RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 KIF24Q5T7B8 1368 aa15.18■□□□□ 0.02
ARPC1B-216ENST00000474880 SMG6Q86US8 1419 aaKnown RBP15.17■□□□□ 0.02
ARPC1B-216ENST00000474880 USHBP1Q8N6Y0 703 aa15.17■□□□□ 0.02
ARPC1B-216ENST00000474880 DDX54Q8TDD1 881 aaKnown RBP15.17■□□□□ 0.02
ARPC1B-216ENST00000474880 DOT1LQ8TEK3 1739 aa15.17■□□□□ 0.02
ARPC1B-216ENST00000474880 ANO8Q9HCE9 1232 aaPredicted RBP15.16■□□□□ 0.02
ARPC1B-216ENST00000474880 TXNRD1Q16881 649 aa15.15■□□□□ 0.02
ARPC1B-216ENST00000474880 ZCRB1Q8TBF4 217 aaKnown RBP15.15■□□□□ 0.02
ARPC1B-216ENST00000474880 PPM1GO15355 546 aaPredicted RBP15.14■□□□□ 0.01
ARPC1B-216ENST00000474880 WASHC2AQ641Q2 1341 aa15.14■□□□□ 0.01
ARPC1B-216ENST00000474880 CASZ1Q86V15 1759 aa15.13■□□□□ 0.01
ARPC1B-216ENST00000474880 TNNT2P45379 298 aaPredicted RBP15.12■□□□□ 0.01
ARPC1B-216ENST00000474880 MORC1Q86VD1 984 aa15.12■□□□□ 0.01
ARPC1B-216ENST00000474880 RAPGEF4Q8WZA2 1011 aa15.12■□□□□ 0.01
ARPC1B-216ENST00000474880 POLKQ9UBT6 870 aa15.12■□□□□ 0.01
ARPC1B-216ENST00000474880 PKD1L3Q7Z443 1732 aa15.11■□□□□ 0.01
ARPC1B-216ENST00000474880 PAPPAQ13219 1627 aa15.1■□□□□ 0.01
ARPC1B-216ENST00000474880 NCAPD2Q15021 1401 aa15.1■□□□□ 0.01
ARPC1B-216ENST00000474880 LY75O60449 1722 aa15.1■□□□□ 0.01
ARPC1B-216ENST00000474880 TATP17735 454 aaPredicted RBP15.1■□□□□ 0.01
ARPC1B-216ENST00000474880 PRIM1P49642 420 aaKnown RBP15.1■□□□□ 0.01
ARPC1B-216ENST00000474880 PDGFDQ9GZP0 370 aaPredicted RBP15.1■□□□□ 0.01
ARPC1B-216ENST00000474880 ITGB4P16144 1822 aa15.1■□□□□ 0.01
ARPC1B-216ENST00000474880 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
ARPC1B-216ENST00000474880 ZEB1P37275 1124 aaPredicted RBP15.08■□□□□ 0
ARPC1B-216ENST00000474880 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0
ARPC1B-216ENST00000474880 EYA1Q99502 592 aa15.08■□□□□ 0
ARPC1B-216ENST00000474880 TOGARAM1Q9Y4F4 1720 aa15.07■□□□□ 0
ARPC1B-216ENST00000474880 PER1O15534 1290 aaPredicted RBP15.07■□□□□ 0
ARPC1B-216ENST00000474880 SLC15A2Q16348 729 aa15.07■□□□□ 0
ARPC1B-216ENST00000474880 LRRC4BQ9NT99 713 aa15.07■□□□□ 0
ARPC1B-216ENST00000474880 STK32BQ9NY57 414 aa15.07■□□□□ 0
ARPC1B-216ENST00000474880 TUBGCP6Q96RT7 1819 aa15.06■□□□□ 0
ARPC1B-216ENST00000474880 SPON1Q9HCB6 807 aa15.06■□□□□ 0
ARPC1B-216ENST00000474880 PCDH11XQ9BZA7 1347 aa15.06■□□□□ 0
ARPC1B-216ENST00000474880 PCDH11YQ9BZA8 1340 aa15.06■□□□□ 0
ARPC1B-216ENST00000474880 CYP27B1O15528 508 aa15.05■□□□□ -0
ARPC1B-216ENST00000474880 EIF4A2Q14240 407 aaKnown RBP15.05■□□□□ -0
ARPC1B-216ENST00000474880 CC2D1BQ5T0F9 858 aaKnown RBP15.05■□□□□ -0
ARPC1B-216ENST00000474880 NPC1L1Q9UHC9 1359 aa15.05■□□□□ -0
ARPC1B-216ENST00000474880 QSER1Q2KHR3 1735 aa15.04■□□□□ -0
ARPC1B-216ENST00000474880 ZBTB7AO95365 584 aa15.03■□□□□ -0
ARPC1B-216ENST00000474880 KCNQ4P56696 695 aa15.03■□□□□ -0
ARPC1B-216ENST00000474880 ZNF827Q17R98 1081 aa15.03■□□□□ -0
ARPC1B-216ENST00000474880 TAF1LQ8IZX4 1826 aa15.03■□□□□ -0
ARPC1B-216ENST00000474880 SLC27A3Q5K4L6 730 aa15.02■□□□□ -0
ARPC1B-216ENST00000474880 CNGB1Q14028 1251 aaPredicted RBP15.01□□□□□ -0.01
ARPC1B-216ENST00000474880 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
ARPC1B-216ENST00000474880 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
ARPC1B-216ENST00000474880 IGSF1Q8N6C5 1336 aa15□□□□□ -0.01
ARPC1B-216ENST00000474880 NKX1-1Q15270 411 aaPredicted RBP15□□□□□ -0.01
ARPC1B-216ENST00000474880 PPP1R1BQ9UD71 204 aaPredicted RBP15□□□□□ -0.01
ARPC1B-216ENST00000474880 SPG7Q9UQ90 795 aa15□□□□□ -0.01
ARPC1B-216ENST00000474880 C5P01031 1676 aa15□□□□□ -0.01
ARPC1B-216ENST00000474880 PTGER2P43116 358 aa14.99□□□□□ -0.01
ARPC1B-216ENST00000474880 MPRIPQ6WCQ1 1025 aa14.99□□□□□ -0.01
ARPC1B-216ENST00000474880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.01
ARPC1B-216ENST00000474880 CCNL1Q9UK58 526 aaPredicted RBP14.98□□□□□ -0.01
ARPC1B-216ENST00000474880 MTHFSP49914 203 aa14.97□□□□□ -0.01
ARPC1B-216ENST00000474880 MTFR1LQ9H019 292 aa14.97□□□□□ -0.01
ARPC1B-216ENST00000474880 COL24A1Q17RW2 1714 aa14.97□□□□□ -0.01
ARPC1B-216ENST00000474880 PHKG2P15735 406 aa14.96□□□□□ -0.01
ARPC1B-216ENST00000474880 IFNL2Q8IZJ0 200 aa14.96□□□□□ -0.01
ARPC1B-216ENST00000474880 PIGBQ92521 554 aa14.96□□□□□ -0.01
ARPC1B-216ENST00000474880 SGIP1Q9BQI5 828 aa14.96□□□□□ -0.01
ARPC1B-216ENST00000474880 PALLDQ8WX93 1383 aa14.96□□□□□ -0.02
ARPC1B-216ENST00000474880 PLEKHG2Q9H7P9 1386 aa14.96□□□□□ -0.02
ARPC1B-216ENST00000474880 PNPLA7Q6ZV29 1317 aa14.95□□□□□ -0.02
ARPC1B-216ENST00000474880 AEBP1Q8IUX7 1158 aa14.95□□□□□ -0.02
ARPC1B-216ENST00000474880 TFCP2L1Q9NZI6 479 aa14.95□□□□□ -0.02
ARPC1B-216ENST00000474880 VIRMAQ69YN4 1812 aaKnown RBP14.94□□□□□ -0.02
ARPC1B-216ENST00000474880 IL13P35225 146 aa14.94□□□□□ -0.02
ARPC1B-216ENST00000474880 UBR3Q6ZT12 1888 aa14.93□□□□□ -0.02
ARPC1B-216ENST00000474880 C4BP0C0L5 1744 aa14.92□□□□□ -0.02
ARPC1B-216ENST00000474880 DIAPH1O60610 1272 aaKnown RBP14.92□□□□□ -0.02
ARPC1B-216ENST00000474880 PLEKHO1Q53GL0 409 aaPredicted RBP14.92□□□□□ -0.02
ARPC1B-216ENST00000474880 SULT6B1Q6IMI4 303 aa14.92□□□□□ -0.02
ARPC1B-216ENST00000474880 SMARCC1Q92922 1105 aaPredicted RBP14.92□□□□□ -0.02
ARPC1B-216ENST00000474880 CFAP53Q96M91 514 aa14.92□□□□□ -0.02
ARPC1B-216ENST00000474880 SCN11AQ9UI33 1791 aa14.91□□□□□ -0.02
ARPC1B-216ENST00000474880 KDRP35968 1356 aa14.91□□□□□ -0.02
ARPC1B-216ENST00000474880 ZNF530Q6P9A1 599 aaPredicted RBP14.91□□□□□ -0.02
ARPC1B-216ENST00000474880 SLC16A10Q8TF71 515 aa14.91□□□□□ -0.02
ARPC1B-216ENST00000474880 TMOD3Q9NYL9 352 aa14.91□□□□□ -0.02
ARPC1B-216ENST00000474880 ASAP1Q9ULH1 1129 aa14.91□□□□□ -0.02
ARPC1B-216ENST00000474880 AMOTQ4VCS5 1084 aa14.9□□□□□ -0.02
ARPC1B-216ENST00000474880 COL23A1Q86Y22 540 aaPredicted RBP14.9□□□□□ -0.02
ARPC1B-216ENST00000474880 FHDC1Q9C0D6 1143 aaPredicted RBP14.9□□□□□ -0.02
ARPC1B-216ENST00000474880 KDM6AO15550 1401 aaPredicted RBP14.9□□□□□ -0.02
ARPC1B-216ENST00000474880 PPP2R1AP30153 589 aa14.89□□□□□ -0.03
ARPC1B-216ENST00000474880 DDX10Q13206 875 aaKnown RBP14.89□□□□□ -0.03
ARPC1B-216ENST00000474880 DCAF5Q96JK2 942 aa14.89□□□□□ -0.03
ARPC1B-216ENST00000474880 ARXQ96QS3 562 aa14.89□□□□□ -0.03
ARPC1B-216ENST00000474880 LOC102724428A0A0B4J2F2 783 aa14.88□□□□□ -0.03
ARPC1B-216ENST00000474880 ERVV-2B6SEH9 535 aa14.88□□□□□ -0.03
ARPC1B-216ENST00000474880 HSP90AB1P08238 724 aaKnown RBP14.88□□□□□ -0.03
ARPC1B-216ENST00000474880 SIK1P57059 783 aa14.88□□□□□ -0.03
ARPC1B-216ENST00000474880 SYT17Q9BSW7 474 aa14.88□□□□□ -0.03
ARPC1B-216ENST00000474880 ATG3Q9NT62 314 aa14.88□□□□□ -0.03
ARPC1B-216ENST00000474880 COL3A1P02461 1466 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms