RNA–Protein interactions for RNA: ENST00000479820.1

SEMA6C-206, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-206ENST00000479820 NBPF6Q5VWK0 638 aa21.12■□□□□ 0.97
SEMA6C-206ENST00000479820 NBPF4Q96M43 638 aa21.12■□□□□ 0.97
SEMA6C-206ENST00000479820 TXNRD1Q16881 649 aa21.11■□□□□ 0.97
SEMA6C-206ENST00000479820 TUBGCP6Q96RT7 1819 aa21.11■□□□□ 0.97
SEMA6C-206ENST00000479820 HSP90AB2PQ58FF8 381 aa21.1■□□□□ 0.97
SEMA6C-206ENST00000479820 ACSBG1Q96GR2 724 aa21.1■□□□□ 0.97
SEMA6C-206ENST00000479820 TOGARAM1Q9Y4F4 1720 aa21.09■□□□□ 0.97
SEMA6C-206ENST00000479820 ITGB4P16144 1822 aa21.09■□□□□ 0.97
SEMA6C-206ENST00000479820 EMILIN1Q9Y6C2 1016 aa21.09■□□□□ 0.97
SEMA6C-206ENST00000479820 NSD2O96028 1365 aa21.09■□□□□ 0.97
SEMA6C-206ENST00000479820 ZCRB1Q8TBF4 217 aaKnown RBP21.07■□□□□ 0.96
SEMA6C-206ENST00000479820 COL24A1Q17RW2 1714 aa21.07■□□□□ 0.96
SEMA6C-206ENST00000479820 DDX54Q8TDD1 881 aaKnown RBP21.06■□□□□ 0.96
SEMA6C-206ENST00000479820 WASHC2AQ641Q2 1341 aa21.05■□□□□ 0.96
SEMA6C-206ENST00000479820 USHBP1Q8N6Y0 703 aa21.05■□□□□ 0.96
SEMA6C-206ENST00000479820 TAF1LQ8IZX4 1826 aa21.04■□□□□ 0.96
SEMA6C-206ENST00000479820 SLC15A2Q16348 729 aa21.03■□□□□ 0.96
SEMA6C-206ENST00000479820 POLKQ9UBT6 870 aa21.03■□□□□ 0.96
SEMA6C-206ENST00000479820 RAPGEF4Q8WZA2 1011 aa21.02■□□□□ 0.96
SEMA6C-206ENST00000479820 SPON1Q9HCB6 807 aa21.02■□□□□ 0.96
SEMA6C-206ENST00000479820 PLEKHG2Q9H7P9 1386 aa21.01■□□□□ 0.95
SEMA6C-206ENST00000479820 PANK3Q9H999 370 aa21.01■□□□□ 0.95
SEMA6C-206ENST00000479820 STK32BQ9NY57 414 aa21.01■□□□□ 0.95
SEMA6C-206ENST00000479820 PCDH11XQ9BZA7 1347 aa21.01■□□□□ 0.95
SEMA6C-206ENST00000479820 PCDH11YQ9BZA8 1340 aa21.01■□□□□ 0.95
SEMA6C-206ENST00000479820 C5P01031 1676 aa21■□□□□ 0.95
SEMA6C-206ENST00000479820 TATP17735 454 aaPredicted RBP21■□□□□ 0.95
SEMA6C-206ENST00000479820 POLR3GLQ9BT43 218 aa21■□□□□ 0.95
SEMA6C-206ENST00000479820 PDGFDQ9GZP0 370 aaPredicted RBP21■□□□□ 0.95
SEMA6C-206ENST00000479820 LRRC4BQ9NT99 713 aa21■□□□□ 0.95
SEMA6C-206ENST00000479820 SLC27A3Q5K4L6 730 aa20.99■□□□□ 0.95
SEMA6C-206ENST00000479820 PRIM1P49642 420 aaKnown RBP20.98■□□□□ 0.95
SEMA6C-206ENST00000479820 CYP27B1O15528 508 aa20.96■□□□□ 0.95
SEMA6C-206ENST00000479820 ZNF827Q17R98 1081 aa20.96■□□□□ 0.95
SEMA6C-206ENST00000479820 EYA1Q99502 592 aa20.96■□□□□ 0.95
SEMA6C-206ENST00000479820 AKT1S1Q96B36 256 aa20.95■□□□□ 0.94
SEMA6C-206ENST00000479820 KIF7Q2M1P5 1343 aa20.95■□□□□ 0.94
SEMA6C-206ENST00000479820 PPM1GO15355 546 aaPredicted RBP20.94■□□□□ 0.94
SEMA6C-206ENST00000479820 PTGER2P43116 358 aa20.94■□□□□ 0.94
SEMA6C-206ENST00000479820 EIF4A2Q14240 407 aaKnown RBP20.93■□□□□ 0.94
SEMA6C-206ENST00000479820 SYTL4Q96C24 671 aaPredicted RBP20.93■□□□□ 0.94
SEMA6C-206ENST00000479820 SGIP1Q9BQI5 828 aa20.93■□□□□ 0.94
SEMA6C-206ENST00000479820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.93■□□□□ 0.94
SEMA6C-206ENST00000479820 ZBTB7AO95365 584 aa20.92■□□□□ 0.94
SEMA6C-206ENST00000479820 NKX1-1Q15270 411 aaPredicted RBP20.92■□□□□ 0.94
SEMA6C-206ENST00000479820 MTFR1LQ9H019 292 aa20.92■□□□□ 0.94
SEMA6C-206ENST00000479820 IGSF1Q8N6C5 1336 aa20.92■□□□□ 0.94
SEMA6C-206ENST00000479820 TNNT2P45379 298 aaPredicted RBP20.9■□□□□ 0.94
SEMA6C-206ENST00000479820 AMER1Q5JTC6 1135 aaPredicted RBP20.9■□□□□ 0.94
SEMA6C-206ENST00000479820 UBR3Q6ZT12 1888 aa20.9■□□□□ 0.94
SEMA6C-206ENST00000479820 PPP1R1BQ9UD71 204 aaPredicted RBP20.89■□□□□ 0.93
SEMA6C-206ENST00000479820 ZNF831Q5JPB2 1677 aa20.89■□□□□ 0.93
SEMA6C-206ENST00000479820 VIRMAQ69YN4 1812 aaKnown RBP20.88■□□□□ 0.93
SEMA6C-206ENST00000479820 C4BP0C0L5 1744 aa20.88■□□□□ 0.93
SEMA6C-206ENST00000479820 KNSTRNQ9Y448 316 aa20.88■□□□□ 0.93
SEMA6C-206ENST00000479820 PNPLA7Q6ZV29 1317 aa20.87■□□□□ 0.93
SEMA6C-206ENST00000479820 SPG7Q9UQ90 795 aa20.87■□□□□ 0.93
SEMA6C-206ENST00000479820 PALLDQ8WX93 1383 aa20.86■□□□□ 0.93
SEMA6C-206ENST00000479820 MORC1Q86VD1 984 aa20.86■□□□□ 0.93
SEMA6C-206ENST00000479820 CCNL1Q9UK58 526 aaPredicted RBP20.86■□□□□ 0.93
SEMA6C-206ENST00000479820 PER1O15534 1290 aaPredicted RBP20.85■□□□□ 0.93
SEMA6C-206ENST00000479820 KCNQ4P56696 695 aa20.85■□□□□ 0.93
SEMA6C-206ENST00000479820 SLC16A10Q8TF71 515 aa20.85■□□□□ 0.93
SEMA6C-206ENST00000479820 ATF5Q9Y2D1 282 aaPredicted RBP20.85■□□□□ 0.93
SEMA6C-206ENST00000479820 SCN11AQ9UI33 1791 aa20.85■□□□□ 0.93
SEMA6C-206ENST00000479820 KDRP35968 1356 aa20.85■□□□□ 0.93
SEMA6C-206ENST00000479820 MAP3K5Q99683 1374 aa20.85■□□□□ 0.93
SEMA6C-206ENST00000479820 PHKG2P15735 406 aa20.83■□□□□ 0.93
SEMA6C-206ENST00000479820 NPC1L1Q9UHC9 1359 aa20.83■□□□□ 0.92
SEMA6C-206ENST00000479820 IFNL2Q8IZJ0 200 aa20.82■□□□□ 0.92
SEMA6C-206ENST00000479820 UTRNP46939 3433 aa20.82■□□□□ 0.92
SEMA6C-206ENST00000479820 COL5A3P25940 1745 aaPredicted RBP20.81■□□□□ 0.92
SEMA6C-206ENST00000479820 MPRIPQ6WCQ1 1025 aa20.81■□□□□ 0.92
SEMA6C-206ENST00000479820 PIGBQ92521 554 aa20.81■□□□□ 0.92
SEMA6C-206ENST00000479820 SMARCC1Q92922 1105 aaPredicted RBP20.81■□□□□ 0.92
SEMA6C-206ENST00000479820 CHD4Q14839 1912 aa20.8■□□□□ 0.92
SEMA6C-206ENST00000479820 CICQ96RK0 1608 aaPredicted RBP20.8■□□□□ 0.92
SEMA6C-206ENST00000479820 HMGB2P26583 209 aaKnown RBP20.8■□□□□ 0.92
SEMA6C-206ENST00000479820 TFCP2L1Q9NZI6 479 aa20.8■□□□□ 0.92
SEMA6C-206ENST00000479820 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
SEMA6C-206ENST00000479820 IL13P35225 146 aa20.78■□□□□ 0.92
SEMA6C-206ENST00000479820 ADAMTS7Q9UKP4 1686 aa20.77■□□□□ 0.92
SEMA6C-206ENST00000479820 ARXQ96QS3 562 aa20.77■□□□□ 0.92
SEMA6C-206ENST00000479820 SYT17Q9BSW7 474 aa20.77■□□□□ 0.92
SEMA6C-206ENST00000479820 FHDC1Q9C0D6 1143 aaPredicted RBP20.77■□□□□ 0.92
SEMA6C-206ENST00000479820 COL3A1P02461 1466 aaPredicted RBP20.76■□□□□ 0.91
SEMA6C-206ENST00000479820 AEBP1Q8IUX7 1158 aa20.76■□□□□ 0.91
SEMA6C-206ENST00000479820 AMOTQ4VCS5 1084 aa20.75■□□□□ 0.91
SEMA6C-206ENST00000479820 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
SEMA6C-206ENST00000479820 HSP90AB1P08238 724 aaKnown RBP20.74■□□□□ 0.91
SEMA6C-206ENST00000479820 PLEKHO1Q53GL0 409 aaPredicted RBP20.74■□□□□ 0.91
SEMA6C-206ENST00000479820 COL23A1Q86Y22 540 aaPredicted RBP20.74■□□□□ 0.91
SEMA6C-206ENST00000479820 MYH14Q7Z406 1995 aaKnown RBP20.74■□□□□ 0.91
SEMA6C-206ENST00000479820 ERVV-2B6SEH9 535 aa20.73■□□□□ 0.91
SEMA6C-206ENST00000479820 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
SEMA6C-206ENST00000479820 LOC102724428A0A0B4J2F2 783 aa20.72■□□□□ 0.91
SEMA6C-206ENST00000479820 MTHFSP49914 203 aa20.72■□□□□ 0.91
SEMA6C-206ENST00000479820 SIK1P57059 783 aa20.72■□□□□ 0.91
SEMA6C-206ENST00000479820 ASAP1Q9ULH1 1129 aa20.72■□□□□ 0.91
SEMA6C-206ENST00000479820 TJP1Q07157 1748 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms