RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 DDB1Q16531 1140 aa13.33□□□□□ -0.28
NIFK-205ENST00000477693 FAM196AQ6ZSG2 479 aa13.33□□□□□ -0.28
NIFK-205ENST00000477693 TNS2Q63HR2 1409 aa13.32□□□□□ -0.28
NIFK-205ENST00000477693 TNNT2P45379 298 aaPredicted RBP13.32□□□□□ -0.28
NIFK-205ENST00000477693 FAM182BQ5T319 152 aa13.32□□□□□ -0.28
NIFK-205ENST00000477693 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
NIFK-205ENST00000477693 OVOS2A0A0G2JMS6 1433 aa13.31□□□□□ -0.28
NIFK-205ENST00000477693 PPM1GO15355 546 aaPredicted RBP13.31□□□□□ -0.28
NIFK-205ENST00000477693 NBPF6Q5VWK0 638 aa13.31□□□□□ -0.28
NIFK-205ENST00000477693 NBPF4Q96M43 638 aa13.31□□□□□ -0.28
NIFK-205ENST00000477693 BCL9O00512 1426 aa13.3□□□□□ -0.28
NIFK-205ENST00000477693 NCAPD2Q15021 1401 aa13.3□□□□□ -0.28
NIFK-205ENST00000477693 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
NIFK-205ENST00000477693 EXOC5O00471 708 aa13.29□□□□□ -0.28
NIFK-205ENST00000477693 MARCH10Q8NA82 808 aaPredicted RBP13.29□□□□□ -0.28
NIFK-205ENST00000477693 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
NIFK-205ENST00000477693 RGPD2P0DJD1 1756 aa13.29□□□□□ -0.28
NIFK-205ENST00000477693 MEGF6O75095 1541 aa13.29□□□□□ -0.28
NIFK-205ENST00000477693 RGPD1P0DJD0 1748 aa13.28□□□□□ -0.28
NIFK-205ENST00000477693 SF3B2Q13435 895 aaKnown RBP13.28□□□□□ -0.28
NIFK-205ENST00000477693 CC2D1BQ5T0F9 858 aaKnown RBP13.28□□□□□ -0.28
NIFK-205ENST00000477693 EIF4A2Q14240 407 aaKnown RBP13.27□□□□□ -0.29
NIFK-205ENST00000477693 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.29
NIFK-205ENST00000477693 USHBP1Q8N6Y0 703 aa13.26□□□□□ -0.29
NIFK-205ENST00000477693 TRIM37O94972 964 aa13.25□□□□□ -0.29
NIFK-205ENST00000477693 RAPGEF4Q8WZA2 1011 aa13.25□□□□□ -0.29
NIFK-205ENST00000477693 EYA1Q99502 592 aa13.25□□□□□ -0.29
NIFK-205ENST00000477693 PLEKHG2Q9H7P9 1386 aa13.24□□□□□ -0.29
NIFK-205ENST00000477693 IGSF1Q8N6C5 1336 aa13.24□□□□□ -0.29
NIFK-205ENST00000477693 BAG6P46379 1132 aa13.24□□□□□ -0.29
NIFK-205ENST00000477693 DEFB132Q7Z7B7 95 aa13.24□□□□□ -0.29
NIFK-205ENST00000477693 SHANK3Q9BYB0 1731 aa13.23□□□□□ -0.29
NIFK-205ENST00000477693 TATP17735 454 aaPredicted RBP13.23□□□□□ -0.29
NIFK-205ENST00000477693 MTHFSP49914 203 aa13.23□□□□□ -0.29
NIFK-205ENST00000477693 ZCRB1Q8TBF4 217 aaKnown RBP13.23□□□□□ -0.29
NIFK-205ENST00000477693 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
NIFK-205ENST00000477693 ANP32CO43423 234 aa13.22□□□□□ -0.29
NIFK-205ENST00000477693 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
NIFK-205ENST00000477693 PARD3Q8TEW0 1356 aa13.21□□□□□ -0.29
NIFK-205ENST00000477693 IL13P35225 146 aa13.21□□□□□ -0.29
NIFK-205ENST00000477693 PKD1L3Q7Z443 1732 aa13.21□□□□□ -0.3
NIFK-205ENST00000477693 PCDH11XQ9BZA7 1347 aa13.2□□□□□ -0.3
NIFK-205ENST00000477693 PCDH11YQ9BZA8 1340 aa13.2□□□□□ -0.3
NIFK-205ENST00000477693 APBA3O96018 575 aa13.2□□□□□ -0.3
NIFK-205ENST00000477693 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
NIFK-205ENST00000477693 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
NIFK-205ENST00000477693 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■■■□ 19.5
NIFK-205ENST00000477693 NHSQ6T4R5 1651 aa13.2□□□□□ -0.3
NIFK-205ENST00000477693 KDRP35968 1356 aa13.2□□□□□ -0.3
NIFK-205ENST00000477693 COL3A1P02461 1466 aaPredicted RBP13.19□□□□□ -0.3
NIFK-205ENST00000477693 CNGB1Q14028 1251 aaPredicted RBP13.19□□□□□ -0.3
NIFK-205ENST00000477693 CAMKK2Q96RR4 588 aa13.19□□□□□ -0.3
NIFK-205ENST00000477693 LRP5O75197 1615 aa13.19□□□□□ -0.3
NIFK-205ENST00000477693 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
NIFK-205ENST00000477693 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
NIFK-205ENST00000477693 PLSCR1O15162 318 aa13.18□□□□□ -0.3
NIFK-205ENST00000477693 PTF1AQ7RTS3 328 aa13.18□□□□□ -0.3
NIFK-205ENST00000477693 CYP27B1O15528 508 aa13.17□□□□□ -0.3
NIFK-205ENST00000477693 KCNQ2O43526 872 aa13.17□□□□□ -0.3
NIFK-205ENST00000477693 PPP2R1AP30153 589 aa13.17□□□□□ -0.3
NIFK-205ENST00000477693 EZH2Q15910 746 aaKnown RBP13.17□□□□□ -0.3
NIFK-205ENST00000477693 ACSBG1Q96GR2 724 aa13.17□□□□□ -0.3
NIFK-205ENST00000477693 SPG7Q9UQ90 795 aa13.17□□□□□ -0.3
NIFK-205ENST00000477693 RREB1Q92766 1687 aa13.16□□□□□ -0.3
NIFK-205ENST00000477693 DIAPH1O60610 1272 aaKnown RBP13.16□□□□□ -0.3
NIFK-205ENST00000477693 RALBP1Q15311 655 aa13.16□□□□□ -0.3
NIFK-205ENST00000477693 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
NIFK-205ENST00000477693 SULT6B1Q6IMI4 303 aa13.15□□□□□ -0.3
NIFK-205ENST00000477693 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.3
NIFK-205ENST00000477693 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
NIFK-205ENST00000477693 CCER2I3L3R5 266 aa13.14□□□□□ -0.31
NIFK-205ENST00000477693 CFAP53Q96M91 514 aa13.14□□□□□ -0.31
NIFK-205ENST00000477693 PHKG2P15735 406 aa13.13□□□□□ -0.31
NIFK-205ENST00000477693 AMOTQ4VCS5 1084 aa13.13□□□□□ -0.31
NIFK-205ENST00000477693 PLEKHO1Q53GL0 409 aaPredicted RBP13.13□□□□□ -0.31
NIFK-205ENST00000477693 IFNL2Q8IZJ0 200 aa13.13□□□□□ -0.31
NIFK-205ENST00000477693 BTAF1O14981 1849 aa13.13□□□□□ -0.31
NIFK-205ENST00000477693 NUP188Q5SRE5 1749 aa13.13□□□□□ -0.31
NIFK-205ENST00000477693 PRIM1P49642 420 aaKnown RBP13.12□□□□□ -0.31
NIFK-205ENST00000477693 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
NIFK-205ENST00000477693 PRKRIP1Q9H875 184 aaPredicted RBP13.12□□□□□ -0.31
NIFK-205ENST00000477693 TOGARAM1Q9Y4F4 1720 aa13.12□□□□□ -0.31
NIFK-205ENST00000477693 PSDA5PKW4 1024 aaPredicted RBP13.11□□□□□ -0.31
NIFK-205ENST00000477693 HMOX1P09601 288 aa13.11□□□□□ -0.31
NIFK-205ENST00000477693 PROM2Q8N271 834 aa13.11□□□□□ -0.31
NIFK-205ENST00000477693 SYTL4Q96C24 671 aaPredicted RBP13.11□□□□□ -0.31
NIFK-205ENST00000477693 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
NIFK-205ENST00000477693 MIER1Q8N108 512 aa13.1□□□□□ -0.31
NIFK-205ENST00000477693 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
NIFK-205ENST00000477693 HSP90AB1P08238 724 aaKnown RBP13.09□□□□□ -0.31
NIFK-205ENST00000477693 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
NIFK-205ENST00000477693 DCAF5Q96JK2 942 aa13.09□□□□□ -0.31
NIFK-205ENST00000477693 NUDCQ9Y266 331 aa13.09□□□□□ -0.31
NIFK-205ENST00000477693 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
NIFK-205ENST00000477693 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
NIFK-205ENST00000477693 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
NIFK-205ENST00000477693 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
NIFK-205ENST00000477693 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
NIFK-205ENST00000477693 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
NIFK-205ENST00000477693 MYBBP1AQ9BQG0 1328 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms