RNA–Protein interactions for RNA: ENST00000476935.5

GNAS-233, Transcript of GNAS complex locus, human

TSL 3

Gene GNAS, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-233	ENST00000476935	RAPGEF4	Q8WZA2	1011 aa		32.67	■■■□□ 2.82
GNAS-233	ENST00000476935	WASHC2A	Q641Q2	1341 aa		32.67	■■■□□ 2.82
GNAS-233	ENST00000476935	SHANK3	Q9BYB0	1731 aa		32.66	■■■□□ 2.82
GNAS-233	ENST00000476935	BTAF1	O14981	1849 aa		32.66	■■■□□ 2.82
GNAS-233	ENST00000476935	PPM1G	O15355	546 aa	Predicted RBP	32.66	■■■□□ 2.82
GNAS-233	ENST00000476935	TXNRD1	Q16881	649 aa		32.66	■■■□□ 2.82
GNAS-233	ENST00000476935	POLK	Q9UBT6	870 aa		32.66	■■■□□ 2.82
GNAS-233	ENST00000476935	NSD2	O96028	1365 aa		32.64	■■■□□ 2.82
GNAS-233	ENST00000476935	TAT	P17735	454 aa	Predicted RBP	32.64	■■■□□ 2.82
GNAS-233	ENST00000476935	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.6	■■■□□ 2.81
GNAS-233	ENST00000476935	KIF7	Q2M1P5	1343 aa		32.59	■■■□□ 2.81
GNAS-233	ENST00000476935	TNNT2	P45379	298 aa	Predicted RBP	32.58	■■■□□ 2.81
GNAS-233	ENST00000476935	KNSTRN	Q9Y448	316 aa		32.58	■■■□□ 2.81
GNAS-233	ENST00000476935	NCAPD2	Q15021	1401 aa		32.58	■■■□□ 2.81
GNAS-233	ENST00000476935	DOT1L	Q8TEK3	1739 aa		32.56	■■■□□ 2.8
GNAS-233	ENST00000476935	PRIM1	P49642	420 aa	Known RBP	32.55	■■■□□ 2.8
GNAS-233	ENST00000476935	EYA1	Q99502	592 aa		32.54	■■■□□ 2.8
GNAS-233	ENST00000476935	STK32B	Q9NY57	414 aa		32.54	■■■□□ 2.8
GNAS-233	ENST00000476935	PCDH11X	Q9BZA7	1347 aa		32.53	■■■□□ 2.8
GNAS-233	ENST00000476935	PCDH11Y	Q9BZA8	1340 aa		32.53	■■■□□ 2.8
GNAS-233	ENST00000476935	MORC1	Q86VD1	984 aa		32.53	■■■□□ 2.8
GNAS-233	ENST00000476935	SYTL4	Q96C24	671 aa	Predicted RBP	32.53	■■■□□ 2.8
GNAS-233	ENST00000476935	SLC15A2	Q16348	729 aa		32.52	■■■□□ 2.8
GNAS-233	ENST00000476935	SPON1	Q9HCB6	807 aa		32.5	■■■□□ 2.79
GNAS-233	ENST00000476935	PKD1L3	Q7Z443	1732 aa		32.49	■■■□□ 2.79
GNAS-233	ENST00000476935	EIF4A2	Q14240	407 aa	Known RBP	32.49	■■■□□ 2.79
GNAS-233	ENST00000476935	CASZ1	Q86V15	1759 aa		32.49	■■■□□ 2.79
GNAS-233	ENST00000476935	SLC27A3	Q5K4L6	730 aa		32.48	■■■□□ 2.79
GNAS-233	ENST00000476935	CYP27B1	O15528	508 aa		32.47	■■■□□ 2.79
GNAS-233	ENST00000476935	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.47	■■■□□ 2.79
GNAS-233	ENST00000476935	LRRC4B	Q9NT99	713 aa		32.46	■■■□□ 2.79
GNAS-233	ENST00000476935	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.46	■■■□□ 2.79
GNAS-233	ENST00000476935	SPG7	Q9UQ90	795 aa		32.46	■■■□□ 2.79
GNAS-233	ENST00000476935	PAPPA	Q13219	1627 aa		32.45	■■■□□ 2.79
GNAS-233	ENST00000476935	LY75	O60449	1722 aa		32.44	■■■□□ 2.78
GNAS-233	ENST00000476935	PER1	O15534	1290 aa	Predicted RBP	32.42	■■■□□ 2.78
GNAS-233	ENST00000476935	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.42	■■■□□ 2.78
GNAS-233	ENST00000476935	NKX1-1	Q15270	411 aa	Predicted RBP	32.4	■■■□□ 2.78
GNAS-233	ENST00000476935	IGSF1	Q8N6C5	1336 aa		32.4	■■■□□ 2.78
GNAS-233	ENST00000476935	PLEKHG2	Q9H7P9	1386 aa		32.4	■■■□□ 2.78
GNAS-233	ENST00000476935	ITGB4	P16144	1822 aa		32.38	■■■□□ 2.77
GNAS-233	ENST00000476935	ZNF827	Q17R98	1081 aa		32.36	■■■□□ 2.77
GNAS-233	ENST00000476935	AKT1S1	Q96B36	256 aa		32.36	■■■□□ 2.77
GNAS-233	ENST00000476935	ZBTB7A	O95365	584 aa		32.35	■■■□□ 2.77
GNAS-233	ENST00000476935	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.35	■■■□□ 2.77
GNAS-233	ENST00000476935	TOGARAM1	Q9Y4F4	1720 aa		32.34	■■■□□ 2.77
GNAS-233	ENST00000476935	IFNL2	Q8IZJ0	200 aa		32.34	■■■□□ 2.77
GNAS-233	ENST00000476935	MPRIP	Q6WCQ1	1025 aa		32.33	■■■□□ 2.77
GNAS-233	ENST00000476935	QSER1	Q2KHR3	1735 aa		32.32	■■■□□ 2.76
GNAS-233	ENST00000476935	KCNQ4	P56696	695 aa		32.32	■■■□□ 2.76
GNAS-233	ENST00000476935	CCNL1	Q9UK58	526 aa	Predicted RBP	32.32	■■■□□ 2.76
GNAS-233	ENST00000476935	PHKG2	P15735	406 aa		32.31	■■■□□ 2.76
GNAS-233	ENST00000476935	MTFR1L	Q9H019	292 aa		32.31	■■■□□ 2.76
GNAS-233	ENST00000476935	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.3	■■■□□ 2.76
GNAS-233	ENST00000476935	HMGB2	P26583	209 aa	Known RBP	32.29	■■■□□ 2.76
GNAS-233	ENST00000476935	NPC1L1	Q9UHC9	1359 aa		32.29	■■■□□ 2.76
GNAS-233	ENST00000476935	PTGER2	P43116	358 aa		32.28	■■■□□ 2.76
GNAS-233	ENST00000476935	SMARCC1	Q92922	1105 aa	Predicted RBP	32.28	■■■□□ 2.76
GNAS-233	ENST00000476935	IL13	P35225	146 aa		32.27	■■■□□ 2.76
GNAS-233	ENST00000476935	MTHFS	P49914	203 aa		32.27	■■■□□ 2.76
GNAS-233	ENST00000476935	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.27	■■■□□ 2.76
GNAS-233	ENST00000476935	CC2D1B	Q5T0F9	858 aa	Known RBP	32.27	■■■□□ 2.76
GNAS-233	ENST00000476935	PIGB	Q92521	554 aa		32.27	■■■□□ 2.76
GNAS-233	ENST00000476935	PALLD	Q8WX93	1383 aa		32.26	■■■□□ 2.75
GNAS-233	ENST00000476935	AMOT	Q4VCS5	1084 aa		32.25	■■■□□ 2.75
GNAS-233	ENST00000476935	SLC16A10	Q8TF71	515 aa		32.25	■■■□□ 2.75
GNAS-233	ENST00000476935	TFCP2L1	Q9NZI6	479 aa		32.25	■■■□□ 2.75
GNAS-233	ENST00000476935	TUBGCP6	Q96RT7	1819 aa		32.24	■■■□□ 2.75
GNAS-233	ENST00000476935	AEBP1	Q8IUX7	1158 aa		32.23	■■■□□ 2.75
GNAS-233	ENST00000476935	PNPLA7	Q6ZV29	1317 aa		32.23	■■■□□ 2.75
GNAS-233	ENST00000476935	KDR	P35968	1356 aa		32.22	■■■□□ 2.75
GNAS-233	ENST00000476935	TAF1L	Q8IZX4	1826 aa		32.22	■■■□□ 2.75
GNAS-233	ENST00000476935	HSP90AB1	P08238	724 aa	Known RBP	32.22	■■■□□ 2.75
GNAS-233	ENST00000476935	SULT6B1	Q6IMI4	303 aa		32.22	■■■□□ 2.75
GNAS-233	ENST00000476935	SGIP1	Q9BQI5	828 aa		32.22	■■■□□ 2.75
GNAS-233	ENST00000476935	TMOD3	Q9NYL9	352 aa		32.22	■■■□□ 2.75
GNAS-233	ENST00000476935	C5	P01031	1676 aa		32.2	■■■□□ 2.74
GNAS-233	ENST00000476935	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.18	■■■□□ 2.74
GNAS-233	ENST00000476935	DCAF5	Q96JK2	942 aa		32.18	■■■□□ 2.74
GNAS-233	ENST00000476935	ERVV-2	B6SEH9	535 aa		32.17	■■■□□ 2.74
GNAS-233	ENST00000476935	ASAP1	Q9ULH1	1129 aa		32.14	■■■□□ 2.74
GNAS-233	ENST00000476935	COL24A1	Q17RW2	1714 aa		32.14	■■■□□ 2.74
GNAS-233	ENST00000476935	DIAPH1	O60610	1272 aa	Known RBP	32.13	■■■□□ 2.73
GNAS-233	ENST00000476935	C1orf141	Q5JVX7	400 aa		32.13	■■■□□ 2.73
GNAS-233	ENST00000476935	LOC102724428	A0A0B4J2F2	783 aa		32.12	■■■□□ 2.73
GNAS-233	ENST00000476935	SIK1	P57059	783 aa		32.12	■■■□□ 2.73
GNAS-233	ENST00000476935	ARX	Q96QS3	562 aa		32.11	■■■□□ 2.73
GNAS-233	ENST00000476935	ATG3	Q9NT62	314 aa		32.11	■■■□□ 2.73
GNAS-233	ENST00000476935	C4B	P0C0L5	1744 aa		32.1	■■■□□ 2.73
GNAS-233	ENST00000476935	CNGB1	Q14028	1251 aa	Predicted RBP	32.1	■■■□□ 2.73
GNAS-233	ENST00000476935	COL23A1	Q86Y22	540 aa	Predicted RBP	32.1	■■■□□ 2.73
GNAS-233	ENST00000476935	FLAD1	Q8NFF5	587 aa		32.1	■■■□□ 2.73
GNAS-233	ENST00000476935	KDM6A	O15550	1401 aa	Predicted RBP	32.09	■■■□□ 2.73
GNAS-233	ENST00000476935	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.09	■■■□□ 2.73
GNAS-233	ENST00000476935	DCAF8L1	A6NGE4	600 aa		32.07	■■■□□ 2.72
GNAS-233	ENST00000476935	POLD1	P28340	1107 aa		32.07	■■■□□ 2.72
GNAS-233	ENST00000476935	SYT17	Q9BSW7	474 aa		32.07	■■■□□ 2.72
GNAS-233	ENST00000476935	MSH5	O43196	834 aa		32.06	■■■□□ 2.72
GNAS-233	ENST00000476935	HMOX1	P09601	288 aa		32.06	■■■□□ 2.72
GNAS-233	ENST00000476935	CABP4	P57796	275 aa		32.06	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms