RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 FAM13BQ9NYF5 915 aa7.45□□□□□ -1.22
SPTLC3-205ENST00000476791 MPHOSPH10O00566 681 aaKnown RBP7.44□□□□□ -1.22
SPTLC3-205ENST00000476791 WDHD1O75717 1129 aaPredicted RBP7.44□□□□□ -1.22
SPTLC3-205ENST00000476791 LRCH3Q96II8 777 aa7.44□□□□□ -1.22
SPTLC3-205ENST00000476791 KLF15Q9UIH9 416 aa7.44□□□□□ -1.22
SPTLC3-205ENST00000476791 MS4A1P11836 297 aa7.44□□□□□ -1.22
SPTLC3-205ENST00000476791 EVA1CP58658 441 aa7.44□□□□□ -1.22
SPTLC3-205ENST00000476791 CCDC189A1A4V9 331 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 COQ9O75208 318 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 LIG1P18858 919 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 LMNB1P20700 586 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 GPIHBP1Q8IV16 184 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 MRRFQ96E11 262 aaKnown RBP7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 CEP126Q9P2H0 1117 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 RNF40O75150 1001 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 FECHP22830 423 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 PAX7P23759 505 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 HDGFL1Q5TGJ6 251 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 WBP1LQ9NX94 342 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 FAN1Q9Y2M0 1017 aa7.43□□□□□ -1.22
SPTLC3-205ENST00000476791 ZSCAN20P17040 1043 aaPredicted RBP7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 HIC1Q14526 733 aa7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 RPAINQ86UA6 219 aa7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 PNNQ9H307 717 aaKnown RBP7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 MAP3K20Q9NYL2 800 aaKnown RBP7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 SBNO2Q9Y2G9 1366 aa7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 FAM200BP0CF97 657 aa7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 RBM5P52756 815 aaKnown RBP eCLIP7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 SREK1Q8WXA9 508 aaKnown RBP7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 EYA1Q99502 592 aa7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 LRRC27Q9C0I9 530 aa7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 HPS5Q9UPZ3 1129 aa7.42□□□□□ -1.22
SPTLC3-205ENST00000476791 RB1CC1Q8TDY2 1594 aa7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 GPR37O15354 613 aa7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 TNNT2P45379 298 aaPredicted RBP7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 PSME1Q06323 249 aa7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 DUSP27Q5VZP5 1158 aa7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 AMOTL1Q8IY63 956 aa7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 MYCBPQ99417 103 aaPredicted RBP7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 ADGRG1Q9Y653 693 aa7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 GNPATO15228 680 aa7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 ZRANB2O95218 330 aaKnown RBP eCLIP7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 CCDC85AQ96PX6 553 aaPredicted RBP7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 PLA2G2EQ9NZK7 142 aa7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 MKRN1Q9UHC7 482 aaKnown RBP7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 FBXO9Q9UK97 447 aaPredicted RBP7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 DIS3Q9Y2L1 958 aaKnown RBP7.41□□□□□ -1.22
SPTLC3-205ENST00000476791 HDGFP51858 240 aaKnown RBP7.4□□□□□ -1.22
SPTLC3-205ENST00000476791 SKAP1Q86WV1 359 aa7.4□□□□□ -1.22
SPTLC3-205ENST00000476791 ERICH4A6NGS2 130 aa7.4□□□□□ -1.23
SPTLC3-205ENST00000476791 TGFB3P10600 412 aa7.4□□□□□ -1.23
SPTLC3-205ENST00000476791 ANP32AP39687 249 aaKnown RBP7.4□□□□□ -1.23
SPTLC3-205ENST00000476791 TERF1P54274 439 aa7.4□□□□□ -1.23
SPTLC3-205ENST00000476791 C4orf46Q504U0 113 aa7.4□□□□□ -1.23
SPTLC3-205ENST00000476791 SWT1Q5T5J6 900 aaKnown RBP7.4□□□□□ -1.23
SPTLC3-205ENST00000476791 TSR3Q9UJK0 312 aaKnown RBP7.4□□□□□ -1.23
SPTLC3-205ENST00000476791 CCDC172P0C7W6 258 aa7.39□□□□□ -1.23
SPTLC3-205ENST00000476791 U2AF1L5P0DN76 240 aaPredicted RBP7.39□□□□□ -1.23
SPTLC3-205ENST00000476791 U2AF1Q01081 240 aaKnown RBP eCLIP7.39□□□□□ -1.23
SPTLC3-205ENST00000476791 SKIV2LQ15477 1246 aaKnown RBP7.39□□□□□ -1.23
SPTLC3-205ENST00000476791 C1orf131Q8NDD1 294 aaKnown RBP7.39□□□□□ -1.23
SPTLC3-205ENST00000476791 ENOX1Q8TC92 643 aaKnown RBP7.39□□□□□ -1.23
SPTLC3-205ENST00000476791 SYNPO2Q9UMS6 1093 aa7.39□□□□□ -1.23
SPTLC3-205ENST00000476791 PES1O00541 588 aaKnown RBP7.39□□□□□ -1.23
SPTLC3-205ENST00000476791 SKILP12757 684 aa7.39□□□□□ -1.23
SPTLC3-205ENST00000476791 DCAF11Q8TEB1 546 aa7.39□□□□□ -1.23
SPTLC3-205ENST00000476791 COMMD10Q9Y6G5 202 aa7.39□□□□□ -1.23
SPTLC3-205ENST00000476791 NAP1L1P55209 391 aaKnown RBP7.38□□□□□ -1.23
SPTLC3-205ENST00000476791 RSPH1Q8WYR4 309 aa7.38□□□□□ -1.23
SPTLC3-205ENST00000476791 RANBP17Q9H2T7 1088 aaKnown RBP7.38□□□□□ -1.23
SPTLC3-205ENST00000476791 ANAPC4Q9UJX5 808 aa7.38□□□□□ -1.23
SPTLC3-205ENST00000476791 E2F5Q15329 346 aa7.38□□□□□ -1.23
SPTLC3-205ENST00000476791 POM121Q96HA1 1249 aa7.38□□□□□ -1.23
SPTLC3-205ENST00000476791 LETM1O95202 739 aaPredicted RBP7.37□□□□□ -1.23
SPTLC3-205ENST00000476791 CXorf56Q9H5V9 222 aa7.37□□□□□ -1.23
SPTLC3-205ENST00000476791 CGNQ9P2M7 1197 aaKnown RBP7.37□□□□□ -1.23
SPTLC3-205ENST00000476791 RCCD1A6NED2 376 aa7.37□□□□□ -1.23
SPTLC3-205ENST00000476791 SF3B2Q13435 895 aaKnown RBP7.37□□□□□ -1.23
SPTLC3-205ENST00000476791 ICE2Q659A1 982 aa7.37□□□□□ -1.23
SPTLC3-205ENST00000476791 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.37□□□□□ -1.23
SPTLC3-205ENST00000476791 LARGE2Q8N3Y3 721 aa7.37□□□□□ -1.23
SPTLC3-205ENST00000476791 RBM28Q9NW13 759 aaKnown RBP7.37□□□□□ -1.23
SPTLC3-205ENST00000476791 CHPF2Q9P2E5 772 aa7.37□□□□□ -1.23
SPTLC3-205ENST00000476791 TPM2P07951 284 aa7.36□□□□□ -1.23
SPTLC3-205ENST00000476791 DNAJB2P25686 324 aa7.36□□□□□ -1.23
SPTLC3-205ENST00000476791 COPB2P35606 906 aa7.36□□□□□ -1.23
SPTLC3-205ENST00000476791 DNAJC21Q5F1R6 531 aaKnown RBP7.36□□□□□ -1.23
SPTLC3-205ENST00000476791 TXNDC2Q86VQ3 553 aa7.36□□□□□ -1.23
SPTLC3-205ENST00000476791 PAIP2Q9BPZ3 127 aaKnown RBP7.36□□□□□ -1.23
SPTLC3-205ENST00000476791 ZCCHC6Q5VYS8 1495 aaKnown RBP7.36□□□□□ -1.23
SPTLC3-205ENST00000476791 DPH6Q7L8W6 267 aa7.36□□□□□ -1.23
SPTLC3-205ENST00000476791 FLT3P36888 993 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 METTL3Q86U44 580 aaKnown RBP7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 PXYLP1Q8TE99 480 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 NEUROD6Q96NK8 337 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 C22orf23Q9BZE7 217 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 WWC3Q9ULE0 1092 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 PRR12Q9ULL5 1215 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 IQSEC3Q9UPP2 1182 aaPredicted RBP7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 OATP04181 439 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms