RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 IL2RBP14784 551 aa16.63■□□□□ 0.25
TRAPPC12-218ENST00000479897 RAPGEF4Q8WZA2 1011 aa16.63■□□□□ 0.25
TRAPPC12-218ENST00000479897 VIRMAQ69YN4 1812 aaKnown RBP16.62■□□□□ 0.25
TRAPPC12-218ENST00000479897 TATP17735 454 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC12-218ENST00000479897 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
TRAPPC12-218ENST00000479897 GJD4Q96KN9 370 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC12-218ENST00000479897 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
TRAPPC12-218ENST00000479897 NEFMP07197 916 aa16.61■□□□□ 0.25
TRAPPC12-218ENST00000479897 AMOTQ4VCS5 1084 aa16.61■□□□□ 0.25
TRAPPC12-218ENST00000479897 CCDC146Q8IYE0 955 aa16.6■□□□□ 0.25
TRAPPC12-218ENST00000479897 PHACTR3Q96KR7 559 aa16.6■□□□□ 0.25
TRAPPC12-218ENST00000479897 QTRT2Q9H974 415 aaKnown RBP16.6■□□□□ 0.25
TRAPPC12-218ENST00000479897 USP35Q9P2H5 1018 aa16.6■□□□□ 0.25
TRAPPC12-218ENST00000479897 ONECUT3O60422 494 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC12-218ENST00000479897 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
TRAPPC12-218ENST00000479897 GAS2L2Q8NHY3 880 aa16.59■□□□□ 0.25
TRAPPC12-218ENST00000479897 CCDC9Q9Y3X0 531 aaKnown RBP16.59■□□□□ 0.25
TRAPPC12-218ENST00000479897 PLEKHO1Q53GL0 409 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC12-218ENST00000479897 RGS17Q9UGC6 210 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC12-218ENST00000479897 SCN11AQ9UI33 1791 aa16.58■□□□□ 0.24
TRAPPC12-218ENST00000479897 PCDH11XQ9BZA7 1347 aa16.57■□□□□ 0.24
TRAPPC12-218ENST00000479897 PCDH11YQ9BZA8 1340 aa16.57■□□□□ 0.24
TRAPPC12-218ENST00000479897 RBM6P78332 1123 aaKnown RBP16.57■□□□□ 0.24
TRAPPC12-218ENST00000479897 NFE2L2Q16236 605 aa16.57■□□□□ 0.24
TRAPPC12-218ENST00000479897 SPG7Q9UQ90 795 aa16.57■□□□□ 0.24
TRAPPC12-218ENST00000479897 APAF1O14727 1248 aa16.56■□□□□ 0.24
TRAPPC12-218ENST00000479897 TMPOP42166 694 aaKnown RBP16.56■□□□□ 0.24
TRAPPC12-218ENST00000479897 MTHFSDQ2M296 383 aaKnown RBP16.56■□□□□ 0.24
TRAPPC12-218ENST00000479897 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC12-218ENST00000479897 BRWD3Q6RI45 1802 aa16.56■□□□□ 0.24
TRAPPC12-218ENST00000479897 MAP3K5Q99683 1374 aa16.55■□□□□ 0.24
TRAPPC12-218ENST00000479897 FAM98CQ17RN3 349 aaKnown RBP16.55■□□□□ 0.24
TRAPPC12-218ENST00000479897 CCDC27Q2M243 656 aa16.55■□□□□ 0.24
TRAPPC12-218ENST00000479897 ZCRB1Q8TBF4 217 aaKnown RBP16.55■□□□□ 0.24
TRAPPC12-218ENST00000479897 TOGARAM1Q9Y4F4 1720 aa16.54■□□□□ 0.24
TRAPPC12-218ENST00000479897 ZNF530Q6P9A1 599 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC12-218ENST00000479897 MRC1P22897 1456 aa16.54■□□□□ 0.24
TRAPPC12-218ENST00000479897 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC12-218ENST00000479897 HTATSF1O43719 755 aaKnown RBP16.53■□□□□ 0.24
TRAPPC12-218ENST00000479897 LMOD3Q0VAK6 560 aa16.53■□□□□ 0.24
TRAPPC12-218ENST00000479897 DDB1Q16531 1140 aa16.53■□□□□ 0.24
TRAPPC12-218ENST00000479897 AKAP4Q5JQC9 854 aa16.53■□□□□ 0.24
TRAPPC12-218ENST00000479897 EXOC5O00471 708 aa16.52■□□□□ 0.24
TRAPPC12-218ENST00000479897 CYP27B1O15528 508 aa16.52■□□□□ 0.24
TRAPPC12-218ENST00000479897 PHKG2P15735 406 aa16.52■□□□□ 0.24
TRAPPC12-218ENST00000479897 IFNL2Q8IZJ0 200 aa16.52■□□□□ 0.24
TRAPPC12-218ENST00000479897 DOT1LQ8TEK3 1739 aa16.52■□□□□ 0.24
TRAPPC12-218ENST00000479897 BCL9O00512 1426 aa16.52■□□□□ 0.23
TRAPPC12-218ENST00000479897 RGS12O14924 1447 aa16.52■□□□□ 0.23
TRAPPC12-218ENST00000479897 KDM6AO15550 1401 aaPredicted RBP16.52■□□□□ 0.23
TRAPPC12-218ENST00000479897 CEMIPQ8WUJ3 1361 aa16.51■□□□□ 0.23
TRAPPC12-218ENST00000479897 ZBED9Q6R2W3 1325 aa16.51■□□□□ 0.23
TRAPPC12-218ENST00000479897 ZNF521Q96K83 1311 aa16.51■□□□□ 0.23
TRAPPC12-218ENST00000479897 GNAT3A8MTJ3 354 aa16.51■□□□□ 0.23
TRAPPC12-218ENST00000479897 RIPK4P57078 832 aa16.51■□□□□ 0.23
TRAPPC12-218ENST00000479897 NKX1-1Q15270 411 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC12-218ENST00000479897 C1orf141Q5JVX7 400 aa16.51■□□□□ 0.23
TRAPPC12-218ENST00000479897 POTEAQ6S8J7 498 aa16.51■□□□□ 0.23
TRAPPC12-218ENST00000479897 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
TRAPPC12-218ENST00000479897 RXRBP28702 533 aa16.5■□□□□ 0.23
TRAPPC12-218ENST00000479897 HNRNPUQ00839 825 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRAPPC12-218ENST00000479897 TRIM35Q9UPQ4 493 aa16.5■□□□□ 0.23
TRAPPC12-218ENST00000479897 SEPT12Q8IYM1 358 aa16.49■□□□□ 0.23
TRAPPC12-218ENST00000479897 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
TRAPPC12-218ENST00000479897 ITGB4P16144 1822 aa16.49■□□□□ 0.23
TRAPPC12-218ENST00000479897 SBF2Q86WG5 1849 aa16.48■□□□□ 0.23
TRAPPC12-218ENST00000479897 NHSQ6T4R5 1651 aa16.48■□□□□ 0.23
TRAPPC12-218ENST00000479897 WWC1Q8IX03 1113 aa16.47■□□□□ 0.23
TRAPPC12-218ENST00000479897 DCAF5Q96JK2 942 aa16.47■□□□□ 0.23
TRAPPC12-218ENST00000479897 PAPPAQ13219 1627 aa16.47■□□□□ 0.23
TRAPPC12-218ENST00000479897 KDM3BQ7LBC6 1761 aa16.46■□□□□ 0.23
TRAPPC12-218ENST00000479897 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
TRAPPC12-218ENST00000479897 MARCH10Q8NA82 808 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC12-218ENST00000479897 RTF1Q92541 710 aaKnown RBP16.46■□□□□ 0.23
TRAPPC12-218ENST00000479897 A0A0G2JS52 829 aa16.45■□□□□ 0.22
TRAPPC12-218ENST00000479897 RNMTO43148 476 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-218ENST00000479897 MYT1Q01538 1121 aa16.45■□□□□ 0.22
TRAPPC12-218ENST00000479897 IL16Q14005 1332 aa16.45■□□□□ 0.22
TRAPPC12-218ENST00000479897 CALD1Q05682 793 aaKnown RBP16.44■□□□□ 0.22
TRAPPC12-218ENST00000479897 PDE3BQ13370 1112 aa16.44■□□□□ 0.22
TRAPPC12-218ENST00000479897 WDR63Q8IWG1 891 aa16.44■□□□□ 0.22
TRAPPC12-218ENST00000479897 IL17REQ8NFR9 667 aa16.44■□□□□ 0.22
TRAPPC12-218ENST00000479897 DDX54Q8TDD1 881 aaKnown RBP16.44■□□□□ 0.22
TRAPPC12-218ENST00000479897 MPRIPQ6WCQ1 1025 aa16.43■□□□□ 0.22
TRAPPC12-218ENST00000479897 UBR2Q8IWV8 1755 aa16.42■□□□□ 0.22
TRAPPC12-218ENST00000479897 ERVV-2B6SEH9 535 aa16.42■□□□□ 0.22
TRAPPC12-218ENST00000479897 MCM10Q7L590 875 aa16.42■□□□□ 0.22
TRAPPC12-218ENST00000479897 KRT27Q7Z3Y8 459 aa16.42■□□□□ 0.22
TRAPPC12-218ENST00000479897 DCTN1Q14203 1278 aa16.41■□□□□ 0.22
TRAPPC12-218ENST00000479897 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
TRAPPC12-218ENST00000479897 LGR6Q9HBX8 967 aa16.41■□□□□ 0.22
TRAPPC12-218ENST00000479897 BABAM1Q9NWV8 329 aa16.41■□□□□ 0.22
TRAPPC12-218ENST00000479897 SENP3-EIF4A1A0A087X0R7 540 aa16.4■□□□□ 0.22
TRAPPC12-218ENST00000479897 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
TRAPPC12-218ENST00000479897 SALL2Q9Y467 1007 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC12-218ENST00000479897 CICQ96RK0 1608 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC12-218ENST00000479897 ZNF853P0CG23 659 aa16.39■□□□□ 0.21
TRAPPC12-218ENST00000479897 GOLGA2Q08379 1002 aa16.39■□□□□ 0.21
TRAPPC12-218ENST00000479897 TEFQ10587 303 aa16.39■□□□□ 0.21
TRAPPC12-218ENST00000479897 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms