RNA–Protein interactions for RNA: ENST00000479448.1

LAMB1-212, Transcript of laminin subunit beta 1, humanhuman

TSL 3

Gene LAMB1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-212ENST00000479448 GAS2L2Q8NHY3 880 aa17.17■□□□□ 0.34
LAMB1-212ENST00000479448 GJD4Q96KN9 370 aaPredicted RBP17.17■□□□□ 0.34
LAMB1-212ENST00000479448 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
LAMB1-212ENST00000479448 NCAPD2Q15021 1401 aa17.16■□□□□ 0.34
LAMB1-212ENST00000479448 FAM98CQ17RN3 349 aaKnown RBP17.15■□□□□ 0.34
LAMB1-212ENST00000479448 DLG5Q8TDM6 1919 aa17.15■□□□□ 0.34
LAMB1-212ENST00000479448 PKD1L3Q7Z443 1732 aa17.15■□□□□ 0.34
LAMB1-212ENST00000479448 MEGF6O75095 1541 aa17.15■□□□□ 0.34
LAMB1-212ENST00000479448 HNRNPUQ00839 825 aaKnown RBP eCLIP17.14■□□□□ 0.33
LAMB1-212ENST00000479448 LMOD3Q0VAK6 560 aa17.14■□□□□ 0.33
LAMB1-212ENST00000479448 NEUROD2Q15784 382 aa17.14■□□□□ 0.33
LAMB1-212ENST00000479448 ZNF530Q6P9A1 599 aaPredicted RBP17.14■□□□□ 0.33
LAMB1-212ENST00000479448 BARGINQ6ZT62 677 aa17.14■□□□□ 0.33
LAMB1-212ENST00000479448 PLEKHG2Q9H7P9 1386 aa17.14■□□□□ 0.33
LAMB1-212ENST00000479448 OVOS2A0A0G2JMS6 1433 aa17.13■□□□□ 0.33
LAMB1-212ENST00000479448 EXOC5O00471 708 aa17.13■□□□□ 0.33
LAMB1-212ENST00000479448 APAF1O14727 1248 aa17.13■□□□□ 0.33
LAMB1-212ENST00000479448 RBM6P78332 1123 aaKnown RBP17.13■□□□□ 0.33
LAMB1-212ENST00000479448 DDB1Q16531 1140 aa17.13■□□□□ 0.33
LAMB1-212ENST00000479448 ZCRB1Q8TBF4 217 aaKnown RBP17.13■□□□□ 0.33
LAMB1-212ENST00000479448 RTF1Q92541 710 aaKnown RBP17.13■□□□□ 0.33
LAMB1-212ENST00000479448 GLI3P10071 1580 aa17.13■□□□□ 0.33
LAMB1-212ENST00000479448 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
LAMB1-212ENST00000479448 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
LAMB1-212ENST00000479448 LRRC37A3O60309 1634 aa17.12■□□□□ 0.33
LAMB1-212ENST00000479448 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
LAMB1-212ENST00000479448 VIRMAQ69YN4 1812 aaKnown RBP17.12■□□□□ 0.33
LAMB1-212ENST00000479448 RXRBP28702 533 aa17.11■□□□□ 0.33
LAMB1-212ENST00000479448 NFE2L2Q16236 605 aa17.11■□□□□ 0.33
LAMB1-212ENST00000479448 PLEKHF1Q96S99 279 aa17.11■□□□□ 0.33
LAMB1-212ENST00000479448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.11■□□□□ 0.33
LAMB1-212ENST00000479448 RRP7AQ9Y3A4 280 aaKnown RBP17.11■□□□□ 0.33
LAMB1-212ENST00000479448 KAT6BQ8WYB5 2073 aa17.1■□□□□ 0.33
LAMB1-212ENST00000479448 SENP3-EIF4A1A0A087X0R7 540 aa17.1■□□□□ 0.33
LAMB1-212ENST00000479448 RIPK4P57078 832 aa17.1■□□□□ 0.33
LAMB1-212ENST00000479448 PDE3BQ13370 1112 aa17.1■□□□□ 0.33
LAMB1-212ENST00000479448 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
LAMB1-212ENST00000479448 DDX54Q8TDD1 881 aaKnown RBP17.1■□□□□ 0.33
LAMB1-212ENST00000479448 PHACTR3Q96KR7 559 aa17.1■□□□□ 0.33
LAMB1-212ENST00000479448 TNS2Q63HR2 1409 aa17.1■□□□□ 0.33
LAMB1-212ENST00000479448 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
LAMB1-212ENST00000479448 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
LAMB1-212ENST00000479448 IFNL2Q8IZJ0 200 aa17.09■□□□□ 0.33
LAMB1-212ENST00000479448 NGEFQ8N5V2 710 aa17.09■□□□□ 0.33
LAMB1-212ENST00000479448 MAP3K5Q99683 1374 aa17.09■□□□□ 0.33
LAMB1-212ENST00000479448 DISP2A7MBM2 1401 aa17.09■□□□□ 0.33
LAMB1-212ENST00000479448 THSD7AQ9UPZ6 1657 aa17.08■□□□□ 0.32
LAMB1-212ENST00000479448 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
LAMB1-212ENST00000479448 AKAP4Q5JQC9 854 aa17.08■□□□□ 0.32
LAMB1-212ENST00000479448 SHANK3Q9BYB0 1731 aa17.07■□□□□ 0.32
LAMB1-212ENST00000479448 CALD1Q05682 793 aaKnown RBP17.06■□□□□ 0.32
LAMB1-212ENST00000479448 SEPT12Q8IYM1 358 aa17.06■□□□□ 0.32
LAMB1-212ENST00000479448 PHKG2P15735 406 aa17.04■□□□□ 0.32
LAMB1-212ENST00000479448 BRWD3Q6RI45 1802 aa17.04■□□□□ 0.32
LAMB1-212ENST00000479448 SCN11AQ9UI33 1791 aa17.04■□□□□ 0.32
LAMB1-212ENST00000479448 HTATSF1O43719 755 aaKnown RBP17.03■□□□□ 0.32
LAMB1-212ENST00000479448 TEFQ10587 303 aa17.02■□□□□ 0.32
LAMB1-212ENST00000479448 MPRIPQ6WCQ1 1025 aa17.02■□□□□ 0.32
LAMB1-212ENST00000479448 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
LAMB1-212ENST00000479448 POTEAQ6S8J7 498 aa17.01■□□□□ 0.31
LAMB1-212ENST00000479448 DCAF5Q96JK2 942 aa17.01■□□□□ 0.31
LAMB1-212ENST00000479448 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
LAMB1-212ENST00000479448 ZBED9Q6R2W3 1325 aa17■□□□□ 0.31
LAMB1-212ENST00000479448 CYP27B1O15528 508 aa17■□□□□ 0.31
LAMB1-212ENST00000479448 CCDC27Q2M243 656 aa17■□□□□ 0.31
LAMB1-212ENST00000479448 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
LAMB1-212ENST00000479448 MCM10Q7L590 875 aa17■□□□□ 0.31
LAMB1-212ENST00000479448 KRT27Q7Z3Y8 459 aa17■□□□□ 0.31
LAMB1-212ENST00000479448 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
LAMB1-212ENST00000479448 ONECUT3O60422 494 aaPredicted RBP16.99■□□□□ 0.31
LAMB1-212ENST00000479448 SYTL4Q96C24 671 aaPredicted RBP16.99■□□□□ 0.31
LAMB1-212ENST00000479448 RGS12O14924 1447 aa16.98■□□□□ 0.31
LAMB1-212ENST00000479448 RNMTO43148 476 aaKnown RBP16.98■□□□□ 0.31
LAMB1-212ENST00000479448 CABP4P57796 275 aa16.98■□□□□ 0.31
LAMB1-212ENST00000479448 DCTN1Q14203 1278 aa16.98■□□□□ 0.31
LAMB1-212ENST00000479448 WWC1Q8IX03 1113 aa16.98■□□□□ 0.31
LAMB1-212ENST00000479448 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
LAMB1-212ENST00000479448 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
LAMB1-212ENST00000479448 ITGB4P16144 1822 aa16.97■□□□□ 0.31
LAMB1-212ENST00000479448 GOLGA2Q08379 1002 aa16.96■□□□□ 0.31
LAMB1-212ENST00000479448 WDR63Q8IWG1 891 aa16.96■□□□□ 0.31
LAMB1-212ENST00000479448 MARCH10Q8NA82 808 aaPredicted RBP16.96■□□□□ 0.31
LAMB1-212ENST00000479448 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
LAMB1-212ENST00000479448 GNAI1P63096 354 aa16.95■□□□□ 0.3
LAMB1-212ENST00000479448 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
LAMB1-212ENST00000479448 TOGARAM1Q9Y4F4 1720 aa16.95■□□□□ 0.3
LAMB1-212ENST00000479448 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
LAMB1-212ENST00000479448 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
LAMB1-212ENST00000479448 ERVV-2B6SEH9 535 aa16.94■□□□□ 0.3
LAMB1-212ENST00000479448 NKX1-1Q15270 411 aaPredicted RBP16.94■□□□□ 0.3
LAMB1-212ENST00000479448 LGR6Q9HBX8 967 aa16.94■□□□□ 0.3
LAMB1-212ENST00000479448 SIPA1L3O60292 1781 aaPredicted RBP16.93■□□□□ 0.3
LAMB1-212ENST00000479448 FAM196AQ6ZSG2 479 aa16.93■□□□□ 0.3
LAMB1-212ENST00000479448 TTC5Q8N0Z6 440 aa16.93■□□□□ 0.3
LAMB1-212ENST00000479448 IL17REQ8NFR9 667 aa16.93■□□□□ 0.3
LAMB1-212ENST00000479448 ACSBG1Q96GR2 724 aa16.93■□□□□ 0.3
LAMB1-212ENST00000479448 SLC52A2Q9HAB3 445 aa16.93■□□□□ 0.3
LAMB1-212ENST00000479448 TSPYL4Q9UJ04 414 aa16.93■□□□□ 0.3
LAMB1-212ENST00000479448 NHSQ6T4R5 1651 aa16.92■□□□□ 0.3
LAMB1-212ENST00000479448 SBF2Q86WG5 1849 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms