RNA–Protein interactions for RNA: ENST00000475548.5

SMTN-216, Transcript of smoothelin, humanhuman

TSL 4

Gene SMTN, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-216ENST00000475548 ZCRB1Q8TBF4 217 aaKnown RBP23.77■■□□□ 1.4
SMTN-216ENST00000475548 TNS2Q63HR2 1409 aa23.76■■□□□ 1.39
SMTN-216ENST00000475548 HMOX1P09601 288 aa23.76■■□□□ 1.39
SMTN-216ENST00000475548 PLEKHG2Q9H7P9 1386 aa23.76■■□□□ 1.39
SMTN-216ENST00000475548 U2AF1L5P0DN76 240 aaPredicted RBP23.75■■□□□ 1.39
SMTN-216ENST00000475548 U2AF1Q01081 240 aaKnown RBP eCLIP23.75■■□□□ 1.39
SMTN-216ENST00000475548 DIEXFQ68CQ4 756 aaKnown RBP23.75■■□□□ 1.39
SMTN-216ENST00000475548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.74■■□□□ 1.39
SMTN-216ENST00000475548 SPG7Q9UQ90 795 aa23.74■■□□□ 1.39
SMTN-216ENST00000475548 MARCH10Q8NA82 808 aaPredicted RBP23.72■■□□□ 1.39
SMTN-216ENST00000475548 FCHSD2O94868 740 aa23.71■■□□□ 1.39
SMTN-216ENST00000475548 AMOTQ4VCS5 1084 aa23.71■■□□□ 1.39
SMTN-216ENST00000475548 PLEKHO1Q53GL0 409 aaPredicted RBP23.71■■□□□ 1.39
SMTN-216ENST00000475548 DDX54Q8TDD1 881 aaKnown RBP23.71■■□□□ 1.39
SMTN-216ENST00000475548 PCDH11XQ9BZA7 1347 aa23.7■■□□□ 1.38
SMTN-216ENST00000475548 PCDH11YQ9BZA8 1340 aa23.7■■□□□ 1.38
SMTN-216ENST00000475548 FAM182BQ5T319 152 aa23.7■■□□□ 1.38
SMTN-216ENST00000475548 FAM196AQ6ZSG2 479 aa23.7■■□□□ 1.38
SMTN-216ENST00000475548 PKD1L3Q7Z443 1732 aa23.7■■□□□ 1.38
SMTN-216ENST00000475548 SHANK3Q9BYB0 1731 aa23.68■■□□□ 1.38
SMTN-216ENST00000475548 RSPH6AQ9H0K4 717 aa23.68■■□□□ 1.38
SMTN-216ENST00000475548 WDR43Q15061 677 aaKnown RBP eCLIP23.67■■□□□ 1.38
SMTN-216ENST00000475548 PNNQ9H307 717 aaKnown RBP23.67■■□□□ 1.38
SMTN-216ENST00000475548 PRKAR2BP31323 418 aa23.66■■□□□ 1.38
SMTN-216ENST00000475548 CCDC184Q52MB2 194 aa23.65■■□□□ 1.38
SMTN-216ENST00000475548 IFNL2Q8IZJ0 200 aa23.65■■□□□ 1.38
SMTN-216ENST00000475548 MRS2Q9HD23 443 aa23.65■■□□□ 1.38
SMTN-216ENST00000475548 BCL9O00512 1426 aa23.65■■□□□ 1.38
SMTN-216ENST00000475548 CYP27B1O15528 508 aa23.64■■□□□ 1.37
SMTN-216ENST00000475548 NEFMP07197 916 aa23.63■■□□□ 1.37
SMTN-216ENST00000475548 PHKG2P15735 406 aa23.62■■□□□ 1.37
SMTN-216ENST00000475548 ZNF530Q6P9A1 599 aaPredicted RBP23.62■■□□□ 1.37
SMTN-216ENST00000475548 MTHFSDQ2M296 383 aaKnown RBP23.61■■□□□ 1.37
SMTN-216ENST00000475548 C1orf141Q5JVX7 400 aa23.61■■□□□ 1.37
SMTN-216ENST00000475548 HSP90AB1P08238 724 aaKnown RBP23.6■■□□□ 1.37
SMTN-216ENST00000475548 NKX1-1Q15270 411 aaPredicted RBP23.6■■□□□ 1.37
SMTN-216ENST00000475548 GAS2L2Q8NHY3 880 aa23.6■■□□□ 1.37
SMTN-216ENST00000475548 ADAMTS8Q9UP79 889 aa23.6■■□□□ 1.37
SMTN-216ENST00000475548 CCDC125Q86Z20 511 aa23.59■■□□□ 1.37
SMTN-216ENST00000475548 PHACTR3Q96KR7 559 aa23.59■■□□□ 1.37
SMTN-216ENST00000475548 PLEKHF1Q96S99 279 aa23.59■■□□□ 1.37
SMTN-216ENST00000475548 SBF2Q86WG5 1849 aa23.59■■□□□ 1.37
SMTN-216ENST00000475548 AKAP4Q5JQC9 854 aa23.58■■□□□ 1.37
SMTN-216ENST00000475548 PNISRQ8TF01 805 aaKnown RBP23.58■■□□□ 1.37
SMTN-216ENST00000475548 UPF1Q92900 1129 aaKnown RBP eCLIP23.58■■□□□ 1.37
SMTN-216ENST00000475548 KAT6BQ8WYB5 2073 aa23.58■■□□□ 1.36
SMTN-216ENST00000475548 CCER2I3L3R5 266 aa23.57■■□□□ 1.36
SMTN-216ENST00000475548 TRIM37O94972 964 aa23.57■■□□□ 1.36
SMTN-216ENST00000475548 MAPK8IP3Q9UPT6 1336 aa23.57■■□□□ 1.36
SMTN-216ENST00000475548 EP400Q96L91 3159 aa23.56■■□□□ 1.36
SMTN-216ENST00000475548 SF3B2Q13435 895 aaKnown RBP23.55■■□□□ 1.36
SMTN-216ENST00000475548 ACSBG1Q96GR2 724 aa23.55■■□□□ 1.36
SMTN-216ENST00000475548 DCAF5Q96JK2 942 aa23.55■■□□□ 1.36
SMTN-216ENST00000475548 BCL11BQ9C0K0 894 aaPredicted RBP23.55■■□□□ 1.36
SMTN-216ENST00000475548 MIER1Q8N108 512 aa23.53■■□□□ 1.36
SMTN-216ENST00000475548 RUNDC1Q96C34 613 aa23.53■■□□□ 1.36
SMTN-216ENST00000475548 NHSQ6T4R5 1651 aa23.52■■□□□ 1.36
SMTN-216ENST00000475548 GNAT3A8MTJ3 354 aa23.52■■□□□ 1.36
SMTN-216ENST00000475548 KCNQ2O43526 872 aa23.52■■□□□ 1.36
SMTN-216ENST00000475548 PRIM1P49642 420 aaKnown RBP23.52■■□□□ 1.36
SMTN-216ENST00000475548 DOT1LQ8TEK3 1739 aa23.52■■□□□ 1.36
SMTN-216ENST00000475548 MPRIPQ6WCQ1 1025 aa23.51■■□□□ 1.35
SMTN-216ENST00000475548 CCDC146Q8IYE0 955 aa23.51■■□□□ 1.35
SMTN-216ENST00000475548 SYTL4Q96C24 671 aaPredicted RBP23.51■■□□□ 1.35
SMTN-216ENST00000475548 ERVV-2B6SEH9 535 aa23.5■■□□□ 1.35
SMTN-216ENST00000475548 MAP3K5Q99683 1374 aa23.5■■□□□ 1.35
SMTN-216ENST00000475548 NFE2L2Q16236 605 aa23.49■■□□□ 1.35
SMTN-216ENST00000475548 TNS1Q9HBL0 1735 aaKnown RBP23.48■■□□□ 1.35
SMTN-216ENST00000475548 APBA3O96018 575 aa23.48■■□□□ 1.35
SMTN-216ENST00000475548 PTF1AQ7RTS3 328 aa23.48■■□□□ 1.35
SMTN-216ENST00000475548 KDM6AO15550 1401 aaPredicted RBP23.48■■□□□ 1.35
SMTN-216ENST00000475548 TOGARAM1Q9Y4F4 1720 aa23.47■■□□□ 1.35
SMTN-216ENST00000475548 SCN11AQ9UI33 1791 aa23.47■■□□□ 1.35
SMTN-216ENST00000475548 ITGB4P16144 1822 aa23.47■■□□□ 1.35
SMTN-216ENST00000475548 RNMTO43148 476 aaKnown RBP23.47■■□□□ 1.35
SMTN-216ENST00000475548 HTATSF1O43719 755 aaKnown RBP23.47■■□□□ 1.35
SMTN-216ENST00000475548 BAG6P46379 1132 aa23.47■■□□□ 1.35
SMTN-216ENST00000475548 FAM9BQ8IZU0 186 aa23.47■■□□□ 1.35
SMTN-216ENST00000475548 RTF1Q92541 710 aaKnown RBP23.47■■□□□ 1.35
SMTN-216ENST00000475548 VIRMAQ69YN4 1812 aaKnown RBP23.46■■□□□ 1.35
SMTN-216ENST00000475548 LGR6Q9HBX8 967 aa23.46■■□□□ 1.35
SMTN-216ENST00000475548 TMOD3Q9NYL9 352 aa23.46■■□□□ 1.35
SMTN-216ENST00000475548 TMPOP42166 694 aaKnown RBP23.45■■□□□ 1.34
SMTN-216ENST00000475548 CABP4P57796 275 aa23.45■■□□□ 1.34
SMTN-216ENST00000475548 DLG5Q8TDM6 1919 aa23.45■■□□□ 1.34
SMTN-216ENST00000475548 IL17REQ8NFR9 667 aa23.44■■□□□ 1.34
SMTN-216ENST00000475548 BTAF1O14981 1849 aa23.44■■□□□ 1.34
SMTN-216ENST00000475548 ADAMTS7Q9UKP4 1686 aa23.44■■□□□ 1.34
SMTN-216ENST00000475548 PLSCR1O15162 318 aa23.43■■□□□ 1.34
SMTN-216ENST00000475548 RIPK4P57078 832 aa23.43■■□□□ 1.34
SMTN-216ENST00000475548 PIGBQ92521 554 aa23.43■■□□□ 1.34
SMTN-216ENST00000475548 NFATC2IPQ8NCF5 419 aa23.42■■□□□ 1.34
SMTN-216ENST00000475548 APAF1O14727 1248 aa23.41■■□□□ 1.34
SMTN-216ENST00000475548 LMOD3Q0VAK6 560 aa23.41■■□□□ 1.34
SMTN-216ENST00000475548 DEFB132Q7Z7B7 95 aa23.41■■□□□ 1.34
SMTN-216ENST00000475548 SLC52A2Q9HAB3 445 aa23.41■■□□□ 1.34
SMTN-216ENST00000475548 EN1Q05925 392 aaPredicted RBP23.4■■□□□ 1.34
SMTN-216ENST00000475548 TEFQ10587 303 aa23.4■■□□□ 1.34
SMTN-216ENST00000475548 NEUROD2Q15784 382 aa23.4■■□□□ 1.34
SMTN-216ENST00000475548 RRP7AQ9Y3A4 280 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms