RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 GNAT3A8MTJ3 354 aa17.16■□□□□ 0.34
SEC22A-205ENST00000477063 MS4A1P11836 297 aa17.16■□□□□ 0.34
SEC22A-205ENST00000477063 ALDH1L2Q3SY69 923 aa17.16■□□□□ 0.34
SEC22A-205ENST00000477063 SOS1Q07889 1333 aaPredicted RBP17.16■□□□□ 0.34
SEC22A-205ENST00000477063 RARSP54136 660 aaKnown RBP17.15■□□□□ 0.34
SEC22A-205ENST00000477063 BRPF1P55201 1214 aaPredicted RBP17.15■□□□□ 0.34
SEC22A-205ENST00000477063 AAMPQ13685 434 aa17.15■□□□□ 0.34
SEC22A-205ENST00000477063 PDE3AQ14432 1141 aa17.15■□□□□ 0.34
SEC22A-205ENST00000477063 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
SEC22A-205ENST00000477063 CRB1P82279 1406 aa17.14■□□□□ 0.33
SEC22A-205ENST00000477063 PHLPP1O60346 1717 aa17.14■□□□□ 0.33
SEC22A-205ENST00000477063 COL14A1Q05707 1796 aaKnown RBP17.14■□□□□ 0.33
SEC22A-205ENST00000477063 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
SEC22A-205ENST00000477063 ZBTB7CA1YPR0 619 aa17.13■□□□□ 0.33
SEC22A-205ENST00000477063 CHL1O00533 1208 aa17.13■□□□□ 0.33
SEC22A-205ENST00000477063 PRDM11Q9NQV5 511 aa17.13■□□□□ 0.33
SEC22A-205ENST00000477063 ADAMTS7Q9UKP4 1686 aa17.13■□□□□ 0.33
SEC22A-205ENST00000477063 EXOSC9Q06265 439 aaKnown RBP17.12■□□□□ 0.33
SEC22A-205ENST00000477063 AKAP4Q5JQC9 854 aa17.12■□□□□ 0.33
SEC22A-205ENST00000477063 WDR17Q8IZU2 1322 aa17.12■□□□□ 0.33
SEC22A-205ENST00000477063 CEMIPQ8WUJ3 1361 aa17.12■□□□□ 0.33
SEC22A-205ENST00000477063 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
SEC22A-205ENST00000477063 PKD1L3Q7Z443 1732 aa17.11■□□□□ 0.33
SEC22A-205ENST00000477063 PARP4Q9UKK3 1724 aaKnown RBP17.11■□□□□ 0.33
SEC22A-205ENST00000477063 CABLES1Q8TDN4 633 aa17.11■□□□□ 0.33
SEC22A-205ENST00000477063 TSR2Q969E8 191 aaKnown RBP17.11■□□□□ 0.33
SEC22A-205ENST00000477063 MBIPQ9NS73 344 aa17.11■□□□□ 0.33
SEC22A-205ENST00000477063 KIF16BQ96L93 1317 aa17.11■□□□□ 0.33
SEC22A-205ENST00000477063 RAPGEF4Q8WZA2 1011 aa17.1■□□□□ 0.33
SEC22A-205ENST00000477063 CHMP4AQ9BY43 222 aa17.1■□□□□ 0.33
SEC22A-205ENST00000477063 FAM83GA6ND36 823 aa17.09■□□□□ 0.33
SEC22A-205ENST00000477063 TATP17735 454 aaPredicted RBP17.09■□□□□ 0.33
SEC22A-205ENST00000477063 IPO8O15397 1037 aaKnown RBP17.08■□□□□ 0.32
SEC22A-205ENST00000477063 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.32
SEC22A-205ENST00000477063 C1orf141Q5JVX7 400 aa17.08■□□□□ 0.32
SEC22A-205ENST00000477063 USHBP1Q8N6Y0 703 aa17.08■□□□□ 0.32
SEC22A-205ENST00000477063 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.32
SEC22A-205ENST00000477063 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
SEC22A-205ENST00000477063 IRX6P78412 446 aaPredicted RBP17.07■□□□□ 0.32
SEC22A-205ENST00000477063 MCM10Q7L590 875 aa17.07■□□□□ 0.32
SEC22A-205ENST00000477063 THUMPD2Q9BTF0 503 aaKnown RBP17.07■□□□□ 0.32
SEC22A-205ENST00000477063 CARD10Q9BWT7 1032 aa17.07■□□□□ 0.32
SEC22A-205ENST00000477063 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
SEC22A-205ENST00000477063 VAMP4O75379 141 aa17.06■□□□□ 0.32
SEC22A-205ENST00000477063 BCAR3O75815 825 aa17.06■□□□□ 0.32
SEC22A-205ENST00000477063 HSP90AB1P08238 724 aaKnown RBP17.06■□□□□ 0.32
SEC22A-205ENST00000477063 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
SEC22A-205ENST00000477063 TAF7Q15545 349 aaPredicted RBP17.06■□□□□ 0.32
SEC22A-205ENST00000477063 ZNF530Q6P9A1 599 aaPredicted RBP17.06■□□□□ 0.32
SEC22A-205ENST00000477063 ARHGAP45Q92619 1136 aa17.06■□□□□ 0.32
SEC22A-205ENST00000477063 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
SEC22A-205ENST00000477063 CACNA1FO60840 1977 aa17.06■□□□□ 0.32
SEC22A-205ENST00000477063 DCTN1Q14203 1278 aa17.05■□□□□ 0.32
SEC22A-205ENST00000477063 CHRNA2Q15822 529 aa17.05■□□□□ 0.32
SEC22A-205ENST00000477063 TWISTNBQ3B726 338 aaPredicted RBP17.05■□□□□ 0.32
SEC22A-205ENST00000477063 ZKSCAN2Q63HK3 967 aa17.05■□□□□ 0.32
SEC22A-205ENST00000477063 SMC4Q9NTJ3 1288 aa17.05■□□□□ 0.32
SEC22A-205ENST00000477063 IL17REQ8NFR9 667 aa17.04■□□□□ 0.32
SEC22A-205ENST00000477063 TSPYL4Q9UJ04 414 aa17.04■□□□□ 0.32
SEC22A-205ENST00000477063 KDM3BQ7LBC6 1761 aa17.04■□□□□ 0.32
SEC22A-205ENST00000477063 SCN11AQ9UI33 1791 aa17.04■□□□□ 0.32
SEC22A-205ENST00000477063 SIPA1L3O60292 1781 aaPredicted RBP17.03■□□□□ 0.32
SEC22A-205ENST00000477063 SSH1Q8WYL5 1049 aa17.03■□□□□ 0.32
SEC22A-205ENST00000477063 PLCH1Q4KWH8 1693 aa17.03■□□□□ 0.32
SEC22A-205ENST00000477063 MEGF6O75095 1541 aa17.02■□□□□ 0.32
SEC22A-205ENST00000477063 NWD2Q9ULI1 1742 aa17.02■□□□□ 0.32
SEC22A-205ENST00000477063 PLIN1O60240 522 aa17.02■□□□□ 0.32
SEC22A-205ENST00000477063 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
SEC22A-205ENST00000477063 HOXB7P09629 217 aa17.02■□□□□ 0.32
SEC22A-205ENST00000477063 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
SEC22A-205ENST00000477063 MRC1P22897 1456 aa17.01■□□□□ 0.31
SEC22A-205ENST00000477063 UBAP1LF5GYI3 381 aa17.01■□□□□ 0.31
SEC22A-205ENST00000477063 TOM1L2Q6ZVM7 507 aa17.01■□□□□ 0.31
SEC22A-205ENST00000477063 EXOC6Q8TAG9 804 aa17.01■□□□□ 0.31
SEC22A-205ENST00000477063 CCDC136Q96JN2 1154 aa17.01■□□□□ 0.31
SEC22A-205ENST00000477063 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
SEC22A-205ENST00000477063 RNMTO43148 476 aaKnown RBP17■□□□□ 0.31
SEC22A-205ENST00000477063 EVA1CP58658 441 aa17■□□□□ 0.31
SEC22A-205ENST00000477063 TEFQ10587 303 aa17■□□□□ 0.31
SEC22A-205ENST00000477063 ATF7IPQ6VMQ6 1270 aa17■□□□□ 0.31
SEC22A-205ENST00000477063 CRBNQ96SW2 442 aa17■□□□□ 0.31
SEC22A-205ENST00000477063 PCDH11XQ9BZA7 1347 aa16.98■□□□□ 0.31
SEC22A-205ENST00000477063 PCDH11YQ9BZA8 1340 aa16.98■□□□□ 0.31
SEC22A-205ENST00000477063 IL2RBP14784 551 aa16.98■□□□□ 0.31
SEC22A-205ENST00000477063 PHKG2P15735 406 aa16.98■□□□□ 0.31
SEC22A-205ENST00000477063 DZIP1LQ8IYY4 767 aaKnown RBP16.98■□□□□ 0.31
SEC22A-205ENST00000477063 MRPL50Q8N5N7 158 aaKnown RBP16.98■□□□□ 0.31
SEC22A-205ENST00000477063 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
SEC22A-205ENST00000477063 FRAT1Q92837 279 aaPredicted RBP16.98■□□□□ 0.31
SEC22A-205ENST00000477063 DCAF5Q96JK2 942 aa16.98■□□□□ 0.31
SEC22A-205ENST00000477063 JCADQ9P266 1359 aa16.98■□□□□ 0.31
SEC22A-205ENST00000477063 NRAPQ86VF7 1730 aa16.97■□□□□ 0.31
SEC22A-205ENST00000477063 FTSJ3Q8IY81 847 aaKnown RBP16.97■□□□□ 0.31
SEC22A-205ENST00000477063 CDCA7Q9BWT1 371 aaPredicted RBP16.97■□□□□ 0.31
SEC22A-205ENST00000477063 API5Q9BZZ5 524 aaKnown RBP16.97■□□□□ 0.31
SEC22A-205ENST00000477063 PTPRCP08575 1304 aa16.96■□□□□ 0.31
SEC22A-205ENST00000477063 WNK3Q9BYP7 1800 aa16.96■□□□□ 0.31
SEC22A-205ENST00000477063 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
SEC22A-205ENST00000477063 TSPYL6Q8N831 410 aa16.96■□□□□ 0.31
SEC22A-205ENST00000477063 MVPQ14764 893 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms