RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 TSR2Q969E8 191 aaKnown RBP15.86■□□□□ 0.13
PRPF39-203ENST00000477626 SLAIN2Q9P270 581 aa15.86■□□□□ 0.13
PRPF39-203ENST00000477626 CFAP44Q96MT7 982 aa15.86■□□□□ 0.13
PRPF39-203ENST00000477626 FAM83GA6ND36 823 aa15.86■□□□□ 0.13
PRPF39-203ENST00000477626 ATF3P18847 181 aa15.86■□□□□ 0.13
PRPF39-203ENST00000477626 XPCQ01831 940 aaPredicted RBP15.86■□□□□ 0.13
PRPF39-203ENST00000477626 HTATSF1O43719 755 aaKnown RBP15.85■□□□□ 0.13
PRPF39-203ENST00000477626 MBIPQ9NS73 344 aa15.85■□□□□ 0.13
PRPF39-203ENST00000477626 TUBGCP6Q96RT7 1819 aa15.85■□□□□ 0.13
PRPF39-203ENST00000477626 PPM1GO15355 546 aaPredicted RBP15.85■□□□□ 0.13
PRPF39-203ENST00000477626 MYH16Q9H6N6 1097 aa15.85■□□□□ 0.13
PRPF39-203ENST00000477626 LRP6O75581 1613 aa15.84■□□□□ 0.13
PRPF39-203ENST00000477626 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
PRPF39-203ENST00000477626 VAMP4O75379 141 aa15.84■□□□□ 0.13
PRPF39-203ENST00000477626 THUMPD2Q9BTF0 503 aaKnown RBP15.84■□□□□ 0.13
PRPF39-203ENST00000477626 RLBP1P12271 317 aa15.83■□□□□ 0.12
PRPF39-203ENST00000477626 PDE3AQ14432 1141 aa15.83■□□□□ 0.12
PRPF39-203ENST00000477626 ITGB4P16144 1822 aa15.83■□□□□ 0.12
PRPF39-203ENST00000477626 KDM6AO15550 1401 aaPredicted RBP15.83■□□□□ 0.12
PRPF39-203ENST00000477626 MAP3K5Q99683 1374 aa15.83■□□□□ 0.12
PRPF39-203ENST00000477626 DISP2A7MBM2 1401 aa15.82■□□□□ 0.12
PRPF39-203ENST00000477626 EXOSC9Q06265 439 aaKnown RBP15.82■□□□□ 0.12
PRPF39-203ENST00000477626 CRBNQ96SW2 442 aa15.82■□□□□ 0.12
PRPF39-203ENST00000477626 NEUROD2Q15784 382 aa15.81■□□□□ 0.12
PRPF39-203ENST00000477626 ALDH1L2Q3SY69 923 aa15.81■□□□□ 0.12
PRPF39-203ENST00000477626 TNNQ9UQP3 1299 aa15.81■□□□□ 0.12
PRPF39-203ENST00000477626 TSPYL6Q8N831 410 aa15.81■□□□□ 0.12
PRPF39-203ENST00000477626 NUP188Q5SRE5 1749 aa15.8■□□□□ 0.12
PRPF39-203ENST00000477626 ZNF428Q96B54 188 aa15.8■□□□□ 0.12
PRPF39-203ENST00000477626 IL17REQ8NFR9 667 aa15.8■□□□□ 0.12
PRPF39-203ENST00000477626 PAK3O75914 559 aaPredicted RBP15.79■□□□□ 0.12
PRPF39-203ENST00000477626 AMPHP49418 695 aa15.79■□□□□ 0.12
PRPF39-203ENST00000477626 C14orf37Q86TY3 774 aa15.79■□□□□ 0.12
PRPF39-203ENST00000477626 SSH1Q8WYL5 1049 aa15.79■□□□□ 0.12
PRPF39-203ENST00000477626 NEFLP07196 543 aa15.79■□□□□ 0.12
PRPF39-203ENST00000477626 DCTN1Q14203 1278 aa15.79■□□□□ 0.12
PRPF39-203ENST00000477626 RREB1Q92766 1687 aa15.78■□□□□ 0.12
PRPF39-203ENST00000477626 C8orf58Q8NAV2 365 aa15.78■□□□□ 0.12
PRPF39-203ENST00000477626 BABAM1Q9NWV8 329 aa15.78■□□□□ 0.12
PRPF39-203ENST00000477626 MRPL50Q8N5N7 158 aaKnown RBP15.78■□□□□ 0.12
PRPF39-203ENST00000477626 LMOD3Q0VAK6 560 aa15.77■□□□□ 0.12
PRPF39-203ENST00000477626 LRRC59Q96AG4 307 aaKnown RBP15.77■□□□□ 0.12
PRPF39-203ENST00000477626 KCPQ6ZWJ8 1503 aa15.77■□□□□ 0.11
PRPF39-203ENST00000477626 ABCC4O15439 1325 aa15.76■□□□□ 0.11
PRPF39-203ENST00000477626 GNAI1P63096 354 aa15.76■□□□□ 0.11
PRPF39-203ENST00000477626 B4GALNT3Q6L9W6 998 aa15.76■□□□□ 0.11
PRPF39-203ENST00000477626 ANKRD24Q8TF21 1146 aa15.76■□□□□ 0.11
PRPF39-203ENST00000477626 MCM10Q7L590 875 aa15.76■□□□□ 0.11
PRPF39-203ENST00000477626 ZNF831Q5JPB2 1677 aa15.75■□□□□ 0.11
PRPF39-203ENST00000477626 PXDNLA1KZ92 1463 aa15.74■□□□□ 0.11
PRPF39-203ENST00000477626 SOX12O15370 315 aa15.74■□□□□ 0.11
PRPF39-203ENST00000477626 TRIM27P14373 513 aa15.74■□□□□ 0.11
PRPF39-203ENST00000477626 CALD1Q05682 793 aaKnown RBP15.74■□□□□ 0.11
PRPF39-203ENST00000477626 AEBP2Q6ZN18 517 aaPredicted RBP15.74■□□□□ 0.11
PRPF39-203ENST00000477626 USHBP1Q8N6Y0 703 aa15.74■□□□□ 0.11
PRPF39-203ENST00000477626 GAS2L2Q8NHY3 880 aa15.74■□□□□ 0.11
PRPF39-203ENST00000477626 ARHGAP45Q92619 1136 aa15.73■□□□□ 0.11
PRPF39-203ENST00000477626 TSHZ2Q9NRE2 1034 aa15.72■□□□□ 0.11
PRPF39-203ENST00000477626 TJP1Q07157 1748 aa15.72■□□□□ 0.11
PRPF39-203ENST00000477626 CABLES1Q8TDN4 633 aa15.72■□□□□ 0.11
PRPF39-203ENST00000477626 THSD7AQ9UPZ6 1657 aa15.72■□□□□ 0.11
PRPF39-203ENST00000477626 TNS2Q63HR2 1409 aa15.72■□□□□ 0.11
PRPF39-203ENST00000477626 GNAT3A8MTJ3 354 aa15.71■□□□□ 0.11
PRPF39-203ENST00000477626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.71■□□□□ 0.115e-7■■■■□ 22.8
PRPF39-203ENST00000477626 SOS1Q07889 1333 aaPredicted RBP15.71■□□□□ 0.11
PRPF39-203ENST00000477626 ARFGEF2Q9Y6D5 1785 aa15.71■□□□□ 0.11
PRPF39-203ENST00000477626 SLIT2O94813 1529 aa15.7■□□□□ 0.1
PRPF39-203ENST00000477626 KRT24Q2M2I5 525 aa15.7■□□□□ 0.1
PRPF39-203ENST00000477626 IBTKQ9P2D0 1353 aaPredicted RBP15.7■□□□□ 0.1
PRPF39-203ENST00000477626 DOT1LQ8TEK3 1739 aa15.7■□□□□ 0.1
PRPF39-203ENST00000477626 PANK1Q8TE04 598 aa15.69■□□□□ 0.1
PRPF39-203ENST00000477626 WDR17Q8IZU2 1322 aa15.69■□□□□ 0.1
PRPF39-203ENST00000477626 AKAP4Q5JQC9 854 aa15.69■□□□□ 0.1
PRPF39-203ENST00000477626 AAMPQ13685 434 aa15.69■□□□□ 0.1
PRPF39-203ENST00000477626 ATP10DQ9P241 1426 aa15.69■□□□□ 0.1
PRPF39-203ENST00000477626 ATF7IPQ6VMQ6 1270 aa15.68■□□□□ 0.1
PRPF39-203ENST00000477626 MVPQ14764 893 aaKnown RBP15.68■□□□□ 0.1
PRPF39-203ENST00000477626 NOB1Q9ULX3 412 aaKnown RBP15.68■□□□□ 0.1
PRPF39-203ENST00000477626 LGR6Q9HBX8 967 aa15.67■□□□□ 0.1
PRPF39-203ENST00000477626 COL5A3P25940 1745 aaPredicted RBP15.66■□□□□ 0.1
PRPF39-203ENST00000477626 IGHDP01880 384 aa15.66■□□□□ 0.1
PRPF39-203ENST00000477626 AMOTQ4VCS5 1084 aa15.66■□□□□ 0.1
PRPF39-203ENST00000477626 ZBTB40Q9NUA8 1239 aa15.66■□□□□ 0.1
PRPF39-203ENST00000477626 PCDHB15Q9Y5E8 787 aa15.66■□□□□ 0.1
PRPF39-203ENST00000477626 TWISTNBQ3B726 338 aaPredicted RBP15.66■□□□□ 0.1
PRPF39-203ENST00000477626 KIF16BQ96L93 1317 aa15.66■□□□□ 0.1
PRPF39-203ENST00000477626 ZC3H6P61129 1189 aaKnown RBP15.65■□□□□ 0.1
PRPF39-203ENST00000477626 NKX1-1Q15270 411 aaPredicted RBP15.65■□□□□ 0.1
PRPF39-203ENST00000477626 BCL2L13Q9BXK5 485 aa15.65■□□□□ 0.1
PRPF39-203ENST00000477626 RNMTO43148 476 aaKnown RBP15.65■□□□□ 0.1
PRPF39-203ENST00000477626 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.64■□□□□ 0.09
PRPF39-203ENST00000477626 ZKSCAN2Q63HK3 967 aa15.64■□□□□ 0.09
PRPF39-203ENST00000477626 LRP10Q7Z4F1 713 aa15.64■□□□□ 0.09
PRPF39-203ENST00000477626 CYP27B1O15528 508 aa15.63■□□□□ 0.09
PRPF39-203ENST00000477626 EIF4A1P60842 406 aaKnown RBP15.63■□□□□ 0.09
PRPF39-203ENST00000477626 CLUAP1Q96AJ1 413 aa15.63■□□□□ 0.09
PRPF39-203ENST00000477626 ZBTB7BO15156 539 aaPredicted RBP15.63■□□□□ 0.09
PRPF39-203ENST00000477626 PHKG2P15735 406 aa15.63■□□□□ 0.09
PRPF39-203ENST00000477626 INTS3Q68E01 1043 aaKnown RBP15.62■□□□□ 0.09
PRPF39-203ENST00000477626 LTV1Q96GA3 475 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms