RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 ACEP12821 1306 aa11.72□□□□□ -0.53
GSDMB-208ENST00000477054 FBLN1P23142 703 aa11.72□□□□□ -0.53
GSDMB-208ENST00000477054 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
GSDMB-208ENST00000477054 TNNQ9UQP3 1299 aa11.72□□□□□ -0.53
GSDMB-208ENST00000477054 PLXNC1O60486 1568 aa11.72□□□□□ -0.53
GSDMB-208ENST00000477054 FAM83GA6ND36 823 aa11.72□□□□□ -0.53
GSDMB-208ENST00000477054 SRGAP3O43295 1099 aa11.72□□□□□ -0.53
GSDMB-208ENST00000477054 TAF3Q5VWG9 929 aa11.72□□□□□ -0.53
GSDMB-208ENST00000477054 PROSER2Q86WR7 435 aaPredicted RBP11.72□□□□□ -0.53
GSDMB-208ENST00000477054 CCDC34Q96HJ3 373 aa11.72□□□□□ -0.53
GSDMB-208ENST00000477054 EXOC6BQ9Y2D4 811 aa11.72□□□□□ -0.53
GSDMB-208ENST00000477054 TAF7Q15545 349 aaPredicted RBP11.71□□□□□ -0.53
GSDMB-208ENST00000477054 ZSCAN30Q86W11 494 aa11.71□□□□□ -0.53
GSDMB-208ENST00000477054 MRPL50Q8N5N7 158 aaKnown RBP11.71□□□□□ -0.53
GSDMB-208ENST00000477054 MYOM2P54296 1465 aa11.71□□□□□ -0.53
GSDMB-208ENST00000477054 UQCRHLA0A096LP55 91 aa11.71□□□□□ -0.54
GSDMB-208ENST00000477054 BTBD11A6QL63 1104 aa11.71□□□□□ -0.54
GSDMB-208ENST00000477054 UQCRHP07919 91 aa11.71□□□□□ -0.54
GSDMB-208ENST00000477054 TATP17735 454 aaPredicted RBP11.71□□□□□ -0.54
GSDMB-208ENST00000477054 MX1P20591 662 aa11.71□□□□□ -0.54
GSDMB-208ENST00000477054 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.54
GSDMB-208ENST00000477054 SMARCA5O60264 1052 aaPredicted RBP11.7□□□□□ -0.54
GSDMB-208ENST00000477054 IQGAP3Q86VI3 1631 aa11.7□□□□□ -0.54
GSDMB-208ENST00000477054 NPATQ14207 1427 aa11.7□□□□□ -0.54
GSDMB-208ENST00000477054 GOLGA6L19H0YKK7 550 aa11.7□□□□□ -0.54
GSDMB-208ENST00000477054 RRAGDQ9NQL2 400 aaPredicted RBP11.7□□□□□ -0.54
GSDMB-208ENST00000477054 CCDC39Q9UFE4 941 aa11.7□□□□□ -0.54
GSDMB-208ENST00000477054 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
GSDMB-208ENST00000477054 RAB11FIP3O75154 756 aa11.69□□□□□ -0.54
GSDMB-208ENST00000477054 LETM1O95202 739 aaPredicted RBP11.69□□□□□ -0.54
GSDMB-208ENST00000477054 IL1RAPL2Q9NP60 686 aa11.69□□□□□ -0.54
GSDMB-208ENST00000477054 TTC21AQ8NDW8 1320 aa11.69□□□□□ -0.54
GSDMB-208ENST00000477054 HMGN5P82970 282 aaKnown RBP11.69□□□□□ -0.54
GSDMB-208ENST00000477054 BICD2Q8TD16 824 aa11.69□□□□□ -0.54
GSDMB-208ENST00000477054 WDR33Q9C0J8 1336 aaKnown RBP11.69□□□□□ -0.54
GSDMB-208ENST00000477054 ERVK-7P63135 1459 aa11.69□□□□□ -0.54
GSDMB-208ENST00000477054 BCORL1Q5H9F3 1711 aa11.69□□□□□ -0.54
GSDMB-208ENST00000477054 F6X3S4 739 aa11.69□□□□□ -0.54
GSDMB-208ENST00000477054 CPLX2Q6PUV4 134 aaKnown RBP11.69□□□□□ -0.54
GSDMB-208ENST00000477054 NEUROD6Q96NK8 337 aa11.69□□□□□ -0.54
GSDMB-208ENST00000477054 ZBTB40Q9NUA8 1239 aa11.69□□□□□ -0.54
GSDMB-208ENST00000477054 PDCP20941 246 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 SMC5Q8IY18 1101 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 TOMM22Q9NS69 142 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 ZCCHC11Q5TAX3 1644 aaKnown RBP11.68□□□□□ -0.54
GSDMB-208ENST00000477054 BECN2A8MW95 431 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 VAMP4O75379 141 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 KIF1BPQ96EK5 621 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 CCDC66A2RUB6 948 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 FLIIQ13045 1269 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 CYP46A1Q9Y6A2 500 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 CHD1O14646 1710 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 NEO1Q92859 1461 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 TTC22Q5TAA0 569 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 SPG7Q9UQ90 795 aa11.68□□□□□ -0.54
GSDMB-208ENST00000477054 UNC13BO14795 1591 aa11.67□□□□□ -0.54
GSDMB-208ENST00000477054 SHROOM2Q13796 1616 aa11.67□□□□□ -0.54
GSDMB-208ENST00000477054 PHF8Q9UPP1 1060 aa11.67□□□□□ -0.54
GSDMB-208ENST00000477054 CFAP74Q9C0B2 1584 aa11.67□□□□□ -0.54
GSDMB-208ENST00000477054 TRPM1Q7Z4N2 1603 aa11.67□□□□□ -0.54
GSDMB-208ENST00000477054 C8orf58Q8NAV2 365 aa11.67□□□□□ -0.54
GSDMB-208ENST00000477054 TSPY26PQ9H489 355 aa11.67□□□□□ -0.54
GSDMB-208ENST00000477054 CPLX1O14810 134 aa11.66□□□□□ -0.54
GSDMB-208ENST00000477054 MAP4K4O95819 1239 aaPredicted RBP11.66□□□□□ -0.54
GSDMB-208ENST00000477054 XRCC6P12956 609 aaKnown RBP eCLIP11.66□□□□□ -0.54
GSDMB-208ENST00000477054 EIF4A2Q14240 407 aaKnown RBP11.66□□□□□ -0.54
GSDMB-208ENST00000477054 AMOTQ4VCS5 1084 aa11.66□□□□□ -0.54
GSDMB-208ENST00000477054 HSP90AB2PQ58FF8 381 aa11.66□□□□□ -0.54
GSDMB-208ENST00000477054 AEBP1Q8IUX7 1158 aa11.66□□□□□ -0.54
GSDMB-208ENST00000477054 TRMT2AQ8IZ69 625 aaKnown RBP11.66□□□□□ -0.54
GSDMB-208ENST00000477054 CEBPAP49715 358 aaPredicted RBP11.66□□□□□ -0.54
GSDMB-208ENST00000477054 TRDNQ13061 729 aa11.66□□□□□ -0.54
GSDMB-208ENST00000477054 RNF214Q8ND24 703 aa11.66□□□□□ -0.54
GSDMB-208ENST00000477054 TNPO1Q92973 898 aaKnown RBP11.66□□□□□ -0.54
GSDMB-208ENST00000477054 ZNF521Q96K83 1311 aa11.66□□□□□ -0.54
GSDMB-208ENST00000477054 ANKRD44Q8N8A2 993 aa11.66□□□□□ -0.54
GSDMB-208ENST00000477054 PHACTR3Q96KR7 559 aa11.66□□□□□ -0.54
GSDMB-208ENST00000477054 AACSQ86V21 672 aa11.65□□□□□ -0.54
GSDMB-208ENST00000477054 NUTM1Q86Y26 1132 aa11.65□□□□□ -0.54
GSDMB-208ENST00000477054 ZRANB1Q9UGI0 708 aa11.65□□□□□ -0.54
GSDMB-208ENST00000477054 ZFYVE16Q7Z3T8 1539 aa11.65□□□□□ -0.54
GSDMB-208ENST00000477054 ANKRD1Q15327 319 aa11.65□□□□□ -0.54
GSDMB-208ENST00000477054 SYNE3Q6ZMZ3 975 aa11.65□□□□□ -0.54
GSDMB-208ENST00000477054 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.54
GSDMB-208ENST00000477054 LRRFIP2Q9Y608 721 aaKnown RBP11.65□□□□□ -0.54
GSDMB-208ENST00000477054 SASS6Q6UVJ0 657 aa11.65□□□□□ -0.54
GSDMB-208ENST00000477054 GLRX3O76003 335 aaKnown RBP11.65□□□□□ -0.55
GSDMB-208ENST00000477054 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.55
GSDMB-208ENST00000477054 DNAJC2Q99543 621 aaKnown RBP11.65□□□□□ -0.55
GSDMB-208ENST00000477054 ZHX1Q9UKY1 873 aaPredicted RBP11.65□□□□□ -0.55
GSDMB-208ENST00000477054 EDC4Q6P2E9 1401 aaKnown RBP11.64□□□□□ -0.55
GSDMB-208ENST00000477054 TSPYL6Q8N831 410 aa11.64□□□□□ -0.55
GSDMB-208ENST00000477054 TET3O43151 1660 aa11.64□□□□□ -0.55
GSDMB-208ENST00000477054 CWC27Q6UX04 472 aaKnown RBP11.64□□□□□ -0.55
GSDMB-208ENST00000477054 USHBP1Q8N6Y0 703 aa11.64□□□□□ -0.55
GSDMB-208ENST00000477054 SNX21Q969T3 373 aa11.64□□□□□ -0.55
GSDMB-208ENST00000477054 ZSCAN31Q96LW9 406 aaPredicted RBP11.64□□□□□ -0.55
GSDMB-208ENST00000477054 DNAAF4Q8WXU2 420 aa11.64□□□□□ -0.55
GSDMB-208ENST00000477054 SEC24BO95487 1268 aa11.63□□□□□ -0.55
GSDMB-208ENST00000477054 APPP05067 770 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 242.1 ms