RNA–Protein interactions for RNA: ENST00000476656.1

COL19A1-202, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 5

Gene COL19A1, Length 1,515 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-202ENST00000476656 MTHFSDQ2M296 383 aaKnown RBP17.11■□□□□ 0.33
COL19A1-202ENST00000476656 STRN4Q9NRL3 753 aa17.11■□□□□ 0.33
COL19A1-202ENST00000476656 NEFMP07197 916 aa17.1■□□□□ 0.33
COL19A1-202ENST00000476656 WWC1Q8IX03 1113 aa17.1■□□□□ 0.33
COL19A1-202ENST00000476656 NGLY1Q96IV0 654 aa17.1■□□□□ 0.33
COL19A1-202ENST00000476656 C8orf37Q96NL8 207 aa17.1■□□□□ 0.33
COL19A1-202ENST00000476656 SPATA31A1Q5TZJ5 1347 aa17.1■□□□□ 0.33
COL19A1-202ENST00000476656 SPATA31A5Q5VU36 1347 aa17.1■□□□□ 0.33
COL19A1-202ENST00000476656 SPATA31A7Q8IWB4 1347 aa17.1■□□□□ 0.33
COL19A1-202ENST00000476656 AMOTQ4VCS5 1084 aa17.09■□□□□ 0.33
COL19A1-202ENST00000476656 RRP7AQ9Y3A4 280 aaKnown RBP17.09■□□□□ 0.33
COL19A1-202ENST00000476656 SENP3-EIF4A1A0A087X0R7 540 aa17.08■□□□□ 0.32
COL19A1-202ENST00000476656 RIPK4P57078 832 aa17.08■□□□□ 0.32
COL19A1-202ENST00000476656 VPS72Q15906 364 aa17.08■□□□□ 0.32
COL19A1-202ENST00000476656 GAS2L2Q8NHY3 880 aa17.08■□□□□ 0.32
COL19A1-202ENST00000476656 RAPGEF4Q8WZA2 1011 aa17.08■□□□□ 0.32
COL19A1-202ENST00000476656 SCN11AQ9UI33 1791 aa17.08■□□□□ 0.32
COL19A1-202ENST00000476656 THRAP3Q9Y2W1 955 aaKnown RBP17.07■□□□□ 0.32
COL19A1-202ENST00000476656 IL2RBP14784 551 aa17.06■□□□□ 0.32
COL19A1-202ENST00000476656 TATP17735 454 aaPredicted RBP17.06■□□□□ 0.32
COL19A1-202ENST00000476656 PDE3BQ13370 1112 aa17.06■□□□□ 0.32
COL19A1-202ENST00000476656 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
COL19A1-202ENST00000476656 ATRNO75882 1429 aa17.06■□□□□ 0.32
COL19A1-202ENST00000476656 HTATSF1O43719 755 aaKnown RBP17.06■□□□□ 0.32
COL19A1-202ENST00000476656 SIPA1L3O60292 1781 aaPredicted RBP17.06■□□□□ 0.32
COL19A1-202ENST00000476656 GLI3P10071 1580 aa17.06■□□□□ 0.32
COL19A1-202ENST00000476656 AFF2P51816 1311 aa17.06■□□□□ 0.32
COL19A1-202ENST00000476656 BARGINQ6ZT62 677 aa17.06■□□□□ 0.32
COL19A1-202ENST00000476656 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
COL19A1-202ENST00000476656 THSD7AQ9UPZ6 1657 aa17.06■□□□□ 0.32
COL19A1-202ENST00000476656 MAP3K5Q99683 1374 aa17.05■□□□□ 0.32
COL19A1-202ENST00000476656 NEUROD2Q15784 382 aa17.05■□□□□ 0.32
COL19A1-202ENST00000476656 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
COL19A1-202ENST00000476656 USP21Q9UK80 565 aa17.05■□□□□ 0.32
COL19A1-202ENST00000476656 SALL2Q9Y467 1007 aaPredicted RBP17.05■□□□□ 0.32
COL19A1-202ENST00000476656 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
COL19A1-202ENST00000476656 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
COL19A1-202ENST00000476656 IL16Q14005 1332 aa17.03■□□□□ 0.32
COL19A1-202ENST00000476656 MEX3CQ5U5Q3 659 aaKnown RBP17.03■□□□□ 0.32
COL19A1-202ENST00000476656 CDCA7Q9BWT1 371 aaPredicted RBP17.03■□□□□ 0.32
COL19A1-202ENST00000476656 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.32
COL19A1-202ENST00000476656 AKAP4Q5JQC9 854 aa17.02■□□□□ 0.32
COL19A1-202ENST00000476656 SPG7Q9UQ90 795 aa17.02■□□□□ 0.32
COL19A1-202ENST00000476656 CYP27B1O15528 508 aa17.01■□□□□ 0.31
COL19A1-202ENST00000476656 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
COL19A1-202ENST00000476656 ZNF530Q6P9A1 599 aaPredicted RBP17.01■□□□□ 0.31
COL19A1-202ENST00000476656 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
COL19A1-202ENST00000476656 TNS2Q63HR2 1409 aa17.01■□□□□ 0.31
COL19A1-202ENST00000476656 SLFN5Q08AF3 891 aa17.01■□□□□ 0.31
COL19A1-202ENST00000476656 ZCRB1Q8TBF4 217 aaKnown RBP17.01■□□□□ 0.31
COL19A1-202ENST00000476656 CDCA7LQ96GN5 454 aa17.01■□□□□ 0.31
COL19A1-202ENST00000476656 USP35Q9P2H5 1018 aa17.01■□□□□ 0.31
COL19A1-202ENST00000476656 MRC1P22897 1456 aa17■□□□□ 0.31
COL19A1-202ENST00000476656 ZNF853P0CG23 659 aa17■□□□□ 0.31
COL19A1-202ENST00000476656 PHKG2P15735 406 aa17■□□□□ 0.31
COL19A1-202ENST00000476656 IL17REQ8NFR9 667 aa17■□□□□ 0.31
COL19A1-202ENST00000476656 KDM6AO15550 1401 aaPredicted RBP17■□□□□ 0.31
COL19A1-202ENST00000476656 PCDH11XQ9BZA7 1347 aa16.99■□□□□ 0.31
COL19A1-202ENST00000476656 PCDH11YQ9BZA8 1340 aa16.99■□□□□ 0.31
COL19A1-202ENST00000476656 ONECUT3O60422 494 aaPredicted RBP16.99■□□□□ 0.31
COL19A1-202ENST00000476656 NKX1-1Q15270 411 aaPredicted RBP16.99■□□□□ 0.31
COL19A1-202ENST00000476656 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
COL19A1-202ENST00000476656 E9PSI1 815 aa16.98■□□□□ 0.31
COL19A1-202ENST00000476656 DUSP27Q5VZP5 1158 aa16.98■□□□□ 0.31
COL19A1-202ENST00000476656 IFNL2Q8IZJ0 200 aa16.98■□□□□ 0.31
COL19A1-202ENST00000476656 TRPC5Q9UL62 973 aaPredicted RBP16.98■□□□□ 0.31
COL19A1-202ENST00000476656 KDM3BQ7LBC6 1761 aa16.98■□□□□ 0.31
COL19A1-202ENST00000476656 CALD1Q05682 793 aaKnown RBP16.97■□□□□ 0.31
COL19A1-202ENST00000476656 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
COL19A1-202ENST00000476656 MCM10Q7L590 875 aa16.97■□□□□ 0.31
COL19A1-202ENST00000476656 GJD4Q96KN9 370 aaPredicted RBP16.97■□□□□ 0.31
COL19A1-202ENST00000476656 THUMPD2Q9BTF0 503 aaKnown RBP16.97■□□□□ 0.31
COL19A1-202ENST00000476656 C1orf141Q5JVX7 400 aa16.96■□□□□ 0.31
COL19A1-202ENST00000476656 ITGB4P16144 1822 aa16.96■□□□□ 0.31
COL19A1-202ENST00000476656 RNMTO43148 476 aaKnown RBP16.96■□□□□ 0.3
COL19A1-202ENST00000476656 CFAP44Q96MT7 982 aa16.96■□□□□ 0.3
COL19A1-202ENST00000476656 LGR6Q9HBX8 967 aa16.96■□□□□ 0.3
COL19A1-202ENST00000476656 IFT57Q9NWB7 429 aa16.96■□□□□ 0.3
COL19A1-202ENST00000476656 CENPBP07199 599 aaPredicted RBP16.95■□□□□ 0.3
COL19A1-202ENST00000476656 RTF1Q92541 710 aaKnown RBP16.95■□□□□ 0.3
COL19A1-202ENST00000476656 DCAF5Q96JK2 942 aa16.95■□□□□ 0.3
COL19A1-202ENST00000476656 CHL1O00533 1208 aa16.94■□□□□ 0.3
COL19A1-202ENST00000476656 HSP90AB1P08238 724 aaKnown RBP16.94■□□□□ 0.3
COL19A1-202ENST00000476656 EXOC5O00471 708 aa16.93■□□□□ 0.3
COL19A1-202ENST00000476656 GNAI1P63096 354 aa16.93■□□□□ 0.3
COL19A1-202ENST00000476656 ZNF772Q68DY9 489 aaPredicted RBP16.93■□□□□ 0.3
COL19A1-202ENST00000476656 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
COL19A1-202ENST00000476656 QTRT2Q9H974 415 aaKnown RBP16.93■□□□□ 0.3
COL19A1-202ENST00000476656 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
COL19A1-202ENST00000476656 CCDC9Q9Y3X0 531 aaKnown RBP16.93■□□□□ 0.3
COL19A1-202ENST00000476656 BRWD3Q6RI45 1802 aa16.93■□□□□ 0.3
COL19A1-202ENST00000476656 FAM98CQ17RN3 349 aaKnown RBP16.92■□□□□ 0.3
COL19A1-202ENST00000476656 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
COL19A1-202ENST00000476656 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
COL19A1-202ENST00000476656 PAPPAQ13219 1627 aa16.92■□□□□ 0.3
COL19A1-202ENST00000476656 DDB1Q16531 1140 aa16.91■□□□□ 0.3
COL19A1-202ENST00000476656 RGS17Q9UGC6 210 aaPredicted RBP16.91■□□□□ 0.3
COL19A1-202ENST00000476656 DOT1LQ8TEK3 1739 aa16.91■□□□□ 0.3
COL19A1-202ENST00000476656 UBR2Q8IWV8 1755 aa16.9■□□□□ 0.3
COL19A1-202ENST00000476656 BCL9O00512 1426 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms