RNA–Protein interactions for RNA: ENST00000475211.1

ERGIC3-213, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-213ENST00000475211 AEBP1Q8IUX7 1158 aa18.38■□□□□ 0.53
ERGIC3-213ENST00000475211 MRS2Q9HD23 443 aa18.37■□□□□ 0.53
ERGIC3-213ENST00000475211 HMOX1P09601 288 aa18.36■□□□□ 0.53
ERGIC3-213ENST00000475211 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
ERGIC3-213ENST00000475211 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.36■□□□□ 0.53
ERGIC3-213ENST00000475211 PKD1L3Q7Z443 1732 aa18.35■□□□□ 0.53
ERGIC3-213ENST00000475211 EXOC5O00471 708 aa18.35■□□□□ 0.53
ERGIC3-213ENST00000475211 FCHSD2O94868 740 aa18.35■□□□□ 0.53
ERGIC3-213ENST00000475211 CCER2I3L3R5 266 aa18.34■□□□□ 0.53
ERGIC3-213ENST00000475211 PDE3BQ13370 1112 aa18.34■□□□□ 0.53
ERGIC3-213ENST00000475211 ZCRB1Q8TBF4 217 aaKnown RBP18.34■□□□□ 0.53
ERGIC3-213ENST00000475211 RSPH6AQ9H0K4 717 aa18.34■□□□□ 0.53
ERGIC3-213ENST00000475211 AMOTQ4VCS5 1084 aa18.33■□□□□ 0.52
ERGIC3-213ENST00000475211 CCDC184Q52MB2 194 aa18.33■□□□□ 0.52
ERGIC3-213ENST00000475211 KRT27Q7Z3Y8 459 aa18.33■□□□□ 0.52
ERGIC3-213ENST00000475211 PNNQ9H307 717 aaKnown RBP18.33■□□□□ 0.52
ERGIC3-213ENST00000475211 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
ERGIC3-213ENST00000475211 PCDH11XQ9BZA7 1347 aa18.32■□□□□ 0.52
ERGIC3-213ENST00000475211 PCDH11YQ9BZA8 1340 aa18.32■□□□□ 0.52
ERGIC3-213ENST00000475211 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
ERGIC3-213ENST00000475211 BRWD3Q6RI45 1802 aa18.31■□□□□ 0.52
ERGIC3-213ENST00000475211 PRKAR2BP31323 418 aa18.31■□□□□ 0.52
ERGIC3-213ENST00000475211 SHANK3Q9BYB0 1731 aa18.3■□□□□ 0.52
ERGIC3-213ENST00000475211 NEFMP07197 916 aa18.3■□□□□ 0.52
ERGIC3-213ENST00000475211 MIER1Q8N108 512 aa18.29■□□□□ 0.52
ERGIC3-213ENST00000475211 PNISRQ8TF01 805 aaKnown RBP18.29■□□□□ 0.52
ERGIC3-213ENST00000475211 ADAMTS8Q9UP79 889 aa18.28■□□□□ 0.52
ERGIC3-213ENST00000475211 BCL9O00512 1426 aa18.28■□□□□ 0.52
ERGIC3-213ENST00000475211 MAPK8IP3Q9UPT6 1336 aa18.27■□□□□ 0.52
ERGIC3-213ENST00000475211 MARCH10Q8NA82 808 aaPredicted RBP18.27■□□□□ 0.52
ERGIC3-213ENST00000475211 GAS2L2Q8NHY3 880 aa18.27■□□□□ 0.52
ERGIC3-213ENST00000475211 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.52
ERGIC3-213ENST00000475211 ZNF530Q6P9A1 599 aaPredicted RBP18.26■□□□□ 0.51
ERGIC3-213ENST00000475211 IFNL2Q8IZJ0 200 aa18.26■□□□□ 0.51
ERGIC3-213ENST00000475211 PLEKHF1Q96S99 279 aa18.26■□□□□ 0.51
ERGIC3-213ENST00000475211 CYP27B1O15528 508 aa18.25■□□□□ 0.51
ERGIC3-213ENST00000475211 PHKG2P15735 406 aa18.25■□□□□ 0.51
ERGIC3-213ENST00000475211 FAM196AQ6ZSG2 479 aa18.25■□□□□ 0.51
ERGIC3-213ENST00000475211 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
ERGIC3-213ENST00000475211 MTHFSDQ2M296 383 aaKnown RBP18.24■□□□□ 0.51
ERGIC3-213ENST00000475211 C1orf141Q5JVX7 400 aa18.24■□□□□ 0.51
ERGIC3-213ENST00000475211 PHACTR3Q96KR7 559 aa18.24■□□□□ 0.51
ERGIC3-213ENST00000475211 NKX1-1Q15270 411 aaPredicted RBP18.23■□□□□ 0.51
ERGIC3-213ENST00000475211 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
ERGIC3-213ENST00000475211 AKAP4Q5JQC9 854 aa18.22■□□□□ 0.51
ERGIC3-213ENST00000475211 MAP3K5Q99683 1374 aa18.21■□□□□ 0.51
ERGIC3-213ENST00000475211 FAM182BQ5T319 152 aa18.2■□□□□ 0.5
ERGIC3-213ENST00000475211 CCDC146Q8IYE0 955 aa18.2■□□□□ 0.5
ERGIC3-213ENST00000475211 DCAF5Q96JK2 942 aa18.2■□□□□ 0.5
ERGIC3-213ENST00000475211 GNAT3A8MTJ3 354 aa18.19■□□□□ 0.5
ERGIC3-213ENST00000475211 NFE2L2Q16236 605 aa18.19■□□□□ 0.5
ERGIC3-213ENST00000475211 FAM9BQ8IZU0 186 aa18.19■□□□□ 0.5
ERGIC3-213ENST00000475211 KDM6AO15550 1401 aaPredicted RBP18.18■□□□□ 0.5
ERGIC3-213ENST00000475211 NHSQ6T4R5 1651 aa18.18■□□□□ 0.5
ERGIC3-213ENST00000475211 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
ERGIC3-213ENST00000475211 EP400Q96L91 3159 aa18.17■□□□□ 0.5
ERGIC3-213ENST00000475211 HTATSF1O43719 755 aaKnown RBP18.17■□□□□ 0.5
ERGIC3-213ENST00000475211 ADAMTS7Q9UKP4 1686 aa18.17■□□□□ 0.5
ERGIC3-213ENST00000475211 TOGARAM1Q9Y4F4 1720 aa18.16■□□□□ 0.5
ERGIC3-213ENST00000475211 SBF2Q86WG5 1849 aa18.15■□□□□ 0.5
ERGIC3-213ENST00000475211 ERVV-2B6SEH9 535 aa18.15■□□□□ 0.5
ERGIC3-213ENST00000475211 TMPOP42166 694 aaKnown RBP18.15■□□□□ 0.5
ERGIC3-213ENST00000475211 LMOD3Q0VAK6 560 aa18.15■□□□□ 0.5
ERGIC3-213ENST00000475211 MPRIPQ6WCQ1 1025 aa18.15■□□□□ 0.5
ERGIC3-213ENST00000475211 RTF1Q92541 710 aaKnown RBP18.15■□□□□ 0.5
ERGIC3-213ENST00000475211 MRC1P22897 1456 aa18.14■□□□□ 0.5
ERGIC3-213ENST00000475211 BCL11BQ9C0K0 894 aaPredicted RBP18.14■□□□□ 0.49
ERGIC3-213ENST00000475211 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
ERGIC3-213ENST00000475211 SCN11AQ9UI33 1791 aa18.14■□□□□ 0.49
ERGIC3-213ENST00000475211 APAF1O14727 1248 aa18.13■□□□□ 0.49
ERGIC3-213ENST00000475211 RNMTO43148 476 aaKnown RBP18.13■□□□□ 0.49
ERGIC3-213ENST00000475211 TRIM37O94972 964 aa18.13■□□□□ 0.49
ERGIC3-213ENST00000475211 RIPK4P57078 832 aa18.13■□□□□ 0.49
ERGIC3-213ENST00000475211 CCDC125Q86Z20 511 aa18.13■□□□□ 0.49
ERGIC3-213ENST00000475211 ACSBG1Q96GR2 724 aa18.13■□□□□ 0.49
ERGIC3-213ENST00000475211 PRIM1P49642 420 aaKnown RBP18.12■□□□□ 0.49
ERGIC3-213ENST00000475211 SYTL4Q96C24 671 aaPredicted RBP18.12■□□□□ 0.49
ERGIC3-213ENST00000475211 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
ERGIC3-213ENST00000475211 TMOD3Q9NYL9 352 aa18.11■□□□□ 0.49
ERGIC3-213ENST00000475211 TNS1Q9HBL0 1735 aaKnown RBP18.11■□□□□ 0.49
ERGIC3-213ENST00000475211 DLG5Q8TDM6 1919 aa18.11■□□□□ 0.49
ERGIC3-213ENST00000475211 KCNQ2O43526 872 aa18.1■□□□□ 0.49
ERGIC3-213ENST00000475211 CABP4P57796 275 aa18.1■□□□□ 0.49
ERGIC3-213ENST00000475211 SF3B2Q13435 895 aaKnown RBP18.1■□□□□ 0.49
ERGIC3-213ENST00000475211 NGEFQ8N5V2 710 aa18.1■□□□□ 0.49
ERGIC3-213ENST00000475211 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
ERGIC3-213ENST00000475211 SLC52A2Q9HAB3 445 aa18.1■□□□□ 0.49
ERGIC3-213ENST00000475211 LGR6Q9HBX8 967 aa18.1■□□□□ 0.49
ERGIC3-213ENST00000475211 RRP7AQ9Y3A4 280 aaKnown RBP18.1■□□□□ 0.49
ERGIC3-213ENST00000475211 TEFQ10587 303 aa18.09■□□□□ 0.49
ERGIC3-213ENST00000475211 NEUROD2Q15784 382 aa18.09■□□□□ 0.49
ERGIC3-213ENST00000475211 ITGB4P16144 1822 aa18.09■□□□□ 0.49
ERGIC3-213ENST00000475211 SRCAPQ6ZRS2 3230 aa18.09■□□□□ 0.49
ERGIC3-213ENST00000475211 MCM10Q7L590 875 aa18.08■□□□□ 0.48
ERGIC3-213ENST00000475211 UPF1Q92900 1129 aaKnown RBP eCLIP18.08■□□□□ 0.48
ERGIC3-213ENST00000475211 BTAF1O14981 1849 aa18.07■□□□□ 0.48
ERGIC3-213ENST00000475211 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
ERGIC3-213ENST00000475211 CCDC27Q2M243 656 aa18.07■□□□□ 0.48
ERGIC3-213ENST00000475211 PIGBQ92521 554 aa18.07■□□□□ 0.48
ERGIC3-213ENST00000475211 DCTN1Q14203 1278 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms