RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 WASHC4Q2M389 1173 aa3.74□□□□□ -1.81
PDE1C-208ENST00000478736 OXLD1Q5BKU9 147 aa3.74□□□□□ -1.81
PDE1C-208ENST00000478736 RNF135Q8IUD6 432 aa3.74□□□□□ -1.81
PDE1C-208ENST00000478736 LINC00528Q8N1L1 170 aa3.74□□□□□ -1.81
PDE1C-208ENST00000478736 GLMNQ92990 594 aa3.74□□□□□ -1.81
PDE1C-208ENST00000478736 ZMYND15Q9H091 742 aa3.74□□□□□ -1.81
PDE1C-208ENST00000478736 C1orf115Q9H7X2 142 aa3.74□□□□□ -1.81
PDE1C-208ENST00000478736 CHIC2Q9UKJ5 165 aa3.74□□□□□ -1.81
PDE1C-208ENST00000478736 APBB1O00213 710 aa3.73□□□□□ -1.81
PDE1C-208ENST00000478736 LGR5O75473 907 aa3.73□□□□□ -1.81
PDE1C-208ENST00000478736 SKIP12755 728 aa3.73□□□□□ -1.81
PDE1C-208ENST00000478736 ERVK-9P63128 1117 aa3.73□□□□□ -1.81
PDE1C-208ENST00000478736 PLPP7Q8NBV4 271 aa3.73□□□□□ -1.81
PDE1C-208ENST00000478736 GAS2L2Q8NHY3 880 aa3.73□□□□□ -1.81
PDE1C-208ENST00000478736 TRIM47Q96LD4 638 aa3.73□□□□□ -1.81
PDE1C-208ENST00000478736 PRM3Q9NNZ6 103 aa3.73□□□□□ -1.81
PDE1C-208ENST00000478736 DNMT3LQ9UJW3 386 aa3.73□□□□□ -1.81
PDE1C-208ENST00000478736 CDV3Q9UKY7 258 aaKnown RBP3.73□□□□□ -1.81
PDE1C-208ENST00000478736 SOS2Q07890 1332 aaPredicted RBP3.72□□□□□ -1.81
PDE1C-208ENST00000478736 A0A1W2PRU2 124 aa3.72□□□□□ -1.81
PDE1C-208ENST00000478736 ADH1AP07327 375 aa3.72□□□□□ -1.81
PDE1C-208ENST00000478736 PTGIRP43119 386 aa3.72□□□□□ -1.81
PDE1C-208ENST00000478736 SLFNL1Q499Z3 407 aa3.72□□□□□ -1.81
PDE1C-208ENST00000478736 CDCA8Q53HL2 280 aa3.72□□□□□ -1.81
PDE1C-208ENST00000478736 FOXD4L5Q5VV16 416 aaPredicted RBP3.72□□□□□ -1.81
PDE1C-208ENST00000478736 CC2D2BQ6DHV5 1058 aa3.72□□□□□ -1.81
PDE1C-208ENST00000478736 ARHGEF10LQ9HCE6 1279 aa3.72□□□□□ -1.81
PDE1C-208ENST00000478736 PGPEP1Q9NXJ5 209 aa3.72□□□□□ -1.81
PDE1C-208ENST00000478736 TFIP11Q9UBB9 837 aaKnown RBP3.72□□□□□ -1.81
PDE1C-208ENST00000478736 DOLKQ9UPQ8 538 aa3.72□□□□□ -1.81
PDE1C-208ENST00000478736 KIAA1024Q9UPX6 916 aa3.72□□□□□ -1.81
PDE1C-208ENST00000478736 ZBTB7BO15156 539 aaPredicted RBP3.71□□□□□ -1.82
PDE1C-208ENST00000478736 SPINT1O43278 529 aa3.71□□□□□ -1.82
PDE1C-208ENST00000478736 IL2RAP01589 272 aa3.71□□□□□ -1.82
PDE1C-208ENST00000478736 RHOQP17081 205 aa3.71□□□□□ -1.82
PDE1C-208ENST00000478736 SCNN1DP51172 638 aa3.71□□□□□ -1.82
PDE1C-208ENST00000478736 DHX9Q08211 1270 aaKnown RBP3.71□□□□□ -1.82
PDE1C-208ENST00000478736 NCOA4Q13772 614 aa3.71□□□□□ -1.82
PDE1C-208ENST00000478736 SEPT12Q8IYM1 358 aa3.71□□□□□ -1.82
PDE1C-208ENST00000478736 PCDHGA11Q9Y5H2 935 aa3.71□□□□□ -1.82
PDE1C-208ENST00000478736 USP3Q9Y6I4 520 aa3.71□□□□□ -1.82
PDE1C-208ENST00000478736 PALM3A6NDB9 673 aaPredicted RBP3.7□□□□□ -1.82
PDE1C-208ENST00000478736 TTLL8A6PVC2 850 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 USP17L5A8MUK1 530 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 ATP5J2-PTCD1G3V325 749 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 MEN1O00255 615 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 SUPT5HO00267 1087 aaKnown RBP3.7□□□□□ -1.82
PDE1C-208ENST00000478736 RFX1P22670 979 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 CLDN10P78369 228 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 SCARF1Q14162 830 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 PRICKLE2Q7Z3G6 844 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 C14orf37Q86TY3 774 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 KCTD17Q8N5Z5 321 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 CALR3Q96L12 384 aaKnown RBP3.7□□□□□ -1.82
PDE1C-208ENST00000478736 PSMG3-AS1Q96PY0 264 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 TSEN34Q9BSV6 310 aaKnown RBP3.7□□□□□ -1.82
PDE1C-208ENST00000478736 ETNK1Q9HBU6 452 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 POLMQ9NP87 494 aaPredicted RBP3.7□□□□□ -1.82
PDE1C-208ENST00000478736 HRH3Q9Y5N1 445 aa3.7□□□□□ -1.82
PDE1C-208ENST00000478736 SENP3-EIF4A1A0A087X0R7 540 aa3.69□□□□□ -1.82
PDE1C-208ENST00000478736 TMEM229AB2RXF0 380 aa3.69□□□□□ -1.82
PDE1C-208ENST00000478736 DKK1O94907 266 aa3.69□□□□□ -1.82
PDE1C-208ENST00000478736 MCCD1P59942 119 aaPredicted RBP3.69□□□□□ -1.82
PDE1C-208ENST00000478736 POU4F2Q12837 409 aa3.69□□□□□ -1.82
PDE1C-208ENST00000478736 CFAP70Q5T0N1 1121 aa3.69□□□□□ -1.82
PDE1C-208ENST00000478736 RNF20Q5VTR2 975 aa3.69□□□□□ -1.82
PDE1C-208ENST00000478736 RNF217Q8TC41 542 aa3.69□□□□□ -1.82
PDE1C-208ENST00000478736 KLRG1Q96E93 195 aa3.69□□□□□ -1.82
PDE1C-208ENST00000478736 PPP1R12CQ9BZL4 782 aa3.69□□□□□ -1.82
PDE1C-208ENST00000478736 CUEDC1Q9NWM3 386 aaPredicted RBP3.69□□□□□ -1.82
PDE1C-208ENST00000478736 SERTAD1Q9UHV2 236 aa3.69□□□□□ -1.82
PDE1C-208ENST00000478736 ERBB4Q15303 1308 aa3.69□□□□□ -1.82
PDE1C-208ENST00000478736 USP17L3A6NCW0 530 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 USP17L4A6NCW7 530 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 ATP9BO43861 1147 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 MAN1A2O60476 641 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 LMOD1P29536 600 aaPredicted RBP3.68□□□□□ -1.82
PDE1C-208ENST00000478736 PHKA2P46019 1235 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 CENPCQ03188 943 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 PTSQ03393 145 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 USP4Q13107 963 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 TBCELQ5QJ74 424 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 KANK4Q5T7N3 995 aaPredicted RBP3.68□□□□□ -1.82
PDE1C-208ENST00000478736 USP17L2Q6R6M4 530 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 USP17L1Q7RTZ2 530 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 GPR161Q8N6U8 529 aaKnown RBP3.68□□□□□ -1.82
PDE1C-208ENST00000478736 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.68□□□□□ -1.82
PDE1C-208ENST00000478736 CNKSR1Q969H4 720 aa3.68□□□□□ -1.82
PDE1C-208ENST00000478736 MKRN1Q9UHC7 482 aaKnown RBP3.68□□□□□ -1.82
PDE1C-208ENST00000478736 MAFBQ9Y5Q3 323 aaPredicted RBP3.68□□□□□ -1.82
PDE1C-208ENST00000478736 UPP2O95045 317 aa3.67□□□□□ -1.82
PDE1C-208ENST00000478736 SOX11P35716 441 aa3.67□□□□□ -1.82
PDE1C-208ENST00000478736 RNF144AP50876 292 aaPredicted RBP3.67□□□□□ -1.82
PDE1C-208ENST00000478736 GDF10P55107 478 aa3.67□□□□□ -1.82
PDE1C-208ENST00000478736 GTF2IP78347 998 aa3.67□□□□□ -1.82
PDE1C-208ENST00000478736 SRPK2P78362 688 aaKnown RBP3.67□□□□□ -1.82
PDE1C-208ENST00000478736 CLN3Q13286 438 aa3.67□□□□□ -1.82
PDE1C-208ENST00000478736 CRTC2Q53ET0 693 aaPredicted RBP3.67□□□□□ -1.82
PDE1C-208ENST00000478736 XAGE2Q96GT9 111 aa3.67□□□□□ -1.82
PDE1C-208ENST00000478736 FHDC1Q9C0D6 1143 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms