RNA–Protein interactions for RNA: ENST00000475869.2

NBPF3-208, Transcript of NBPF member 3, human

TSL 5

Gene NBPF3, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NBPF3-208	ENST00000475869	PANK3	Q9H999	370 aa		34.05	■■■■□ 3.04
NBPF3-208	ENST00000475869	DOT1L	Q8TEK3	1739 aa		34.01	■■■■□ 3.04
NBPF3-208	ENST00000475869	ZCRB1	Q8TBF4	217 aa	Known RBP	34.01	■■■■□ 3.03
NBPF3-208	ENST00000475869	TXNRD1	Q16881	649 aa		34	■■■■□ 3.03
NBPF3-208	ENST00000475869	ANO8	Q9HCE9	1232 aa	Predicted RBP	34	■■■■□ 3.03
NBPF3-208	ENST00000475869	PPM1G	O15355	546 aa	Predicted RBP	33.99	■■■■□ 3.03
NBPF3-208	ENST00000475869	RAPGEF4	Q8WZA2	1011 aa		33.98	■■■■□ 3.03
NBPF3-208	ENST00000475869	WASHC2A	Q641Q2	1341 aa		33.98	■■■■□ 3.03
NBPF3-208	ENST00000475869	POLK	Q9UBT6	870 aa		33.97	■■■■□ 3.03
NBPF3-208	ENST00000475869	NCAPD2	Q15021	1401 aa		33.96	■■■■□ 3.03
NBPF3-208	ENST00000475869	NSD2	O96028	1365 aa		33.95	■■■■□ 3.02
NBPF3-208	ENST00000475869	CASZ1	Q86V15	1759 aa		33.95	■■■■□ 3.02
NBPF3-208	ENST00000475869	TAT	P17735	454 aa	Predicted RBP	33.93	■■■■□ 3.02
NBPF3-208	ENST00000475869	TNNT2	P45379	298 aa	Predicted RBP	33.93	■■■■□ 3.02
NBPF3-208	ENST00000475869	KIF7	Q2M1P5	1343 aa		33.92	■■■■□ 3.02
NBPF3-208	ENST00000475869	PAPPA	Q13219	1627 aa		33.92	■■■■□ 3.02
NBPF3-208	ENST00000475869	PKD1L3	Q7Z443	1732 aa		33.92	■■■■□ 3.02
NBPF3-208	ENST00000475869	PRIM1	P49642	420 aa	Known RBP	33.88	■■■■□ 3.01
NBPF3-208	ENST00000475869	PCDH11X	Q9BZA7	1347 aa		33.86	■■■■□ 3.01
NBPF3-208	ENST00000475869	PCDH11Y	Q9BZA8	1340 aa		33.86	■■■■□ 3.01
NBPF3-208	ENST00000475869	SYTL4	Q96C24	671 aa	Predicted RBP	33.86	■■■■□ 3.01
NBPF3-208	ENST00000475869	STK32B	Q9NY57	414 aa		33.86	■■■■□ 3.01
NBPF3-208	ENST00000475869	LY75	O60449	1722 aa		33.85	■■■■□ 3.01
NBPF3-208	ENST00000475869	EYA1	Q99502	592 aa		33.85	■■■■□ 3.01
NBPF3-208	ENST00000475869	SLC15A2	Q16348	729 aa		33.84	■■■■□ 3.01
NBPF3-208	ENST00000475869	KNSTRN	Q9Y448	316 aa		33.84	■■■■□ 3.01
NBPF3-208	ENST00000475869	EIF4A2	Q14240	407 aa	Known RBP	33.82	■■■■□ 3
NBPF3-208	ENST00000475869	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.82	■■■■□ 3
NBPF3-208	ENST00000475869	LRRC4B	Q9NT99	713 aa		33.82	■■■■□ 3
NBPF3-208	ENST00000475869	MORC1	Q86VD1	984 aa		33.81	■■■■□ 3
NBPF3-208	ENST00000475869	SPON1	Q9HCB6	807 aa		33.81	■■■■□ 3
NBPF3-208	ENST00000475869	TOGARAM1	Q9Y4F4	1720 aa		33.81	■■■■□ 3
NBPF3-208	ENST00000475869	CYP27B1	O15528	508 aa		33.8	■■■■□ 3
NBPF3-208	ENST00000475869	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.78	■■■■□ 3
NBPF3-208	ENST00000475869	SLC27A3	Q5K4L6	730 aa		33.78	■■■■□ 3
NBPF3-208	ENST00000475869	ITGB4	P16144	1822 aa		33.77	■■■■□ 3
NBPF3-208	ENST00000475869	ZNF827	Q17R98	1081 aa		33.74	■■■□□ 2.99
NBPF3-208	ENST00000475869	SPG7	Q9UQ90	795 aa		33.74	■■■□□ 2.99
NBPF3-208	ENST00000475869	QSER1	Q2KHR3	1735 aa		33.73	■■■□□ 2.99
NBPF3-208	ENST00000475869	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.73	■■■□□ 2.99
NBPF3-208	ENST00000475869	IGSF1	Q8N6C5	1336 aa		33.73	■■■□□ 2.99
NBPF3-208	ENST00000475869	ZBTB7A	O95365	584 aa		33.71	■■■□□ 2.99
NBPF3-208	ENST00000475869	TUBGCP6	Q96RT7	1819 aa		33.7	■■■□□ 2.99
NBPF3-208	ENST00000475869	PER1	O15534	1290 aa	Predicted RBP	33.7	■■■□□ 2.99
NBPF3-208	ENST00000475869	NKX1-1	Q15270	411 aa	Predicted RBP	33.7	■■■□□ 2.99
NBPF3-208	ENST00000475869	AKT1S1	Q96B36	256 aa		33.7	■■■□□ 2.99
NBPF3-208	ENST00000475869	PLEKHG2	Q9H7P9	1386 aa		33.7	■■■□□ 2.98
NBPF3-208	ENST00000475869	KCNQ4	P56696	695 aa		33.69	■■■□□ 2.98
NBPF3-208	ENST00000475869	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.67	■■■□□ 2.98
NBPF3-208	ENST00000475869	MPRIP	Q6WCQ1	1025 aa		33.65	■■■□□ 2.98
NBPF3-208	ENST00000475869	CCNL1	Q9UK58	526 aa	Predicted RBP	33.65	■■■□□ 2.98
NBPF3-208	ENST00000475869	PTGER2	P43116	358 aa		33.64	■■■□□ 2.98
NBPF3-208	ENST00000475869	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.64	■■■□□ 2.98
NBPF3-208	ENST00000475869	PHKG2	P15735	406 aa		33.63	■■■□□ 2.97
NBPF3-208	ENST00000475869	MTFR1L	Q9H019	292 aa		33.63	■■■□□ 2.97
NBPF3-208	ENST00000475869	C5	P01031	1676 aa		33.63	■■■□□ 2.97
NBPF3-208	ENST00000475869	IFNL2	Q8IZJ0	200 aa		33.62	■■■□□ 2.97
NBPF3-208	ENST00000475869	TAF1L	Q8IZX4	1826 aa		33.62	■■■□□ 2.97
NBPF3-208	ENST00000475869	PALLD	Q8WX93	1383 aa		33.6	■■■□□ 2.97
NBPF3-208	ENST00000475869	PIGB	Q92521	554 aa		33.59	■■■□□ 2.97
NBPF3-208	ENST00000475869	IL13	P35225	146 aa		33.58	■■■□□ 2.97
NBPF3-208	ENST00000475869	CC2D1B	Q5T0F9	858 aa	Known RBP	33.58	■■■□□ 2.97
NBPF3-208	ENST00000475869	AEBP1	Q8IUX7	1158 aa		33.58	■■■□□ 2.97
NBPF3-208	ENST00000475869	PNPLA7	Q6ZV29	1317 aa		33.57	■■■□□ 2.97
NBPF3-208	ENST00000475869	SGIP1	Q9BQI5	828 aa		33.57	■■■□□ 2.96
NBPF3-208	ENST00000475869	NPC1L1	Q9UHC9	1359 aa		33.57	■■■□□ 2.96
NBPF3-208	ENST00000475869	TFCP2L1	Q9NZI6	479 aa		33.56	■■■□□ 2.96
NBPF3-208	ENST00000475869	COL24A1	Q17RW2	1714 aa		33.56	■■■□□ 2.96
NBPF3-208	ENST00000475869	MTHFS	P49914	203 aa		33.55	■■■□□ 2.96
NBPF3-208	ENST00000475869	SMARCC1	Q92922	1105 aa	Predicted RBP	33.55	■■■□□ 2.96
NBPF3-208	ENST00000475869	KDR	P35968	1356 aa		33.55	■■■□□ 2.96
NBPF3-208	ENST00000475869	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.53	■■■□□ 2.96
NBPF3-208	ENST00000475869	TMOD3	Q9NYL9	352 aa		33.53	■■■□□ 2.96
NBPF3-208	ENST00000475869	SULT6B1	Q6IMI4	303 aa		33.52	■■■□□ 2.96
NBPF3-208	ENST00000475869	AMOT	Q4VCS5	1084 aa		33.51	■■■□□ 2.95
NBPF3-208	ENST00000475869	SLC16A10	Q8TF71	515 aa		33.51	■■■□□ 2.95
NBPF3-208	ENST00000475869	C4B	P0C0L5	1744 aa		33.5	■■■□□ 2.95
NBPF3-208	ENST00000475869	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.49	■■■□□ 2.95
NBPF3-208	ENST00000475869	HSP90AB1	P08238	724 aa	Known RBP	33.47	■■■□□ 2.95
NBPF3-208	ENST00000475869	KDM6A	O15550	1401 aa	Predicted RBP	33.46	■■■□□ 2.95
NBPF3-208	ENST00000475869	HMGB2	P26583	209 aa	Known RBP	33.46	■■■□□ 2.95
NBPF3-208	ENST00000475869	DCAF5	Q96JK2	942 aa		33.46	■■■□□ 2.95
NBPF3-208	ENST00000475869	ASAP1	Q9ULH1	1129 aa		33.46	■■■□□ 2.95
NBPF3-208	ENST00000475869	ERVV-2	B6SEH9	535 aa		33.44	■■■□□ 2.94
NBPF3-208	ENST00000475869	ARX	Q96QS3	562 aa		33.44	■■■□□ 2.94
NBPF3-208	ENST00000475869	LOC102724428	A0A0B4J2F2	783 aa		33.43	■■■□□ 2.94
NBPF3-208	ENST00000475869	SIK1	P57059	783 aa		33.43	■■■□□ 2.94
NBPF3-208	ENST00000475869	CNGB1	Q14028	1251 aa	Predicted RBP	33.43	■■■□□ 2.94
NBPF3-208	ENST00000475869	COL23A1	Q86Y22	540 aa	Predicted RBP	33.43	■■■□□ 2.94
NBPF3-208	ENST00000475869	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.43	■■■□□ 2.94
NBPF3-208	ENST00000475869	COL3A1	P02461	1466 aa	Predicted RBP	33.43	■■■□□ 2.94
NBPF3-208	ENST00000475869	UBR3	Q6ZT12	1888 aa		33.42	■■■□□ 2.94
NBPF3-208	ENST00000475869	ATG3	Q9NT62	314 aa		33.42	■■■□□ 2.94
NBPF3-208	ENST00000475869	SCN11A	Q9UI33	1791 aa		33.41	■■■□□ 2.94
NBPF3-208	ENST00000475869	DIAPH1	O60610	1272 aa	Known RBP	33.4	■■■□□ 2.94
NBPF3-208	ENST00000475869	C1orf141	Q5JVX7	400 aa		33.4	■■■□□ 2.94
NBPF3-208	ENST00000475869	SYT17	Q9BSW7	474 aa		33.39	■■■□□ 2.94
NBPF3-208	ENST00000475869	ZNF831	Q5JPB2	1677 aa		33.39	■■■□□ 2.94
NBPF3-208	ENST00000475869	MAP3K5	Q99683	1374 aa		33.37	■■■□□ 2.93
NBPF3-208	ENST00000475869	MSH5	O43196	834 aa		33.37	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms