RNA–Protein interactions for RNA: ENST00000475542.1

SEC23IP-206, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 552 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-206ENST00000475542 CHIC2Q9UKJ5 165 aa8.47□□□□□ -1.05
SEC23IP-206ENST00000475542 TBC1D9Q6ZT07 1266 aa8.46□□□□□ -1.06
SEC23IP-206ENST00000475542 DEPDC4Q8N2C3 294 aa8.46□□□□□ -1.06
SEC23IP-206ENST00000475542 TRIM47Q96LD4 638 aa8.46□□□□□ -1.06
SEC23IP-206ENST00000475542 OSBPL3Q9H4L5 887 aa8.46□□□□□ -1.06
SEC23IP-206ENST00000475542 SOBPA7XYQ1 873 aa8.45□□□□□ -1.06
SEC23IP-206ENST00000475542 ATP5J2-PTCD1G3V325 749 aa8.45□□□□□ -1.06
SEC23IP-206ENST00000475542 MYCP01106 439 aaPredicted RBP8.45□□□□□ -1.06
SEC23IP-206ENST00000475542 USP4Q13107 963 aa8.45□□□□□ -1.06
SEC23IP-206ENST00000475542 MAP7D1Q3KQU3 841 aa8.45□□□□□ -1.06
SEC23IP-206ENST00000475542 INSM2Q96T92 566 aaPredicted RBP8.45□□□□□ -1.06
SEC23IP-206ENST00000475542 PTGIRP43119 386 aa8.44□□□□□ -1.06
SEC23IP-206ENST00000475542 TRIM52Q96A61 297 aa8.44□□□□□ -1.06
SEC23IP-206ENST00000475542 KIFC2Q96AC6 838 aa8.44□□□□□ -1.06
SEC23IP-206ENST00000475542 FIGNL2A6NMB9 653 aa8.43□□□□□ -1.06
SEC23IP-206ENST00000475542 SPINT1O43278 529 aa8.43□□□□□ -1.06
SEC23IP-206ENST00000475542 STAU1O95793 577 aaKnown RBP8.43□□□□□ -1.06
SEC23IP-206ENST00000475542 RAB6BQ9NRW1 208 aa8.43□□□□□ -1.06
SEC23IP-206ENST00000475542 TFIP11Q9UBB9 837 aaKnown RBP8.43□□□□□ -1.06
SEC23IP-206ENST00000475542 A0A1W2PRU2 124 aa8.42□□□□□ -1.06
SEC23IP-206ENST00000475542 ARID3CA6NKF2 412 aa8.42□□□□□ -1.06
SEC23IP-206ENST00000475542 USP17L5A8MUK1 530 aa8.42□□□□□ -1.06
SEC23IP-206ENST00000475542 MEN1O00255 615 aa8.42□□□□□ -1.06
SEC23IP-206ENST00000475542 CTSOP43234 321 aaPredicted RBP8.42□□□□□ -1.06
SEC23IP-206ENST00000475542 NCOA4Q13772 614 aa8.42□□□□□ -1.06
SEC23IP-206ENST00000475542 CYP2U1Q7Z449 544 aa8.42□□□□□ -1.06
SEC23IP-206ENST00000475542 NFATC2IPQ8NCF5 419 aa8.42□□□□□ -1.06
SEC23IP-206ENST00000475542 ARHGEF10LQ9HCE6 1279 aa8.42□□□□□ -1.06
SEC23IP-206ENST00000475542 POLMQ9NP87 494 aaPredicted RBP8.42□□□□□ -1.06
SEC23IP-206ENST00000475542 SOS2Q07890 1332 aaPredicted RBP8.41□□□□□ -1.06
SEC23IP-206ENST00000475542 TTLL8A6PVC2 850 aa8.41□□□□□ -1.06
SEC23IP-206ENST00000475542 ATP9BO43861 1147 aa8.41□□□□□ -1.06
SEC23IP-206ENST00000475542 EML3Q32P44 896 aa8.41□□□□□ -1.06
SEC23IP-206ENST00000475542 PALM3A6NDB9 673 aaPredicted RBP8.4□□□□□ -1.06
SEC23IP-206ENST00000475542 MAN1A2O60476 641 aa8.4□□□□□ -1.06
SEC23IP-206ENST00000475542 SIRT1Q96EB6 747 aa8.4□□□□□ -1.06
SEC23IP-206ENST00000475542 DNMT3LQ9UJW3 386 aa8.4□□□□□ -1.06
SEC23IP-206ENST00000475542 USP17L3A6NCW0 530 aa8.39□□□□□ -1.07
SEC23IP-206ENST00000475542 USP17L4A6NCW7 530 aa8.39□□□□□ -1.07
SEC23IP-206ENST00000475542 USP17L2Q6R6M4 530 aa8.39□□□□□ -1.07
SEC23IP-206ENST00000475542 USP17L1Q7RTZ2 530 aa8.39□□□□□ -1.07
SEC23IP-206ENST00000475542 PPP1R12CQ9BZL4 782 aa8.39□□□□□ -1.07
SEC23IP-206ENST00000475542 GNRH1P01148 92 aa8.38□□□□□ -1.07
SEC23IP-206ENST00000475542 NLRP3Q96P20 1036 aa8.38□□□□□ -1.07
SEC23IP-206ENST00000475542 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
SEC23IP-206ENST00000475542 NOD1Q9Y239 953 aa8.38□□□□□ -1.07
SEC23IP-206ENST00000475542 LMOD1P29536 600 aaPredicted RBP8.37□□□□□ -1.07
SEC23IP-206ENST00000475542 FOXD4L5Q5VV16 416 aaPredicted RBP8.37□□□□□ -1.07
SEC23IP-206ENST00000475542 PCDHGA11Q9Y5H2 935 aa8.37□□□□□ -1.07
SEC23IP-206ENST00000475542 MAFBQ9Y5Q3 323 aaPredicted RBP8.37□□□□□ -1.07
SEC23IP-206ENST00000475542 LZTS3O60299 673 aaPredicted RBP8.36□□□□□ -1.07
SEC23IP-206ENST00000475542 IL2RAP01589 272 aa8.36□□□□□ -1.07
SEC23IP-206ENST00000475542 GTF2IP78347 998 aa8.36□□□□□ -1.07
SEC23IP-206ENST00000475542 CLN3Q13286 438 aa8.36□□□□□ -1.07
SEC23IP-206ENST00000475542 PLEKHM2Q8IWE5 1019 aa8.36□□□□□ -1.07
SEC23IP-206ENST00000475542 RNF217Q8TC41 542 aa8.36□□□□□ -1.07
SEC23IP-206ENST00000475542 CNKSR1Q969H4 720 aa8.36□□□□□ -1.07
SEC23IP-206ENST00000475542 MKRN1Q9UHC7 482 aaKnown RBP8.36□□□□□ -1.07
SEC23IP-206ENST00000475542 RFX1P22670 979 aa8.35□□□□□ -1.07
SEC23IP-206ENST00000475542 PRICKLE2Q7Z3G6 844 aa8.35□□□□□ -1.07
SEC23IP-206ENST00000475542 ETNK1Q9HBU6 452 aa8.35□□□□□ -1.07
SEC23IP-206ENST00000475542 RNF144AP50876 292 aaPredicted RBP8.34□□□□□ -1.07
SEC23IP-206ENST00000475542 SCNN1DP51172 638 aa8.34□□□□□ -1.07
SEC23IP-206ENST00000475542 GDF10P55107 478 aa8.34□□□□□ -1.07
SEC23IP-206ENST00000475542 CENPCQ03188 943 aa8.34□□□□□ -1.07
SEC23IP-206ENST00000475542 PSME1Q06323 249 aa8.34□□□□□ -1.07
SEC23IP-206ENST00000475542 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.34□□□□□ -1.07
SEC23IP-206ENST00000475542 ZNF775Q96BV0 537 aaPredicted RBP8.34□□□□□ -1.07
SEC23IP-206ENST00000475542 ESYT1Q9BSJ8 1104 aa8.34□□□□□ -1.07
SEC23IP-206ENST00000475542 CLDN10P78369 228 aa8.33□□□□□ -1.08
SEC23IP-206ENST00000475542 CDCA8Q53HL2 280 aa8.33□□□□□ -1.08
SEC23IP-206ENST00000475542 SLC27A3Q5K4L6 730 aa8.33□□□□□ -1.08
SEC23IP-206ENST00000475542 CFAP70Q5T0N1 1121 aa8.33□□□□□ -1.08
SEC23IP-206ENST00000475542 XAGE2Q96GT9 111 aa8.33□□□□□ -1.08
SEC23IP-206ENST00000475542 SERTAD1Q9UHV2 236 aa8.33□□□□□ -1.08
SEC23IP-206ENST00000475542 TMEM229AB2RXF0 380 aa8.32□□□□□ -1.08
SEC23IP-206ENST00000475542 RHOQP17081 205 aa8.32□□□□□ -1.08
SEC23IP-206ENST00000475542 VEGFBP49765 207 aa8.32□□□□□ -1.08
SEC23IP-206ENST00000475542 ESCO1Q5FWF5 840 aa8.32□□□□□ -1.08
SEC23IP-206ENST00000475542 LYSMD3Q7Z3D4 306 aa8.32□□□□□ -1.08
SEC23IP-206ENST00000475542 TRIM50Q86XT4 487 aa8.32□□□□□ -1.08
SEC23IP-206ENST00000475542 C1orf115Q9H7X2 142 aa8.32□□□□□ -1.08
SEC23IP-206ENST00000475542 KIAA1024Q9UPX6 916 aa8.32□□□□□ -1.08
SEC23IP-206ENST00000475542 SUPT5HO00267 1087 aaKnown RBP8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 ZBTB7BO15156 539 aaPredicted RBP8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 INHAP05111 366 aa8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 RASA1P20936 1047 aa8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 GPC1P35052 558 aa8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 PTSQ03393 145 aa8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 POU4F2Q12837 409 aa8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 KANK4Q5T7N3 995 aaPredicted RBP8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 OGFOD1Q8N543 542 aa8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 ZNF594Q96JF6 807 aaPredicted RBP8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 DNAAF2Q9NVR5 837 aaKnown RBP8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 HRH3Q9Y5N1 445 aa8.31□□□□□ -1.08
SEC23IP-206ENST00000475542 CCDC102BQ68D86 513 aa8.3□□□□□ -1.08
SEC23IP-206ENST00000475542 TPCN2Q8NHX9 752 aa8.3□□□□□ -1.08
SEC23IP-206ENST00000475542 CCDC97Q96F63 343 aaPredicted RBP8.3□□□□□ -1.08
SEC23IP-206ENST00000475542 GRIP2Q9C0E4 1043 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms