RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 KDRP35968 1356 aa15.35■□□□□ 0.05
TNRC6A-206ENST00000477487 ANKRD24Q8TF21 1146 aa15.35■□□□□ 0.05
TNRC6A-206ENST00000477487 MBIPQ9NS73 344 aa15.35■□□□□ 0.05
TNRC6A-206ENST00000477487 PANK1Q8TE04 598 aa15.35■□□□□ 0.05
TNRC6A-206ENST00000477487 SKAP1Q86WV1 359 aa15.34■□□□□ 0.05
TNRC6A-206ENST00000477487 CLUAP1Q96AJ1 413 aa15.34■□□□□ 0.05
TNRC6A-206ENST00000477487 MYH16Q9H6N6 1097 aa15.34■□□□□ 0.05
TNRC6A-206ENST00000477487 PHRF1Q9P1Y6 1649 aaKnown RBP15.33■□□□□ 0.05
TNRC6A-206ENST00000477487 RLBP1P12271 317 aa15.33■□□□□ 0.05
TNRC6A-206ENST00000477487 KIAA0232Q92628 1395 aa15.33■□□□□ 0.04
TNRC6A-206ENST00000477487 C8orf58Q8NAV2 365 aa15.32■□□□□ 0.04
TNRC6A-206ENST00000477487 SSH1Q8WYL5 1049 aa15.32■□□□□ 0.04
TNRC6A-206ENST00000477487 SOS2Q07890 1332 aaPredicted RBP15.32■□□□□ 0.04
TNRC6A-206ENST00000477487 ZNF853P0CG23 659 aa15.31■□□□□ 0.04
TNRC6A-206ENST00000477487 CRYBG1Q9Y4K1 1723 aa15.31■□□□□ 0.04
TNRC6A-206ENST00000477487 RTL1A6NKG5 1358 aa15.31■□□□□ 0.04
TNRC6A-206ENST00000477487 LTBP4Q8N2S1 1624 aa15.31■□□□□ 0.04
TNRC6A-206ENST00000477487 KIF24Q5T7B8 1368 aa15.29■□□□□ 0.04
TNRC6A-206ENST00000477487 IL17REQ8NFR9 667 aa15.29■□□□□ 0.04
TNRC6A-206ENST00000477487 CCDC136Q96JN2 1154 aa15.29■□□□□ 0.04
TNRC6A-206ENST00000477487 LGR6Q9HBX8 967 aa15.29■□□□□ 0.04
TNRC6A-206ENST00000477487 TSHZ2Q9NRE2 1034 aa15.29■□□□□ 0.04
TNRC6A-206ENST00000477487 COG6Q9Y2V7 657 aa15.29■□□□□ 0.04
TNRC6A-206ENST00000477487 ERBB3P21860 1342 aa15.29■□□□□ 0.04
TNRC6A-206ENST00000477487 COL18A1P39060 1754 aa15.29■□□□□ 0.04
TNRC6A-206ENST00000477487 IL16Q14005 1332 aa15.29■□□□□ 0.04
TNRC6A-206ENST00000477487 NLRP2Q9NX02 1062 aa15.28■□□□□ 0.04
TNRC6A-206ENST00000477487 SMC4Q9NTJ3 1288 aa15.28■□□□□ 0.04
TNRC6A-206ENST00000477487 CRB1P82279 1406 aa15.28■□□□□ 0.04
TNRC6A-206ENST00000477487 CFAP44Q96MT7 982 aa15.27■□□□□ 0.04
TNRC6A-206ENST00000477487 CANXP27824 592 aaKnown RBP15.27■□□□□ 0.03
TNRC6A-206ENST00000477487 PIP4K2BP78356 416 aa15.27■□□□□ 0.03
TNRC6A-206ENST00000477487 IFT57Q9NWB7 429 aa15.27■□□□□ 0.03
TNRC6A-206ENST00000477487 ROBO1Q9Y6N7 1651 aa15.26■□□□□ 0.03
TNRC6A-206ENST00000477487 VAMP4O75379 141 aa15.26■□□□□ 0.03
TNRC6A-206ENST00000477487 GNAI1P63096 354 aa15.25■□□□□ 0.03
TNRC6A-206ENST00000477487 ERICH6BQ5W0A0 696 aa15.25■□□□□ 0.03
TNRC6A-206ENST00000477487 MPRIPQ6WCQ1 1025 aa15.25■□□□□ 0.03
TNRC6A-206ENST00000477487 CSB-PGBD3P0DP91 1061 aa15.25■□□□□ 0.03
TNRC6A-206ENST00000477487 NOB1Q9ULX3 412 aaKnown RBP15.25■□□□□ 0.03
TNRC6A-206ENST00000477487 NHSL1Q5SYE7 1610 aa15.25■□□□□ 0.03
TNRC6A-206ENST00000477487 PRDM11Q9NQV5 511 aa15.24■□□□□ 0.03
TNRC6A-206ENST00000477487 GNAT3A8MTJ3 354 aa15.24■□□□□ 0.03
TNRC6A-206ENST00000477487 CHL1O00533 1208 aa15.24■□□□□ 0.03
TNRC6A-206ENST00000477487 CAMTA1Q9Y6Y1 1673 aa15.24■□□□□ 0.03
TNRC6A-206ENST00000477487 LMOD3Q0VAK6 560 aa15.23■□□□□ 0.03
TNRC6A-206ENST00000477487 TWISTNBQ3B726 338 aaPredicted RBP15.23■□□□□ 0.03
TNRC6A-206ENST00000477487 RTF1Q92541 710 aaKnown RBP15.23■□□□□ 0.03
TNRC6A-206ENST00000477487 KCNQ3O43525 872 aa15.23■□□□□ 0.03
TNRC6A-206ENST00000477487 ZNF530Q6P9A1 599 aaPredicted RBP15.23■□□□□ 0.03
TNRC6A-206ENST00000477487 GAS2L2Q8NHY3 880 aa15.23■□□□□ 0.03
TNRC6A-206ENST00000477487 NECTIN2Q92692 538 aa15.23■□□□□ 0.03
TNRC6A-206ENST00000477487 ABCA3Q99758 1704 aa15.23■□□□□ 0.03
TNRC6A-206ENST00000477487 MEGF6O75095 1541 aa15.22■□□□□ 0.03
TNRC6A-206ENST00000477487 TRIM27P14373 513 aa15.22■□□□□ 0.03
TNRC6A-206ENST00000477487 STRN4Q9NRL3 753 aa15.22■□□□□ 0.03
TNRC6A-206ENST00000477487 MAP3K5Q99683 1374 aa15.22■□□□□ 0.03
TNRC6A-206ENST00000477487 PDIA4P13667 645 aaKnown RBP15.21■□□□□ 0.03
TNRC6A-206ENST00000477487 USP35Q9P2H5 1018 aa15.21■□□□□ 0.03
TNRC6A-206ENST00000477487 TSPYL4Q9UJ04 414 aa15.21■□□□□ 0.03
TNRC6A-206ENST00000477487 FAM208AQ9UK61 1670 aaKnown RBP15.21■□□□□ 0.03
TNRC6A-206ENST00000477487 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.2■□□□□ 0.02
TNRC6A-206ENST00000477487 NCAPD2Q15021 1401 aa15.19■□□□□ 0.02
TNRC6A-206ENST00000477487 LARP1Q6PKG0 1096 aaKnown RBP15.19■□□□□ 0.02
TNRC6A-206ENST00000477487 MRPL50Q8N5N7 158 aaKnown RBP15.19■□□□□ 0.02
TNRC6A-206ENST00000477487 LMO7Q8WWI1 1683 aa15.19■□□□□ 0.02
TNRC6A-206ENST00000477487 CALD1Q05682 793 aaKnown RBP15.18■□□□□ 0.02
TNRC6A-206ENST00000477487 VIRMAQ69YN4 1812 aaKnown RBP15.18■□□□□ 0.02
TNRC6A-206ENST00000477487 CPDO75976 1380 aa15.18■□□□□ 0.02
TNRC6A-206ENST00000477487 LRRC37A3O60309 1634 aa15.17■□□□□ 0.02
TNRC6A-206ENST00000477487 ZKSCAN2Q63HK3 967 aa15.17■□□□□ 0.02
TNRC6A-206ENST00000477487 TMEM57Q8N5G2 664 aa15.17■□□□□ 0.02
TNRC6A-206ENST00000477487 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
TNRC6A-206ENST00000477487 IGHDP01880 384 aa15.16■□□□□ 0.02
TNRC6A-206ENST00000477487 ADAMTS2O95450 1211 aa15.16■□□□□ 0.02
TNRC6A-206ENST00000477487 PDE3AQ14432 1141 aa15.16■□□□□ 0.02
TNRC6A-206ENST00000477487 PLEKHO1Q53GL0 409 aaPredicted RBP15.16■□□□□ 0.02
TNRC6A-206ENST00000477487 ATF7IPQ6VMQ6 1270 aa15.16■□□□□ 0.02
TNRC6A-206ENST00000477487 TOM1L2Q6ZVM7 507 aa15.16■□□□□ 0.02
TNRC6A-206ENST00000477487 G2E3Q7L622 706 aa15.16■□□□□ 0.02
TNRC6A-206ENST00000477487 PRAMEF22A3QJZ6 481 aa15.16■□□□□ 0.02
TNRC6A-206ENST00000477487 DZIP1LQ8IYY4 767 aaKnown RBP15.16■□□□□ 0.02
TNRC6A-206ENST00000477487 PCDHB15Q9Y5E8 787 aa15.16■□□□□ 0.02
TNRC6A-206ENST00000477487 COL5A2P05997 1499 aaPredicted RBP15.15■□□□□ 0.02
TNRC6A-206ENST00000477487 RAPGEF4Q8WZA2 1011 aa15.15■□□□□ 0.02
TNRC6A-206ENST00000477487 CEMIPQ8WUJ3 1361 aa15.15■□□□□ 0.02
TNRC6A-206ENST00000477487 NUTM2BA6NNL0 878 aaPredicted RBP15.15■□□□□ 0.02
TNRC6A-206ENST00000477487 NUTM2EB1AL46 878 aaPredicted RBP15.15■□□□□ 0.02
TNRC6A-206ENST00000477487 CYP27B1O15528 508 aa15.15■□□□□ 0.02
TNRC6A-206ENST00000477487 RNMTO43148 476 aaKnown RBP15.15■□□□□ 0.02
TNRC6A-206ENST00000477487 NUTM2AQ8IVF1 878 aaPredicted RBP15.15■□□□□ 0.02
TNRC6A-206ENST00000477487 BTG4Q9NY30 223 aa15.15■□□□□ 0.02
TNRC6A-206ENST00000477487 AKAP4Q5JQC9 854 aa15.14■□□□□ 0.01
TNRC6A-206ENST00000477487 FTSJ3Q8IY81 847 aaKnown RBP15.14■□□□□ 0.01
TNRC6A-206ENST00000477487 ANO8Q9HCE9 1232 aaPredicted RBP15.14■□□□□ 0.01
TNRC6A-206ENST00000477487 CT47B1P0C2W7 299 aaPredicted RBP15.14■□□□□ 0.01
TNRC6A-206ENST00000477487 SLC39A6Q13433 755 aa15.14■□□□□ 0.01
TNRC6A-206ENST00000477487 TAF7Q15545 349 aaPredicted RBP15.14■□□□□ 0.01
TNRC6A-206ENST00000477487 ITPRIPQ8IWB1 547 aa15.14■□□□□ 0.01
TNRC6A-206ENST00000477487 UBAP1LF5GYI3 381 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms