RNA–Protein interactions for RNA: ENST00000475727.1

LHX9-205, Transcript of LIM homeobox 9, humanhuman

TSL 1 (best)

Gene LHX9, Length 259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-205ENST00000475727 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.12
LHX9-205ENST00000475727 RUNDC1Q96C34 613 aa14.33□□□□□ -0.12
LHX9-205ENST00000475727 SPG7Q9UQ90 795 aa14.33□□□□□ -0.12
LHX9-205ENST00000475727 EXOC5O00471 708 aa14.32□□□□□ -0.12
LHX9-205ENST00000475727 ZCRB1Q8TBF4 217 aaKnown RBP14.32□□□□□ -0.12
LHX9-205ENST00000475727 PLEKHG2Q9H7P9 1386 aa14.32□□□□□ -0.12
LHX9-205ENST00000475727 PARP4Q9UKK3 1724 aaKnown RBP14.32□□□□□ -0.12
LHX9-205ENST00000475727 DDB1Q16531 1140 aa14.31□□□□□ -0.12
LHX9-205ENST00000475727 GAS2L2Q8NHY3 880 aa14.31□□□□□ -0.12
LHX9-205ENST00000475727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.31□□□□□ -0.12
LHX9-205ENST00000475727 RGS17Q9UGC6 210 aaPredicted RBP14.31□□□□□ -0.12
LHX9-205ENST00000475727 MEGF6O75095 1541 aa14.31□□□□□ -0.12
LHX9-205ENST00000475727 GLI3P10071 1580 aa14.3□□□□□ -0.12
LHX9-205ENST00000475727 C1orf141Q5JVX7 400 aa14.3□□□□□ -0.12
LHX9-205ENST00000475727 POTEAQ6S8J7 498 aa14.3□□□□□ -0.12
LHX9-205ENST00000475727 OVOS2A0A0G2JMS6 1433 aa14.3□□□□□ -0.12
LHX9-205ENST00000475727 DISP2A7MBM2 1401 aa14.3□□□□□ -0.12
LHX9-205ENST00000475727 WNK3Q9BYP7 1800 aa14.29□□□□□ -0.12
LHX9-205ENST00000475727 PDE3BQ13370 1112 aa14.29□□□□□ -0.12
LHX9-205ENST00000475727 ZNF530Q6P9A1 599 aaPredicted RBP14.29□□□□□ -0.12
LHX9-205ENST00000475727 SEPT12Q8IYM1 358 aa14.29□□□□□ -0.12
LHX9-205ENST00000475727 PLEKHF1Q96S99 279 aa14.29□□□□□ -0.12
LHX9-205ENST00000475727 PCDH11XQ9BZA7 1347 aa14.29□□□□□ -0.12
LHX9-205ENST00000475727 PCDH11YQ9BZA8 1340 aa14.29□□□□□ -0.12
LHX9-205ENST00000475727 ONECUT3O60422 494 aaPredicted RBP14.28□□□□□ -0.12
LHX9-205ENST00000475727 PHACTR3Q96KR7 559 aa14.28□□□□□ -0.12
LHX9-205ENST00000475727 APAF1O14727 1248 aa14.27□□□□□ -0.13
LHX9-205ENST00000475727 NFE2L2Q16236 605 aa14.27□□□□□ -0.13
LHX9-205ENST00000475727 MTHFSDQ2M296 383 aaKnown RBP14.27□□□□□ -0.13
LHX9-205ENST00000475727 IFNL2Q8IZJ0 200 aa14.27□□□□□ -0.13
LHX9-205ENST00000475727 DDX54Q8TDD1 881 aaKnown RBP14.27□□□□□ -0.13
LHX9-205ENST00000475727 TNS2Q63HR2 1409 aa14.26□□□□□ -0.13
LHX9-205ENST00000475727 HSP90AB1P08238 724 aaKnown RBP14.26□□□□□ -0.13
LHX9-205ENST00000475727 LMOD3Q0VAK6 560 aa14.26□□□□□ -0.13
LHX9-205ENST00000475727 NEUROD2Q15784 382 aa14.26□□□□□ -0.13
LHX9-205ENST00000475727 AKAP4Q5JQC9 854 aa14.26□□□□□ -0.13
LHX9-205ENST00000475727 RTF1Q92541 710 aaKnown RBP14.26□□□□□ -0.13
LHX9-205ENST00000475727 PKD1L3Q7Z443 1732 aa14.25□□□□□ -0.13
LHX9-205ENST00000475727 TMPOP42166 694 aaKnown RBP14.25□□□□□ -0.13
LHX9-205ENST00000475727 RIPK4P57078 832 aa14.25□□□□□ -0.13
LHX9-205ENST00000475727 THSD7AQ9UPZ6 1657 aa14.25□□□□□ -0.13
LHX9-205ENST00000475727 GNAT3A8MTJ3 354 aa14.24□□□□□ -0.13
LHX9-205ENST00000475727 PHKG2P15735 406 aa14.24□□□□□ -0.13
LHX9-205ENST00000475727 NGEFQ8N5V2 710 aa14.24□□□□□ -0.13
LHX9-205ENST00000475727 RRP7AQ9Y3A4 280 aaKnown RBP14.24□□□□□ -0.13
LHX9-205ENST00000475727 MAP3K5Q99683 1374 aa14.23□□□□□ -0.13
LHX9-205ENST00000475727 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
LHX9-205ENST00000475727 CYP27B1O15528 508 aa14.23□□□□□ -0.13
LHX9-205ENST00000475727 KRT27Q7Z3Y8 459 aa14.23□□□□□ -0.13
LHX9-205ENST00000475727 KAT6BQ8WYB5 2073 aa14.22□□□□□ -0.13
LHX9-205ENST00000475727 HTATSF1O43719 755 aaKnown RBP14.22□□□□□ -0.13
LHX9-205ENST00000475727 HNRNPUQ00839 825 aaKnown RBP eCLIP14.22□□□□□ -0.13
LHX9-205ENST00000475727 SALL2Q9Y467 1007 aaPredicted RBP14.22□□□□□ -0.13
LHX9-205ENST00000475727 SENP3-EIF4A1A0A087X0R7 540 aa14.21□□□□□ -0.13
LHX9-205ENST00000475727 MARCH10Q8NA82 808 aaPredicted RBP14.21□□□□□ -0.13
LHX9-205ENST00000475727 DCAF5Q96JK2 942 aa14.21□□□□□ -0.13
LHX9-205ENST00000475727 RGS12O14924 1447 aa14.21□□□□□ -0.13
LHX9-205ENST00000475727 DLG5Q8TDM6 1919 aa14.2□□□□□ -0.14
LHX9-205ENST00000475727 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
LHX9-205ENST00000475727 MPRIPQ6WCQ1 1025 aa14.2□□□□□ -0.14
LHX9-205ENST00000475727 SHANK3Q9BYB0 1731 aa14.19□□□□□ -0.14
LHX9-205ENST00000475727 RNMTO43148 476 aaKnown RBP14.19□□□□□ -0.14
LHX9-205ENST00000475727 NKX1-1Q15270 411 aaPredicted RBP14.19□□□□□ -0.14
LHX9-205ENST00000475727 BRWD3Q6RI45 1802 aa14.18□□□□□ -0.14
LHX9-205ENST00000475727 CALD1Q05682 793 aaKnown RBP14.18□□□□□ -0.14
LHX9-205ENST00000475727 TEFQ10587 303 aa14.18□□□□□ -0.14
LHX9-205ENST00000475727 CCDC27Q2M243 656 aa14.18□□□□□ -0.14
LHX9-205ENST00000475727 FAM196AQ6ZSG2 479 aa14.18□□□□□ -0.14
LHX9-205ENST00000475727 MCM10Q7L590 875 aa14.18□□□□□ -0.14
LHX9-205ENST00000475727 YTHDC1Q96MU7 727 aaKnown RBP14.18□□□□□ -0.14
LHX9-205ENST00000475727 CABP4P57796 275 aa14.17□□□□□ -0.14
LHX9-205ENST00000475727 DCTN1Q14203 1278 aa14.17□□□□□ -0.14
LHX9-205ENST00000475727 ERVV-2B6SEH9 535 aa14.16□□□□□ -0.14
LHX9-205ENST00000475727 FAM182BQ5T319 152 aa14.16□□□□□ -0.14
LHX9-205ENST00000475727 IL17REQ8NFR9 667 aa14.16□□□□□ -0.14
LHX9-205ENST00000475727 SYTL4Q96C24 671 aaPredicted RBP14.16□□□□□ -0.14
LHX9-205ENST00000475727 LGR6Q9HBX8 967 aa14.16□□□□□ -0.14
LHX9-205ENST00000475727 TRIM35Q9UPQ4 493 aa14.16□□□□□ -0.14
LHX9-205ENST00000475727 WWC1Q8IX03 1113 aa14.15□□□□□ -0.14
LHX9-205ENST00000475727 ACSBG1Q96GR2 724 aa14.15□□□□□ -0.14
LHX9-205ENST00000475727 TMOD3Q9NYL9 352 aa14.15□□□□□ -0.14
LHX9-205ENST00000475727 KDM6AO15550 1401 aaPredicted RBP14.15□□□□□ -0.14
LHX9-205ENST00000475727 SCN11AQ9UI33 1791 aa14.14□□□□□ -0.15
LHX9-205ENST00000475727 VIRMAQ69YN4 1812 aaKnown RBP14.14□□□□□ -0.15
LHX9-205ENST00000475727 WDR63Q8IWG1 891 aa14.14□□□□□ -0.15
LHX9-205ENST00000475727 THUMPD2Q9BTF0 503 aaKnown RBP14.14□□□□□ -0.15
LHX9-205ENST00000475727 SLC52A2Q9HAB3 445 aa14.14□□□□□ -0.15
LHX9-205ENST00000475727 CEMIPQ8WUJ3 1361 aa14.13□□□□□ -0.15
LHX9-205ENST00000475727 PRIM1P49642 420 aaKnown RBP14.13□□□□□ -0.15
LHX9-205ENST00000475727 TAF7Q15545 349 aaPredicted RBP14.13□□□□□ -0.15
LHX9-205ENST00000475727 LAS1LQ9Y4W2 734 aaKnown RBP14.13□□□□□ -0.15
LHX9-205ENST00000475727 BCL9O00512 1426 aa14.13□□□□□ -0.15
LHX9-205ENST00000475727 GNAI1P63096 354 aa14.12□□□□□ -0.15
LHX9-205ENST00000475727 NFATC2IPQ8NCF5 419 aa14.12□□□□□ -0.15
LHX9-205ENST00000475727 DOT1LQ8TEK3 1739 aa14.12□□□□□ -0.15
LHX9-205ENST00000475727 ZBED9Q6R2W3 1325 aa14.12□□□□□ -0.15
LHX9-205ENST00000475727 BTBD11A6QL63 1104 aa14.11□□□□□ -0.15
LHX9-205ENST00000475727 GOLGA2Q08379 1002 aa14.11□□□□□ -0.15
LHX9-205ENST00000475727 IL16Q14005 1332 aa14.11□□□□□ -0.15
LHX9-205ENST00000475727 ADAMTS7Q9UKP4 1686 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms