RNA–Protein interactions for RNA: ENST00000479153.1

SUMO3-206, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 1,736 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-206ENST00000479153 BARGINQ6ZT62 677 aa17.44■□□□□ 0.38
SUMO3-206ENST00000479153 FCHSD2O94868 740 aa17.44■□□□□ 0.38
SUMO3-206ENST00000479153 THSD7AQ9UPZ6 1657 aa17.43■□□□□ 0.38
SUMO3-206ENST00000479153 SENP3-EIF4A1A0A087X0R7 540 aa17.43■□□□□ 0.38
SUMO3-206ENST00000479153 BRWD3Q6RI45 1802 aa17.43■□□□□ 0.38
SUMO3-206ENST00000479153 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
SUMO3-206ENST00000479153 SHANK3Q9BYB0 1731 aa17.42■□□□□ 0.38
SUMO3-206ENST00000479153 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
SUMO3-206ENST00000479153 OVOS2A0A0G2JMS6 1433 aa17.42■□□□□ 0.38
SUMO3-206ENST00000479153 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
SUMO3-206ENST00000479153 PKD1L3Q7Z443 1732 aa17.41■□□□□ 0.38
SUMO3-206ENST00000479153 PLEKHF1Q96S99 279 aa17.41■□□□□ 0.38
SUMO3-206ENST00000479153 KAT6BQ8WYB5 2073 aa17.4■□□□□ 0.38
SUMO3-206ENST00000479153 DDB1Q16531 1140 aa17.4■□□□□ 0.38
SUMO3-206ENST00000479153 CDCA7Q9BWT1 371 aaPredicted RBP17.4■□□□□ 0.38
SUMO3-206ENST00000479153 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
SUMO3-206ENST00000479153 EXOC5O00471 708 aa17.39■□□□□ 0.37
SUMO3-206ENST00000479153 ONECUT3O60422 494 aaPredicted RBP17.39■□□□□ 0.37
SUMO3-206ENST00000479153 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.37
SUMO3-206ENST00000479153 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.37
SUMO3-206ENST00000479153 MTHFSDQ2M296 383 aaKnown RBP17.38■□□□□ 0.37
SUMO3-206ENST00000479153 PLEKHO1Q53GL0 409 aaPredicted RBP17.38■□□□□ 0.37
SUMO3-206ENST00000479153 DDX54Q8TDD1 881 aaKnown RBP17.38■□□□□ 0.37
SUMO3-206ENST00000479153 PNNQ9H307 717 aaKnown RBP17.38■□□□□ 0.37
SUMO3-206ENST00000479153 RGS12O14924 1447 aa17.38■□□□□ 0.37
SUMO3-206ENST00000479153 NEFMP07197 916 aa17.38■□□□□ 0.37
SUMO3-206ENST00000479153 RUNDC1Q96C34 613 aa17.38■□□□□ 0.37
SUMO3-206ENST00000479153 VIRMAQ69YN4 1812 aaKnown RBP17.38■□□□□ 0.37
SUMO3-206ENST00000479153 TNS2Q63HR2 1409 aa17.37■□□□□ 0.37
SUMO3-206ENST00000479153 SPG7Q9UQ90 795 aa17.37■□□□□ 0.37
SUMO3-206ENST00000479153 ZNF530Q6P9A1 599 aaPredicted RBP17.36■□□□□ 0.37
SUMO3-206ENST00000479153 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
SUMO3-206ENST00000479153 NEUROD2Q15784 382 aa17.35■□□□□ 0.37
SUMO3-206ENST00000479153 AMOTQ4VCS5 1084 aa17.35■□□□□ 0.37
SUMO3-206ENST00000479153 FAM182BQ5T319 152 aa17.35■□□□□ 0.37
SUMO3-206ENST00000479153 RRP7AQ9Y3A4 280 aaKnown RBP17.35■□□□□ 0.37
SUMO3-206ENST00000479153 APAF1O14727 1248 aa17.35■□□□□ 0.37
SUMO3-206ENST00000479153 CYP27B1O15528 508 aa17.35■□□□□ 0.37
SUMO3-206ENST00000479153 EP400Q96L91 3159 aa17.34■□□□□ 0.37
SUMO3-206ENST00000479153 PCDH11XQ9BZA7 1347 aa17.34■□□□□ 0.37
SUMO3-206ENST00000479153 PCDH11YQ9BZA8 1340 aa17.34■□□□□ 0.37
SUMO3-206ENST00000479153 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.34■□□□□ 0.37
SUMO3-206ENST00000479153 MARCH10Q8NA82 808 aaPredicted RBP17.33■□□□□ 0.37
SUMO3-206ENST00000479153 GAS2L2Q8NHY3 880 aa17.33■□□□□ 0.37
SUMO3-206ENST00000479153 C1orf141Q5JVX7 400 aa17.33■□□□□ 0.36
SUMO3-206ENST00000479153 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.36
SUMO3-206ENST00000479153 PHKG2P15735 406 aa17.32■□□□□ 0.36
SUMO3-206ENST00000479153 TMPOP42166 694 aaKnown RBP17.32■□□□□ 0.36
SUMO3-206ENST00000479153 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
SUMO3-206ENST00000479153 KRT27Q7Z3Y8 459 aa17.32■□□□□ 0.36
SUMO3-206ENST00000479153 IFNL2Q8IZJ0 200 aa17.32■□□□□ 0.36
SUMO3-206ENST00000479153 PLEKHG2Q9H7P9 1386 aa17.31■□□□□ 0.36
SUMO3-206ENST00000479153 RIPK4P57078 832 aa17.3■□□□□ 0.36
SUMO3-206ENST00000479153 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
SUMO3-206ENST00000479153 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
SUMO3-206ENST00000479153 SCN11AQ9UI33 1791 aa17.29■□□□□ 0.36
SUMO3-206ENST00000479153 GNAT3A8MTJ3 354 aa17.29■□□□□ 0.36
SUMO3-206ENST00000479153 DCTN1Q14203 1278 aa17.29■□□□□ 0.36
SUMO3-206ENST00000479153 DOT1LQ8TEK3 1739 aa17.29■□□□□ 0.36
SUMO3-206ENST00000479153 TOGARAM1Q9Y4F4 1720 aa17.29■□□□□ 0.36
SUMO3-206ENST00000479153 MAP3K5Q99683 1374 aa17.29■□□□□ 0.36
SUMO3-206ENST00000479153 MCM10Q7L590 875 aa17.27■□□□□ 0.36
SUMO3-206ENST00000479153 LGR6Q9HBX8 967 aa17.27■□□□□ 0.36
SUMO3-206ENST00000479153 ITGB4P16144 1822 aa17.27■□□□□ 0.36
SUMO3-206ENST00000479153 SBF2Q86WG5 1849 aa17.27■□□□□ 0.36
SUMO3-206ENST00000479153 KDM6AO15550 1401 aaPredicted RBP17.27■□□□□ 0.35
SUMO3-206ENST00000479153 ACSBG1Q96GR2 724 aa17.27■□□□□ 0.35
SUMO3-206ENST00000479153 RTF1Q92541 710 aaKnown RBP17.26■□□□□ 0.35
SUMO3-206ENST00000479153 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
SUMO3-206ENST00000479153 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
SUMO3-206ENST00000479153 NKX1-1Q15270 411 aaPredicted RBP17.25■□□□□ 0.35
SUMO3-206ENST00000479153 IL17REQ8NFR9 667 aa17.25■□□□□ 0.35
SUMO3-206ENST00000479153 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
SUMO3-206ENST00000479153 RNMTO43148 476 aaKnown RBP17.24■□□□□ 0.35
SUMO3-206ENST00000479153 HNRNPUQ00839 825 aaKnown RBP eCLIP17.24■□□□□ 0.35
SUMO3-206ENST00000479153 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
SUMO3-206ENST00000479153 SYTL4Q96C24 671 aaPredicted RBP17.24■□□□□ 0.35
SUMO3-206ENST00000479153 ADAMTS7Q9UKP4 1686 aa17.23■□□□□ 0.35
SUMO3-206ENST00000479153 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
SUMO3-206ENST00000479153 KCNQ2O43526 872 aa17.22■□□□□ 0.35
SUMO3-206ENST00000479153 PRIM1P49642 420 aaKnown RBP17.21■□□□□ 0.35
SUMO3-206ENST00000479153 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
SUMO3-206ENST00000479153 FAM196AQ6ZSG2 479 aa17.21■□□□□ 0.35
SUMO3-206ENST00000479153 SIPA1L3O60292 1781 aaPredicted RBP17.21■□□□□ 0.35
SUMO3-206ENST00000479153 HTATSF1O43719 755 aaKnown RBP17.21■□□□□ 0.35
SUMO3-206ENST00000479153 PTF1AQ7RTS3 328 aa17.21■□□□□ 0.35
SUMO3-206ENST00000479153 CABP4P57796 275 aa17.2■□□□□ 0.34
SUMO3-206ENST00000479153 ILDR2Q71H61 639 aa17.2■□□□□ 0.34
SUMO3-206ENST00000479153 WWC1Q8IX03 1113 aa17.2■□□□□ 0.34
SUMO3-206ENST00000479153 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
SUMO3-206ENST00000479153 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
SUMO3-206ENST00000479153 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
SUMO3-206ENST00000479153 TEFQ10587 303 aa17.19■□□□□ 0.34
SUMO3-206ENST00000479153 BTAF1O14981 1849 aa17.19■□□□□ 0.34
SUMO3-206ENST00000479153 ERVV-2B6SEH9 535 aa17.18■□□□□ 0.34
SUMO3-206ENST00000479153 TRIM37O94972 964 aa17.18■□□□□ 0.34
SUMO3-206ENST00000479153 BCL9O00512 1426 aa17.18■□□□□ 0.34
SUMO3-206ENST00000479153 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
SUMO3-206ENST00000479153 SLC52A2Q9HAB3 445 aa17.18■□□□□ 0.34
SUMO3-206ENST00000479153 TMOD3Q9NYL9 352 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms