RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 INTS6LQ5JSJ4 861 aaKnown RBP9.56□□□□□ -0.88
BRAF-203ENST00000479537 RC3H1Q5TC82 1133 aaKnown RBP9.56□□□□□ -0.88
BRAF-203ENST00000479537 CCDC102BQ68D86 513 aa9.56□□□□□ -0.88
BRAF-203ENST00000479537 KIAA1024Q9UPX6 916 aa9.56□□□□□ -0.88
BRAF-203ENST00000479537 MAP4K5Q9Y4K4 846 aa9.56□□□□□ -0.88
BRAF-203ENST00000479537 SEC13P55735 322 aa9.55□□□□□ -0.88
BRAF-203ENST00000479537 ATP2B4P23634 1241 aa9.54□□□□□ -0.88
BRAF-203ENST00000479537 FSHRP23945 695 aa9.54□□□□□ -0.88
BRAF-203ENST00000479537 SWI5Q1ZZU3 235 aa9.54□□□□□ -0.88
BRAF-203ENST00000479537 SIX5Q8N196 739 aa9.54□□□□□ -0.88
BRAF-203ENST00000479537 CLP1Q92989 425 aaKnown RBP9.54□□□□□ -0.88
BRAF-203ENST00000479537 SFI1A8K8P3 1242 aa9.53□□□□□ -0.88
BRAF-203ENST00000479537 ERVH48-1M5A8F1 160 aa9.53□□□□□ -0.88
BRAF-203ENST00000479537 ZBTB7BO15156 539 aaPredicted RBP9.53□□□□□ -0.88
BRAF-203ENST00000479537 TLL2Q9Y6L7 1015 aa9.53□□□□□ -0.88
BRAF-203ENST00000479537 CCER1Q8TC90 406 aaPredicted RBP9.52□□□□□ -0.89
BRAF-203ENST00000479537 TRIM52Q96A61 297 aa9.52□□□□□ -0.89
BRAF-203ENST00000479537 HINFPQ9BQA5 517 aa9.52□□□□□ -0.89
BRAF-203ENST00000479537 PCDHGA11Q9Y5H2 935 aa9.52□□□□□ -0.89
BRAF-203ENST00000479537 PRMT3O60678 531 aa9.51□□□□□ -0.89
BRAF-203ENST00000479537 MFAP1P55081 439 aaKnown RBP9.51□□□□□ -0.89
BRAF-203ENST00000479537 FAM69CQ0P6D2 419 aa9.51□□□□□ -0.89
BRAF-203ENST00000479537 SPRYD7Q5W111 196 aa9.51□□□□□ -0.89
BRAF-203ENST00000479537 CYLDQ9NQC7 956 aa9.51□□□□□ -0.89
BRAF-203ENST00000479537 SSFA2P28290 1259 aa9.5□□□□□ -0.89
BRAF-203ENST00000479537 SCTRP47872 440 aa9.5□□□□□ -0.89
BRAF-203ENST00000479537 DHX9Q08211 1270 aaKnown RBP9.5□□□□□ -0.89
BRAF-203ENST00000479537 V9GY48 417 aaPredicted RBP9.5□□□□□ -0.89
BRAF-203ENST00000479537 LGR5O75473 907 aa9.49□□□□□ -0.89
BRAF-203ENST00000479537 ARID4AP29374 1257 aaPredicted RBP9.49□□□□□ -0.89
BRAF-203ENST00000479537 CC2D2BQ6DHV5 1058 aa9.49□□□□□ -0.89
BRAF-203ENST00000479537 CDK15Q96Q40 435 aa9.49□□□□□ -0.89
BRAF-203ENST00000479537 TMPRSS4Q9NRS4 437 aa9.49□□□□□ -0.89
BRAF-203ENST00000479537 SLAIN2Q9P270 581 aa9.49□□□□□ -0.89
BRAF-203ENST00000479537 RANGAP1P46060 587 aaPredicted RBP9.48□□□□□ -0.89
BRAF-203ENST00000479537 ZNF697Q5TEC3 545 aa9.48□□□□□ -0.89
BRAF-203ENST00000479537 PHLDB3Q6NSJ2 640 aa9.48□□□□□ -0.89
BRAF-203ENST00000479537 NPM2Q86SE8 214 aaKnown RBP9.48□□□□□ -0.89
BRAF-203ENST00000479537 PRIMPOLQ96LW4 560 aa9.48□□□□□ -0.89
BRAF-203ENST00000479537 GNEQ9Y223 722 aaKnown RBP9.48□□□□□ -0.89
BRAF-203ENST00000479537 DKK1O94907 266 aa9.47□□□□□ -0.89
BRAF-203ENST00000479537 ADH1CP00326 375 aa9.47□□□□□ -0.89
BRAF-203ENST00000479537 FOXC1Q12948 553 aa9.47□□□□□ -0.89
BRAF-203ENST00000479537 SND1Q7KZF4 910 aaKnown RBP eCLIP9.47□□□□□ -0.89
BRAF-203ENST00000479537 ZNF598Q86UK7 904 aaKnown RBP9.47□□□□□ -0.89
BRAF-203ENST00000479537 CCDC116Q8IYX3 515 aa9.47□□□□□ -0.89
BRAF-203ENST00000479537 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
BRAF-203ENST00000479537 MTMR7Q9Y216 660 aa9.47□□□□□ -0.89
BRAF-203ENST00000479537 WNT7AO00755 349 aa9.46□□□□□ -0.9
BRAF-203ENST00000479537 ERVK-9P63128 1117 aa9.46□□□□□ -0.9
BRAF-203ENST00000479537 CCDC27Q2M243 656 aa9.46□□□□□ -0.9
BRAF-203ENST00000479537 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
BRAF-203ENST00000479537 TSEN2Q8NCE0 465 aaKnown RBP9.46□□□□□ -0.9
BRAF-203ENST00000479537 MRGPRX2Q96LB1 330 aa9.46□□□□□ -0.9
BRAF-203ENST00000479537 RGS20O76081 388 aa9.45□□□□□ -0.9
BRAF-203ENST00000479537 GRM5P41594 1212 aa9.45□□□□□ -0.9
BRAF-203ENST00000479537 MYT1Q01538 1121 aa9.45□□□□□ -0.9
BRAF-203ENST00000479537 NR5A1Q13285 461 aa9.45□□□□□ -0.9
BRAF-203ENST00000479537 PPP1R26Q5T8A7 1209 aaPredicted RBP9.45□□□□□ -0.9
BRAF-203ENST00000479537 TXNDC2Q86VQ3 553 aa9.45□□□□□ -0.9
BRAF-203ENST00000479537 ZNF358Q9NW07 568 aa9.45□□□□□ -0.9
BRAF-203ENST00000479537 SIAH2O43255 324 aa9.44□□□□□ -0.9
BRAF-203ENST00000479537 MPNDQ8N594 471 aa9.44□□□□□ -0.9
BRAF-203ENST00000479537 OSBPL3Q9H4L5 887 aa9.44□□□□□ -0.9
BRAF-203ENST00000479537 PGPEP1Q9NXJ5 209 aa9.44□□□□□ -0.9
BRAF-203ENST00000479537 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
BRAF-203ENST00000479537 ALDH1A1P00352 501 aa9.43□□□□□ -0.9
BRAF-203ENST00000479537 SCNN1AP37088 669 aa9.43□□□□□ -0.9
BRAF-203ENST00000479537 GDF10P55107 478 aa9.43□□□□□ -0.9
BRAF-203ENST00000479537 CYP2U1Q7Z449 544 aa9.43□□□□□ -0.9
BRAF-203ENST00000479537 SERTAD1Q9UHV2 236 aa9.43□□□□□ -0.9
BRAF-203ENST00000479537 WASF2Q9Y6W5 498 aa9.43□□□□□ -0.9
BRAF-203ENST00000479537 TNFRSF10AO00220 468 aa9.42□□□□□ -0.9
BRAF-203ENST00000479537 BACH1O14867 736 aa9.42□□□□□ -0.9
BRAF-203ENST00000479537 STAU1O95793 577 aaKnown RBP9.42□□□□□ -0.9
BRAF-203ENST00000479537 ABL1P00519 1130 aa9.42□□□□□ -0.9
BRAF-203ENST00000479537 SERPINB4P48594 390 aa9.42□□□□□ -0.9
BRAF-203ENST00000479537 MKNK1Q9BUB5 465 aa9.42□□□□□ -0.9
BRAF-203ENST00000479537 M0R2N6 131 aa9.41□□□□□ -0.9
BRAF-203ENST00000479537 PKD2L1Q9P0L9 805 aa9.41□□□□□ -0.9
BRAF-203ENST00000479537 EMILIN1Q9Y6C2 1016 aa9.41□□□□□ -0.9
BRAF-203ENST00000479537 TMEM229AB2RXF0 380 aa9.4□□□□□ -0.9
BRAF-203ENST00000479537 NR3C2P08235 984 aa9.4□□□□□ -0.9
BRAF-203ENST00000479537 OCLNQ16625 522 aa9.4□□□□□ -0.9
BRAF-203ENST00000479537 C1orf216Q8TAB5 229 aa9.4□□□□□ -0.9
BRAF-203ENST00000479537 BIN2Q9UBW5 565 aaPredicted RBP9.4□□□□□ -0.9
BRAF-203ENST00000479537 NNTQ13423 1086 aa9.39□□□□□ -0.91
BRAF-203ENST00000479537 TNS4Q8IZW8 715 aa9.39□□□□□ -0.91
BRAF-203ENST00000479537 RGS22Q8NE09 1264 aa9.39□□□□□ -0.91
BRAF-203ENST00000479537 RAB6BQ9NRW1 208 aa9.39□□□□□ -0.91
BRAF-203ENST00000479537 GDF9O60383 454 aa9.38□□□□□ -0.91
BRAF-203ENST00000479537 LILRA1O75019 489 aa9.38□□□□□ -0.91
BRAF-203ENST00000479537 GNRH1P01148 92 aa9.38□□□□□ -0.91
BRAF-203ENST00000479537 INHAP05111 366 aa9.38□□□□□ -0.91
BRAF-203ENST00000479537 SCNN1DP51172 638 aa9.38□□□□□ -0.91
BRAF-203ENST00000479537 ESCO1Q5FWF5 840 aa9.38□□□□□ -0.91
BRAF-203ENST00000479537 FOXD4L5Q5VV16 416 aaPredicted RBP9.38□□□□□ -0.91
BRAF-203ENST00000479537 SCG3Q8WXD2 468 aaKnown RBP9.38□□□□□ -0.91
BRAF-203ENST00000479537 FOXD4L4Q8WXT5 416 aaPredicted RBP9.38□□□□□ -0.91
BRAF-203ENST00000479537 VTI1AQ96AJ9 217 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms