RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 CGNL1Q0VF96 1302 aa26.11■■□□□ 1.77
PRKCD-204ENST00000477794 GPR162Q16538 588 aa26.09■■□□□ 1.77
PRKCD-204ENST00000477794 RAPGEF4Q8WZA2 1011 aa26.08■■□□□ 1.77
PRKCD-204ENST00000477794 TMF1P82094 1093 aa26.07■■□□□ 1.76
PRKCD-204ENST00000477794 CDCA8Q53HL2 280 aa26.07■■□□□ 1.76
PRKCD-204ENST00000477794 KLHL34Q8N239 644 aa26.07■■□□□ 1.76
PRKCD-204ENST00000477794 UTRNP46939 3433 aa26.07■■□□□ 1.76
PRKCD-204ENST00000477794 CCNL1Q9UK58 526 aaPredicted RBP26.05■■□□□ 1.76
PRKCD-204ENST00000477794 USP47Q96K76 1375 aa26.05■■□□□ 1.76
PRKCD-204ENST00000477794 PNPLA7Q6ZV29 1317 aa26.04■■□□□ 1.76
PRKCD-204ENST00000477794 TATP17735 454 aaPredicted RBP26.01■■□□□ 1.75
PRKCD-204ENST00000477794 QSER1Q2KHR3 1735 aa26.01■■□□□ 1.75
PRKCD-204ENST00000477794 MEGF6O75095 1541 aa26■■□□□ 1.75
PRKCD-204ENST00000477794 MSH5O43196 834 aa26■■□□□ 1.75
PRKCD-204ENST00000477794 RRS1Q15050 365 aaKnown RBP26■■□□□ 1.75
PRKCD-204ENST00000477794 CHD4Q14839 1912 aa26■■□□□ 1.75
PRKCD-204ENST00000477794 FYB1O15117 783 aa25.99■■□□□ 1.75
PRKCD-204ENST00000477794 NBPF6Q5VWK0 638 aa25.99■■□□□ 1.75
PRKCD-204ENST00000477794 PELP1Q8IZL8 1130 aaKnown RBP25.99■■□□□ 1.75
PRKCD-204ENST00000477794 NBPF4Q96M43 638 aa25.99■■□□□ 1.75
PRKCD-204ENST00000477794 GGNBP2Q9H3C7 697 aa25.99■■□□□ 1.75
PRKCD-204ENST00000477794 DOT1LQ8TEK3 1739 aa25.99■■□□□ 1.75
PRKCD-204ENST00000477794 KIF24Q5T7B8 1368 aa25.98■■□□□ 1.75
PRKCD-204ENST00000477794 PCDH11XQ9BZA7 1347 aa25.98■■□□□ 1.75
PRKCD-204ENST00000477794 PCDH11YQ9BZA8 1340 aa25.98■■□□□ 1.75
PRKCD-204ENST00000477794 FBLN1P23142 703 aa25.98■■□□□ 1.75
PRKCD-204ENST00000477794 NSD2O96028 1365 aa25.97■■□□□ 1.75
PRKCD-204ENST00000477794 KCNQ4P56696 695 aa25.97■■□□□ 1.75
PRKCD-204ENST00000477794 INSRP06213 1382 aa25.95■■□□□ 1.75
PRKCD-204ENST00000477794 FLT4P35916 1363 aa25.95■■□□□ 1.75
PRKCD-204ENST00000477794 FLAD1Q8NFF5 587 aa25.95■■□□□ 1.74
PRKCD-204ENST00000477794 GRIN3BO60391 1043 aa25.94■■□□□ 1.74
PRKCD-204ENST00000477794 USHBP1Q8N6Y0 703 aa25.94■■□□□ 1.74
PRKCD-204ENST00000477794 LY75O60449 1722 aa25.93■■□□□ 1.74
PRKCD-204ENST00000477794 C1QTNF8P60827 252 aa25.91■■□□□ 1.74
PRKCD-204ENST00000477794 HSP90AB2PQ58FF8 381 aa25.9■■□□□ 1.74
PRKCD-204ENST00000477794 SMARCC1Q92922 1105 aaPredicted RBP25.9■■□□□ 1.74
PRKCD-204ENST00000477794 SENP3-EIF4A1A0A087X0R7 540 aa25.89■■□□□ 1.74
PRKCD-204ENST00000477794 COL23A1Q86Y22 540 aaPredicted RBP25.89■■□□□ 1.74
PRKCD-204ENST00000477794 COL24A1Q17RW2 1714 aa25.88■■□□□ 1.73
PRKCD-204ENST00000477794 SHANK3Q9BYB0 1731 aa25.88■■□□□ 1.73
PRKCD-204ENST00000477794 RGPD2P0DJD1 1756 aa25.88■■□□□ 1.73
PRKCD-204ENST00000477794 PALLDQ8WX93 1383 aa25.88■■□□□ 1.73
PRKCD-204ENST00000477794 GIGYF1O75420 1035 aaPredicted RBP25.88■■□□□ 1.73
PRKCD-204ENST00000477794 MPRIPQ6WCQ1 1025 aa25.87■■□□□ 1.73
PRKCD-204ENST00000477794 NLGN2Q8NFZ4 835 aa25.87■■□□□ 1.73
PRKCD-204ENST00000477794 GOLGB1Q14789 3259 aaKnown RBP25.87■■□□□ 1.73
PRKCD-204ENST00000477794 AK7Q96M32 723 aa25.85■■□□□ 1.73
PRKCD-204ENST00000477794 SPG7Q9UQ90 795 aa25.85■■□□□ 1.73
PRKCD-204ENST00000477794 TUBGCP6Q96RT7 1819 aa25.85■■□□□ 1.73
PRKCD-204ENST00000477794 NSD3Q9BZ95 1437 aa25.85■■□□□ 1.73
PRKCD-204ENST00000477794 CD2APQ9Y5K6 639 aa25.84■■□□□ 1.73
PRKCD-204ENST00000477794 MSL1Q68DK7 614 aa25.83■■□□□ 1.73
PRKCD-204ENST00000477794 KIF20BQ96Q89 1820 aa25.83■■□□□ 1.73
PRKCD-204ENST00000477794 PPM1GO15355 546 aaPredicted RBP25.82■■□□□ 1.72
PRKCD-204ENST00000477794 CYP27B1O15528 508 aa25.81■■□□□ 1.72
PRKCD-204ENST00000477794 C5P01031 1676 aa25.8■■□□□ 1.72
PRKCD-204ENST00000477794 EMILIN1Q9Y6C2 1016 aa25.79■■□□□ 1.72
PRKCD-204ENST00000477794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.78■■□□□ 1.72
PRKCD-204ENST00000477794 TIMELESSQ9UNS1 1208 aa25.78■■□□□ 1.72
PRKCD-204ENST00000477794 YBX3P16989 372 aaKnown RBP eCLIP25.77■■□□□ 1.72
PRKCD-204ENST00000477794 TRIM26Q12899 539 aaPredicted RBP25.77■■□□□ 1.72
PRKCD-204ENST00000477794 NKX1-1Q15270 411 aaPredicted RBP25.76■■□□□ 1.71
PRKCD-204ENST00000477794 CARD14Q9BXL6 1004 aa25.76■■□□□ 1.71
PRKCD-204ENST00000477794 WASHC2AQ641Q2 1341 aa25.76■■□□□ 1.71
PRKCD-204ENST00000477794 PIGBQ92521 554 aa25.75■■□□□ 1.71
PRKCD-204ENST00000477794 TMOD3Q9NYL9 352 aa25.75■■□□□ 1.71
PRKCD-204ENST00000477794 SSFA2P28290 1259 aa25.73■■□□□ 1.71
PRKCD-204ENST00000477794 NCAPD2Q15021 1401 aa25.72■■□□□ 1.71
PRKCD-204ENST00000477794 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.72■■□□□ 1.71
PRKCD-204ENST00000477794 LOC102724428A0A0B4J2F2 783 aa25.72■■□□□ 1.71
PRKCD-204ENST00000477794 PHF14O94880 888 aa25.72■■□□□ 1.71
PRKCD-204ENST00000477794 SIK1P57059 783 aa25.72■■□□□ 1.71
PRKCD-204ENST00000477794 C4BP0C0L5 1744 aa25.71■■□□□ 1.71
PRKCD-204ENST00000477794 PKD1L3Q7Z443 1732 aa25.71■■□□□ 1.71
PRKCD-204ENST00000477794 IFNL2Q8IZJ0 200 aa25.71■■□□□ 1.71
PRKCD-204ENST00000477794 PLEKHG2Q9H7P9 1386 aa25.69■■□□□ 1.7
PRKCD-204ENST00000477794 EYA1Q99502 592 aa25.69■■□□□ 1.7
PRKCD-204ENST00000477794 TAF1LQ8IZX4 1826 aa25.69■■□□□ 1.7
PRKCD-204ENST00000477794 GPBP1L1Q9HC44 474 aaPredicted RBP25.67■■□□□ 1.7
PRKCD-204ENST00000477794 ATP10DQ9P241 1426 aa25.66■■□□□ 1.7
PRKCD-204ENST00000477794 ITGB4P16144 1822 aa25.66■■□□□ 1.7
PRKCD-204ENST00000477794 TOGARAM1Q9Y4F4 1720 aa25.66■■□□□ 1.7
PRKCD-204ENST00000477794 GNPATO15228 680 aa25.65■■□□□ 1.7
PRKCD-204ENST00000477794 PHKG2P15735 406 aa25.65■■□□□ 1.7
PRKCD-204ENST00000477794 ATP6V1AP38606 617 aa25.65■■□□□ 1.7
PRKCD-204ENST00000477794 POLKQ9UBT6 870 aa25.65■■□□□ 1.7
PRKCD-204ENST00000477794 ANKRD26Q9UPS8 1709 aa25.65■■□□□ 1.7
PRKCD-204ENST00000477794 IGSF1Q8N6C5 1336 aa25.64■■□□□ 1.7
PRKCD-204ENST00000477794 HSP90AB1P08238 724 aaKnown RBP25.64■■□□□ 1.7
PRKCD-204ENST00000477794 LINC00116Q8NCU8 138 aa25.64■■□□□ 1.7
PRKCD-204ENST00000477794 POLR3GLQ9BT43 218 aa25.64■■□□□ 1.7
PRKCD-204ENST00000477794 ASAP1Q9ULH1 1129 aa25.63■■□□□ 1.69
PRKCD-204ENST00000477794 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
PRKCD-204ENST00000477794 UBR3Q6ZT12 1888 aa25.6■■□□□ 1.69
PRKCD-204ENST00000477794 TNNT2P45379 298 aaPredicted RBP25.6■■□□□ 1.69
PRKCD-204ENST00000477794 EIF4A2Q14240 407 aaKnown RBP25.6■■□□□ 1.69
PRKCD-204ENST00000477794 ERVV-2B6SEH9 535 aa25.59■■□□□ 1.69
PRKCD-204ENST00000477794 AMIGO3Q86WK7 504 aa25.59■■□□□ 1.69
PRKCD-204ENST00000477794 RTCBQ9Y3I0 505 aaKnown RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms