480067 GNAT3A8MTJ3 354 aa14.75□□□□□ -0.05
CLDN11-205ENST00000480067 HSP90AB1P08238 724 aaKnown RBP14.75□□□□□ -0.05
CLDN11-205ENST00000480067 TMPOP42166 694 aaKnown RBP14.75□□□□□ -0.05
CLDN11-205ENST00000480067 RIPK4P57078 832 aa14.75□□□□□ -0.05
CLDN11-205ENST00000480067 RRP7AQ9Y3A4 280 aaKnown RBP14.75□□□□□ -0.05
CLDN11-205ENST00000480067 RGS12O14924 1447 aa14.75□□□□□ -0.05
CLDN11-205ENST00000480067 PARP4Q9UKK3 1724 aaKnown RBP14.74□□□□□ -0.05
CLDN11-205ENST00000480067 EP400Q96L91 3159 aa14.74□□□□□ -0.05
CLDN11-205ENST00000480067 RTF1Q92541 710 aaKnown RBP14.74□□□□□ -0.05
CLDN11-205ENST00000480067 THSD7AQ9UPZ6 1657 aa14.74□□□□□ -0.05
CLDN11-205ENST00000480067 FAM182BQ5T319 152 aa14.73□□□□□ -0.05
CLDN11-205ENST00000480067 SENP3-EIF4A1A0A087X0R7 540 aa14.73□□□□□ -0.05
CLDN11-205ENST00000480067 NKX1-1Q15270 411 aaPredicted RBP14.73□□□□□ -0.05
CLDN11-205ENST00000480067 MPRIPQ6WCQ1 1025 aa14.73□□□□□ -0.05
CLDN11-205ENST00000480067 DCAF5Q96JK2 942 aa14.73□□□□□ -0.05
CLDN11-205ENST00000480067 MAP3K5Q99683 1374 aa14.72□□□□□ -0.05
CLDN11-205ENST00000480067 HTATSF1O43719 755 aaKnown RBP14.72□□□□□ -0.05
CLDN11-205ENST00000480067 LMOD3Q0VAK6 560 aa14.72□□□□□ -0.05
CLDN11-205ENST00000480067 LRRC37A3O60309 1634 aa14.71□□□□□ -0.05
CLDN11-205ENST00000480067 FAM196AQ6ZSG2 479 aa14.71□□□□□ -0.05
CLDN11-205ENST00000480067 SALL2Q9Y467 1007 aaPredicted RBP14.71□□□□□ -0.05
CLDN11-205ENST00000480067 WNK3Q9BYP7 1800 aa14.7□□□□□ -0.06
CLDN11-205ENST00000480067 LGR6Q9HBX8 967 aa14.7□□□□□ -0.06
CLDN11-205ENST00000480067 PKD1L3Q7Z443 1732 aa14.7□□□□□ -0.06
CLDN11-205ENST00000480067 MCM10Q7L590 875 aa14.69□□□□□ -0.06
CLDN11-205ENST00000480067 NGEFQ8N5V2 710 aa14.69□□□□□ -0.06
CLDN11-205ENST00000480067 ERVV-2B6SEH9 535 aa14.68□□□□□ -0.06
CLDN11-205ENST00000480067 RNMTO43148 476 aaKnown RBP14.68□□□□□ -0.06
CLDN11-205ENST00000480067 DCTN1Q14203 1278 aa14.68□□□□□ -0.06
CLDN11-205ENST00000480067 IL17REQ8NFR9 667 aa14.68□□□□□ -0.06
CLDN11-205ENST00000480067 SYTL4Q96C24 671 aaPredicted RBP14.68□□□□□ -0.06
CLDN11-205ENST00000480067 PRIM1P49642 420 aaKnown RBP14.68□□□□□ -0.06
CLDN11-205ENST00000480067 CABP4P57796 275 aa14.68□□□□□ -0.06
CLDN11-205ENST00000480067 HNRNPUQ00839 825 aaKnown RBP eCLIP14.68□□□□□ -0.06
CLDN11-205ENST00000480067 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
CLDN11-205ENST00000480067 ACSBG1Q96GR2 724 aa14.68□□□□□ -0.06
CLDN11-205ENST00000480067 TRIM35Q9UPQ4 493 aa14.68□□□□□ -0.06
CLDN11-205ENST00000480067 TEFQ10587 303 aa14.67□□□□□ -0.06
CLDN11-205ENST00000480067 CCDC27Q2M243 656 aa14.67□□□□□ -0.06
CLDN11-205ENST00000480067 NFATC2IPQ8NCF5 419 aa14.66□□□□□ -0.06
CLDN11-205ENST00000480067 THUMPD2Q9BTF0 503 aaKnown RBP14.66□□□□□ -0.06
CLDN11-205ENST00000480067 BCL9O00512 1426 aa14.65□□□□□ -0.06
CLDN11-205ENST00000480067 KDM6AO15550 1401 aaPredicted RBP14.65□□□□□ -0.06
CLDN11-205ENST00000480067 CALD1Q05682 793 aaKnown RBP14.65□□□□□ -0.06
CLDN11-205ENST00000480067 WWC1Q8IX03 1113 aa14.65□□□□□ -0.06
CLDN11-205ENST00000480067 SLC52A2Q9HAB3 445 aa14.65□□□□□ -0.06
CLDN11-205ENST00000480067 TMOD3Q9NYL9 352 aa14.65□□□□□ -0.06
CLDN11-205ENST00000480067 CEMIPQ8WUJ3 1361 aa14.65□□□□□ -0.06
CLDN11-205ENST00000480067 KCNQ2O43526 872 aa14.64□□□□□ -0.07
CLDN11-205ENST00000480067 BRWD3Q6RI45 1802 aa14.64□□□□□ -0.07
CLDN11-205ENST00000480067 SHANK3Q9BYB0 1731 aa14.64□□□□□ -0.07
CLDN11-205ENST00000480067 TRIM37O94972 964 aa14.64□□□□□ -0.07
CLDN11-205ENST00000480067 BCL11BQ9C0K0 894 aaPredicted RBP14.64□□□□□ -0.07
CLDN11-205ENST00000480067 TAF7Q15545 349 aaPredicted RBP14.63□□□□□ -0.07
CLDN11-205ENST00000480067 PIGBQ92521 554 aa14.63□□□□□ -0.07
CLDN11-205ENST00000480067 WDR63Q8IWG1 891 aa14.62□□□□□ -0.07
CLDN11-205ENST00000480067 LAS1LQ9Y4W2 734 aaKnown RBP14.62□□□□□ -0.07
CLDN11-205ENST00000480067 BTBD11A6QL63 1104 aa14.61□□□□□ -0.07
CLDN11-205ENST00000480067 ILDR2Q71H61 639 aa14.61□□□□□ -0.07
CLDN11-205ENST00000480067 YTHDC1Q96MU7 727 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms