RNA–Protein interactions for RNA: ENST00000478888.1

GKN1-202, Transcript of gastrokine 1, humanhuman

TSL 2

Gene GKN1, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1-202ENST00000478888 TRIM52Q96A61 297 aa5.86□□□□□ -1.47
GKN1-202ENST00000478888 NUTM2BA6NNL0 878 aaPredicted RBP5.85□□□□□ -1.47
GKN1-202ENST00000478888 NUTM2EB1AL46 878 aaPredicted RBP5.85□□□□□ -1.47
GKN1-202ENST00000478888 SHISA8B8ZZ34 492 aa5.85□□□□□ -1.47
GKN1-202ENST00000478888 C6orf229H3BNL8 230 aa5.85□□□□□ -1.47
GKN1-202ENST00000478888 PIK3R2O00459 728 aa5.85□□□□□ -1.47
GKN1-202ENST00000478888 FLIIQ13045 1269 aa5.85□□□□□ -1.47
GKN1-202ENST00000478888 LCE5AQ5TCM9 118 aa5.85□□□□□ -1.47
GKN1-202ENST00000478888 NUTM2DQ5VT03 806 aaPredicted RBP5.85□□□□□ -1.47
GKN1-202ENST00000478888 LINC00114Q6XXX2 140 aa5.85□□□□□ -1.47
GKN1-202ENST00000478888 NUTM2AQ8IVF1 878 aaPredicted RBP5.85□□□□□ -1.47
GKN1-202ENST00000478888 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.85□□□□□ -1.47
GKN1-202ENST00000478888 ATP1B4Q9UN42 357 aaPredicted RBP5.85□□□□□ -1.47
GKN1-202ENST00000478888 MOXD2PA6NHM9 499 aa5.84□□□□□ -1.47
GKN1-202ENST00000478888 LILRB3O75022 631 aa5.84□□□□□ -1.47
GKN1-202ENST00000478888 PTPRNQ16849 979 aa5.84□□□□□ -1.47
GKN1-202ENST00000478888 ARMC2Q8NEN0 867 aa5.84□□□□□ -1.47
GKN1-202ENST00000478888 IL27Q8NEV9 243 aa5.84□□□□□ -1.47
GKN1-202ENST00000478888 FAM174AQ8TBP5 190 aa5.84□□□□□ -1.47
GKN1-202ENST00000478888 BAP1Q92560 729 aa5.84□□□□□ -1.47
GKN1-202ENST00000478888 CUEDC1Q9NWM3 386 aaPredicted RBP5.84□□□□□ -1.47
GKN1-202ENST00000478888 ARID5BQ14865 1188 aa5.83□□□□□ -1.48
GKN1-202ENST00000478888 ZNF511Q8NB15 262 aa5.83□□□□□ -1.48
GKN1-202ENST00000478888 GPKOWQ92917 476 aaPredicted RBP eCLIP5.83□□□□□ -1.48
GKN1-202ENST00000478888 RNF114Q9Y508 228 aa5.83□□□□□ -1.48
GKN1-202ENST00000478888 ZC3H4Q9UPT8 1303 aaKnown RBP5.82□□□□□ -1.48
GKN1-202ENST00000478888 GPR25O00155 361 aa5.82□□□□□ -1.48
GKN1-202ENST00000478888 GNB5O14775 395 aa5.82□□□□□ -1.48
GKN1-202ENST00000478888 SPINT1O43278 529 aa5.82□□□□□ -1.48
GKN1-202ENST00000478888 TPSG1Q9NRR2 321 aa5.82□□□□□ -1.48
GKN1-202ENST00000478888 FOXR1Q6PIV2 292 aa5.81□□□□□ -1.48
GKN1-202ENST00000478888 WWC1Q8IX03 1113 aa5.81□□□□□ -1.48
GKN1-202ENST00000478888 UNC93B1Q9H1C4 597 aa5.81□□□□□ -1.48
GKN1-202ENST00000478888 HRCP23327 699 aa5.8□□□□□ -1.48
GKN1-202ENST00000478888 NOP53Q9NZM5 478 aaKnown RBP5.8□□□□□ -1.48
GKN1-202ENST00000478888 PRR7Q8TB68 274 aa5.79□□□□□ -1.48
GKN1-202ENST00000478888 ZNF837Q96EG3 531 aaPredicted RBP5.79□□□□□ -1.48
GKN1-202ENST00000478888 GMCL1Q96IK5 515 aa5.79□□□□□ -1.48
GKN1-202ENST00000478888 OXCT2Q9BYC2 517 aaPredicted RBP5.79□□□□□ -1.48
GKN1-202ENST00000478888 POLR3EQ9NVU0 708 aa5.79□□□□□ -1.48
GKN1-202ENST00000478888 NSFL1CQ9UNZ2 370 aaKnown RBP5.79□□□□□ -1.48
GKN1-202ENST00000478888 CCNYL3P0C7X3 344 aa5.78□□□□□ -1.48
GKN1-202ENST00000478888 HOXB4P17483 251 aaPredicted RBP5.78□□□□□ -1.48
GKN1-202ENST00000478888 GRM5P41594 1212 aa5.78□□□□□ -1.48
GKN1-202ENST00000478888 NBPF14Q5TI25 921 aa5.78□□□□□ -1.48
GKN1-202ENST00000478888 LYPD8Q6UX82 237 aa5.78□□□□□ -1.48
GKN1-202ENST00000478888 CCDC125Q86Z20 511 aa5.78□□□□□ -1.48
GKN1-202ENST00000478888 LIMD1Q9UGP4 676 aa5.78□□□□□ -1.48
GKN1-202ENST00000478888 NDUFV2P19404 249 aa5.77□□□□□ -1.49
GKN1-202ENST00000478888 MX2P20592 715 aa5.77□□□□□ -1.49
GKN1-202ENST00000478888 RFC5P40937 340 aa5.77□□□□□ -1.49
GKN1-202ENST00000478888 MCCD1P59942 119 aaPredicted RBP5.77□□□□□ -1.49
GKN1-202ENST00000478888 PCDHGC3Q9UN70 934 aa5.77□□□□□ -1.49
GKN1-202ENST00000478888 GPSM3Q9Y4H4 160 aa5.77□□□□□ -1.49
GKN1-202ENST00000478888 EVA1BQ9NVM1 165 aa5.76□□□□□ -1.49
GKN1-202ENST00000478888 ZNF330Q9Y3S2 320 aaPredicted RBP5.76□□□□□ -1.49
GKN1-202ENST00000478888 ELNP15502 786 aa5.75□□□□□ -1.49
GKN1-202ENST00000478888 C1orf229Q6ZS94 237 aaPredicted RBP5.75□□□□□ -1.49
GKN1-202ENST00000478888 CTSOP43234 321 aaPredicted RBP5.74□□□□□ -1.49
GKN1-202ENST00000478888 IRAK1P51617 712 aa5.74□□□□□ -1.49
GKN1-202ENST00000478888 QPCTQ16769 361 aa5.74□□□□□ -1.49
GKN1-202ENST00000478888 EDARADDQ8WWZ3 215 aa5.74□□□□□ -1.49
GKN1-202ENST00000478888 CDV3Q9UKY7 258 aaKnown RBP5.74□□□□□ -1.49
GKN1-202ENST00000478888 PCDHB15Q9Y5E8 787 aa5.74□□□□□ -1.49
GKN1-202ENST00000478888 RAD21O60216 631 aa5.73□□□□□ -1.49
GKN1-202ENST00000478888 AP1G2O75843 785 aa5.73□□□□□ -1.49
GKN1-202ENST00000478888 MAP2K3P46734 347 aa5.73□□□□□ -1.49
GKN1-202ENST00000478888 KCNH2Q12809 1159 aa5.73□□□□□ -1.49
GKN1-202ENST00000478888 CSPP1Q1MSJ5 1256 aa5.73□□□□□ -1.49
GKN1-202ENST00000478888 TRIM22Q8IYM9 498 aa5.73□□□□□ -1.49
GKN1-202ENST00000478888 CFAP99D6REC4 459 aa5.72□□□□□ -1.49
GKN1-202ENST00000478888 USP17L8P0C7I0 530 aa5.72□□□□□ -1.49
GKN1-202ENST00000478888 TAL1P17542 331 aaPredicted RBP5.72□□□□□ -1.49
GKN1-202ENST00000478888 GUCA2AQ02747 115 aa5.72□□□□□ -1.49
GKN1-202ENST00000478888 PROCA1Q8NCQ7 364 aaPredicted RBP5.72□□□□□ -1.49
GKN1-202ENST00000478888 EMILIN1Q9Y6C2 1016 aa5.72□□□□□ -1.49
GKN1-202ENST00000478888 NDUFB9Q9Y6M9 179 aa5.72□□□□□ -1.49
GKN1-202ENST00000478888 AMPD1P23109 780 aa5.71□□□□□ -1.5
GKN1-202ENST00000478888 SOX11P35716 441 aa5.71□□□□□ -1.5
GKN1-202ENST00000478888 WASHC4Q2M389 1173 aa5.71□□□□□ -1.5
GKN1-202ENST00000478888 RNF217Q8TC41 542 aa5.71□□□□□ -1.5
GKN1-202ENST00000478888 CABLES1Q8TDN4 633 aa5.71□□□□□ -1.5
GKN1-202ENST00000478888 TSC1Q92574 1164 aa5.71□□□□□ -1.5
GKN1-202ENST00000478888 TRERF1Q96PN7 1200 aa5.71□□□□□ -1.5
GKN1-202ENST00000478888 F12P00748 615 aaPredicted RBP5.7□□□□□ -1.5
GKN1-202ENST00000478888 RTL5Q5HYW3 569 aaPredicted RBP5.7□□□□□ -1.5
GKN1-202ENST00000478888 PDXDC2PQ6P474 469 aa5.7□□□□□ -1.5
GKN1-202ENST00000478888 Q6ZVU0 165 aa5.7□□□□□ -1.5
GKN1-202ENST00000478888 BPHLQ86WA6 291 aaPredicted RBP5.7□□□□□ -1.5
GKN1-202ENST00000478888 CTHP32929 405 aa5.69□□□□□ -1.5
GKN1-202ENST00000478888 PTK2Q05397 1052 aa5.69□□□□□ -1.5
GKN1-202ENST00000478888 HLA-CQ95604 372 aa5.69□□□□□ -1.5
GKN1-202ENST00000478888 FKBPLQ9UIM3 349 aa5.69□□□□□ -1.5
GKN1-202ENST00000478888 GDF2Q9UK05 429 aaPredicted RBP5.69□□□□□ -1.5
GKN1-202ENST00000478888 MCM6Q14566 821 aa5.68□□□□□ -1.5
GKN1-202ENST00000478888 DBN1Q16643 649 aa5.68□□□□□ -1.5
GKN1-202ENST00000478888 FSHRP23945 695 aa5.67□□□□□ -1.5
GKN1-202ENST00000478888 CBLBQ13191 982 aa5.67□□□□□ -1.5
GKN1-202ENST00000478888 SYMPKQ92797 1274 aaKnown RBP5.67□□□□□ -1.5
GKN1-202ENST00000478888 GTPBP3Q969Y2 492 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms