RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 USP47Q96K76 1375 aa19.94■□□□□ 0.78
C9orf85-205ENST00000479413 MAP3K5Q99683 1374 aa19.94■□□□□ 0.78
C9orf85-205ENST00000479413 SLC16A10Q8TF71 515 aa19.93■□□□□ 0.78
C9orf85-205ENST00000479413 CGNL1Q0VF96 1302 aa19.93■□□□□ 0.78
C9orf85-205ENST00000479413 SHANK3Q9BYB0 1731 aa19.93■□□□□ 0.78
C9orf85-205ENST00000479413 POLD1P28340 1107 aa19.92■□□□□ 0.78
C9orf85-205ENST00000479413 RRS1Q15050 365 aaKnown RBP19.92■□□□□ 0.78
C9orf85-205ENST00000479413 CDCA8Q53HL2 280 aa19.92■□□□□ 0.78
C9orf85-205ENST00000479413 GGNBP2Q9H3C7 697 aa19.92■□□□□ 0.78
C9orf85-205ENST00000479413 TFCP2L1Q9NZI6 479 aa19.92■□□□□ 0.78
C9orf85-205ENST00000479413 FYB1O15117 783 aa19.91■□□□□ 0.78
C9orf85-205ENST00000479413 RAPGEF4Q8WZA2 1011 aa19.91■□□□□ 0.78
C9orf85-205ENST00000479413 LY75O60449 1722 aa19.9■□□□□ 0.78
C9orf85-205ENST00000479413 KIF20BQ96Q89 1820 aa19.9■□□□□ 0.78
C9orf85-205ENST00000479413 NSD2O96028 1365 aa19.89■□□□□ 0.77
C9orf85-205ENST00000479413 NBPF6Q5VWK0 638 aa19.89■□□□□ 0.77
C9orf85-205ENST00000479413 PNPLA7Q6ZV29 1317 aa19.89■□□□□ 0.77
C9orf85-205ENST00000479413 NBPF4Q96M43 638 aa19.89■□□□□ 0.77
C9orf85-205ENST00000479413 KCNQ4P56696 695 aa19.88■□□□□ 0.77
C9orf85-205ENST00000479413 KLHL34Q8N239 644 aa19.88■□□□□ 0.77
C9orf85-205ENST00000479413 CCNL1Q9UK58 526 aaPredicted RBP19.88■□□□□ 0.77
C9orf85-205ENST00000479413 UTRNP46939 3433 aa19.88■□□□□ 0.77
C9orf85-205ENST00000479413 CHD4Q14839 1912 aa19.88■□□□□ 0.77
C9orf85-205ENST00000479413 KIF24Q5T7B8 1368 aa19.87■□□□□ 0.77
C9orf85-205ENST00000479413 USHBP1Q8N6Y0 703 aa19.87■□□□□ 0.77
C9orf85-205ENST00000479413 ZNF784Q8NCA9 323 aaPredicted RBP19.87■□□□□ 0.77
C9orf85-205ENST00000479413 TUBGCP6Q96RT7 1819 aa19.87■□□□□ 0.77
C9orf85-205ENST00000479413 INSRP06213 1382 aa19.86■□□□□ 0.77
C9orf85-205ENST00000479413 FLT4P35916 1363 aa19.86■□□□□ 0.77
C9orf85-205ENST00000479413 TATP17735 454 aaPredicted RBP19.86■□□□□ 0.77
C9orf85-205ENST00000479413 COL24A1Q17RW2 1714 aa19.85■□□□□ 0.77
C9orf85-205ENST00000479413 PCDH11XQ9BZA7 1347 aa19.85■□□□□ 0.77
C9orf85-205ENST00000479413 PCDH11YQ9BZA8 1340 aa19.85■□□□□ 0.77
C9orf85-205ENST00000479413 GPR162Q16538 588 aa19.85■□□□□ 0.77
C9orf85-205ENST00000479413 HMGB2P26583 209 aaKnown RBP19.84■□□□□ 0.77
C9orf85-205ENST00000479413 TRIM26Q12899 539 aaPredicted RBP19.84■□□□□ 0.77
C9orf85-205ENST00000479413 HSP90AB2PQ58FF8 381 aa19.84■□□□□ 0.77
C9orf85-205ENST00000479413 MSH5O43196 834 aa19.83■□□□□ 0.77
C9orf85-205ENST00000479413 NSD3Q9BZ95 1437 aa19.8■□□□□ 0.76
C9orf85-205ENST00000479413 PELP1Q8IZL8 1130 aaKnown RBP19.8■□□□□ 0.76
C9orf85-205ENST00000479413 C5P01031 1676 aa19.8■□□□□ 0.76
C9orf85-205ENST00000479413 MPRIPQ6WCQ1 1025 aa19.78■□□□□ 0.76
C9orf85-205ENST00000479413 PALLDQ8WX93 1383 aa19.78■□□□□ 0.76
C9orf85-205ENST00000479413 COL23A1Q86Y22 540 aaPredicted RBP19.77■□□□□ 0.76
C9orf85-205ENST00000479413 CARD14Q9BXL6 1004 aa19.77■□□□□ 0.76
C9orf85-205ENST00000479413 EMILIN1Q9Y6C2 1016 aa19.77■□□□□ 0.76
C9orf85-205ENST00000479413 PPM1GO15355 546 aaPredicted RBP19.76■□□□□ 0.75
C9orf85-205ENST00000479413 PKD1L3Q7Z443 1732 aa19.76■□□□□ 0.75
C9orf85-205ENST00000479413 CYP27B1O15528 508 aa19.75■□□□□ 0.75
C9orf85-205ENST00000479413 FLAD1Q8NFF5 587 aa19.75■□□□□ 0.75
C9orf85-205ENST00000479413 NLGN2Q8NFZ4 835 aa19.75■□□□□ 0.75
C9orf85-205ENST00000479413 SMARCC1Q92922 1105 aaPredicted RBP19.75■□□□□ 0.75
C9orf85-205ENST00000479413 TIMELESSQ9UNS1 1208 aa19.75■□□□□ 0.75
C9orf85-205ENST00000479413 ANKRD26Q9UPS8 1709 aa19.74■□□□□ 0.75
C9orf85-205ENST00000479413 SPG7Q9UQ90 795 aa19.74■□□□□ 0.75
C9orf85-205ENST00000479413 TOGARAM1Q9Y4F4 1720 aa19.73■□□□□ 0.75
C9orf85-205ENST00000479413 MSL1Q68DK7 614 aa19.73■□□□□ 0.75
C9orf85-205ENST00000479413 ITGB4P16144 1822 aa19.73■□□□□ 0.75
C9orf85-205ENST00000479413 TAF1LQ8IZX4 1826 aa19.73■□□□□ 0.75
C9orf85-205ENST00000479413 GRIN3BO60391 1043 aa19.72■□□□□ 0.75
C9orf85-205ENST00000479413 NCAPD2Q15021 1401 aa19.72■□□□□ 0.75
C9orf85-205ENST00000479413 AK7Q96M32 723 aa19.72■□□□□ 0.75
C9orf85-205ENST00000479413 WASHC2AQ641Q2 1341 aa19.71■□□□□ 0.75
C9orf85-205ENST00000479413 C4BP0C0L5 1744 aa19.71■□□□□ 0.75
C9orf85-205ENST00000479413 GOLGB1Q14789 3259 aaKnown RBP19.7■□□□□ 0.74
C9orf85-205ENST00000479413 C1QTNF8P60827 252 aa19.69■□□□□ 0.74
C9orf85-205ENST00000479413 NKX1-1Q15270 411 aaPredicted RBP19.69■□□□□ 0.74
C9orf85-205ENST00000479413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.69■□□□□ 0.741e-6■■■■□ 20.6
C9orf85-205ENST00000479413 CD2APQ9Y5K6 639 aa19.69■□□□□ 0.74
C9orf85-205ENST00000479413 MAP2P11137 1827 aaKnown RBP19.69■□□□□ 0.74
C9orf85-205ENST00000479413 PIGBQ92521 554 aa19.68■□□□□ 0.74
C9orf85-205ENST00000479413 POLR3GLQ9BT43 218 aa19.68■□□□□ 0.74
C9orf85-205ENST00000479413 SENP3-EIF4A1A0A087X0R7 540 aa19.67■□□□□ 0.74
C9orf85-205ENST00000479413 YBX3P16989 372 aaKnown RBP eCLIP19.67■□□□□ 0.74
C9orf85-205ENST00000479413 EYA1Q99502 592 aa19.67■□□□□ 0.74
C9orf85-205ENST00000479413 TMOD3Q9NYL9 352 aa19.67■□□□□ 0.74
C9orf85-205ENST00000479413 CLSPNQ9HAW4 1339 aa19.67■□□□□ 0.74
C9orf85-205ENST00000479413 GIGYF1O75420 1035 aaPredicted RBP19.66■□□□□ 0.74
C9orf85-205ENST00000479413 UBR3Q6ZT12 1888 aa19.65■□□□□ 0.74
C9orf85-205ENST00000479413 LOC102724428A0A0B4J2F2 783 aa19.65■□□□□ 0.74
C9orf85-205ENST00000479413 PHF14O94880 888 aa19.65■□□□□ 0.74
C9orf85-205ENST00000479413 SIK1P57059 783 aa19.65■□□□□ 0.74
C9orf85-205ENST00000479413 IFNL2Q8IZJ0 200 aa19.65■□□□□ 0.74
C9orf85-205ENST00000479413 POLKQ9UBT6 870 aa19.65■□□□□ 0.74
C9orf85-205ENST00000479413 PLEKHG2Q9H7P9 1386 aa19.63■□□□□ 0.73
C9orf85-205ENST00000479413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.63■□□□□ 0.73
C9orf85-205ENST00000479413 SSFA2P28290 1259 aa19.63■□□□□ 0.73
C9orf85-205ENST00000479413 TNNT2P45379 298 aaPredicted RBP19.63■□□□□ 0.73
C9orf85-205ENST00000479413 PHKG2P15735 406 aa19.62■□□□□ 0.73
C9orf85-205ENST00000479413 EIF4A2Q14240 407 aaKnown RBP19.61■□□□□ 0.73
C9orf85-205ENST00000479413 LINC00116Q8NCU8 138 aa19.61■□□□□ 0.73
C9orf85-205ENST00000479413 PCGF6Q9BYE7 350 aa19.61■□□□□ 0.73
C9orf85-205ENST00000479413 ASAP1Q9ULH1 1129 aa19.61■□□□□ 0.73
C9orf85-205ENST00000479413 ATP6V1AP38606 617 aa19.6■□□□□ 0.73
C9orf85-205ENST00000479413 AMIGO3Q86WK7 504 aa19.6■□□□□ 0.73
C9orf85-205ENST00000479413 GNPATO15228 680 aa19.59■□□□□ 0.73
C9orf85-205ENST00000479413 EIF4G2P78344 907 aaKnown RBP eCLIP19.58■□□□□ 0.72
C9orf85-205ENST00000479413 HSP90AB1P08238 724 aaKnown RBP19.57■□□□□ 0.72
C9orf85-205ENST00000479413 ITPK1Q13572 414 aa19.57■□□□□ 0.72
C9orf85-205ENST00000479413 SMIM5Q71RC9 77 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms