RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 CASZ1Q86V15 1759 aa25.44■■□□□ 1.66
DNMT3A-210ENST00000474807 KAT6BQ8WYB5 2073 aa25.42■■□□□ 1.66
DNMT3A-210ENST00000474807 SPON1Q9HCB6 807 aa25.42■■□□□ 1.66
DNMT3A-210ENST00000474807 ANKRD26Q9UPS8 1709 aa25.42■■□□□ 1.66
DNMT3A-210ENST00000474807 SLC15A2Q16348 729 aa25.41■■□□□ 1.66
DNMT3A-210ENST00000474807 PDGFDQ9GZP0 370 aaPredicted RBP25.41■■□□□ 1.66
DNMT3A-210ENST00000474807 STK32BQ9NY57 414 aa25.41■■□□□ 1.66
DNMT3A-210ENST00000474807 RAPGEF4Q8WZA2 1011 aa25.4■■□□□ 1.66
DNMT3A-210ENST00000474807 PAPPAQ13219 1627 aa25.39■■□□□ 1.66
DNMT3A-210ENST00000474807 DOT1LQ8TEK3 1739 aa25.39■■□□□ 1.65
DNMT3A-210ENST00000474807 WASHC2AQ641Q2 1341 aa25.38■■□□□ 1.65
DNMT3A-210ENST00000474807 MAP2P11137 1827 aaKnown RBP25.38■■□□□ 1.65
DNMT3A-210ENST00000474807 TATP17735 454 aaPredicted RBP25.38■■□□□ 1.65
DNMT3A-210ENST00000474807 PRIM1P49642 420 aaKnown RBP25.38■■□□□ 1.65
DNMT3A-210ENST00000474807 PANK3Q9H999 370 aa25.38■■□□□ 1.65
DNMT3A-210ENST00000474807 PPM1GO15355 546 aaPredicted RBP25.37■■□□□ 1.65
DNMT3A-210ENST00000474807 LRRC4BQ9NT99 713 aa25.37■■□□□ 1.65
DNMT3A-210ENST00000474807 NSD2O96028 1365 aa25.36■■□□□ 1.65
DNMT3A-210ENST00000474807 POLKQ9UBT6 870 aa25.36■■□□□ 1.65
DNMT3A-210ENST00000474807 NCAPD2Q15021 1401 aa25.36■■□□□ 1.65
DNMT3A-210ENST00000474807 SYTL4Q96C24 671 aaPredicted RBP25.35■■□□□ 1.65
DNMT3A-210ENST00000474807 ZBTB7AO95365 584 aa25.32■■□□□ 1.64
DNMT3A-210ENST00000474807 SLC27A3Q5K4L6 730 aa25.32■■□□□ 1.64
DNMT3A-210ENST00000474807 PCDH11XQ9BZA7 1347 aa25.32■■□□□ 1.64
DNMT3A-210ENST00000474807 PCDH11YQ9BZA8 1340 aa25.32■■□□□ 1.64
DNMT3A-210ENST00000474807 PPP1R1BQ9UD71 204 aaPredicted RBP25.31■■□□□ 1.64
DNMT3A-210ENST00000474807 LY75O60449 1722 aa25.3■■□□□ 1.64
DNMT3A-210ENST00000474807 TNNT2P45379 298 aaPredicted RBP25.3■■□□□ 1.64
DNMT3A-210ENST00000474807 ZNF827Q17R98 1081 aa25.3■■□□□ 1.64
DNMT3A-210ENST00000474807 CYP27B1O15528 508 aa25.29■■□□□ 1.64
DNMT3A-210ENST00000474807 PTGER2P43116 358 aa25.29■■□□□ 1.64
DNMT3A-210ENST00000474807 EYA1Q99502 592 aa25.29■■□□□ 1.64
DNMT3A-210ENST00000474807 PKD1L3Q7Z443 1732 aa25.29■■□□□ 1.64
DNMT3A-210ENST00000474807 AKT1S1Q96B36 256 aa25.28■■□□□ 1.64
DNMT3A-210ENST00000474807 ATF5Q9Y2D1 282 aaPredicted RBP25.27■■□□□ 1.64
DNMT3A-210ENST00000474807 MTFR1LQ9H019 292 aa25.26■■□□□ 1.63
DNMT3A-210ENST00000474807 KCNQ4P56696 695 aa25.25■■□□□ 1.63
DNMT3A-210ENST00000474807 EIF4A2Q14240 407 aaKnown RBP25.25■■□□□ 1.63
DNMT3A-210ENST00000474807 KIF7Q2M1P5 1343 aa25.23■■□□□ 1.63
DNMT3A-210ENST00000474807 SGIP1Q9BQI5 828 aa25.23■■□□□ 1.63
DNMT3A-210ENST00000474807 QSER1Q2KHR3 1735 aa25.23■■□□□ 1.63
DNMT3A-210ENST00000474807 TOGARAM1Q9Y4F4 1720 aa25.23■■□□□ 1.63
DNMT3A-210ENST00000474807 NKX1-1Q15270 411 aaPredicted RBP25.22■■□□□ 1.63
DNMT3A-210ENST00000474807 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.22■■□□□ 1.63
DNMT3A-210ENST00000474807 SPG7Q9UQ90 795 aa25.22■■□□□ 1.63
DNMT3A-210ENST00000474807 CCNL1Q9UK58 526 aaPredicted RBP25.21■■□□□ 1.63
DNMT3A-210ENST00000474807 MORC1Q86VD1 984 aa25.2■■□□□ 1.62
DNMT3A-210ENST00000474807 KNSTRNQ9Y448 316 aa25.2■■□□□ 1.62
DNMT3A-210ENST00000474807 PNPLA7Q6ZV29 1317 aa25.19■■□□□ 1.62
DNMT3A-210ENST00000474807 MPRIPQ6WCQ1 1025 aa25.19■■□□□ 1.62
DNMT3A-210ENST00000474807 ITGB4P16144 1822 aa25.19■■□□□ 1.62
DNMT3A-210ENST00000474807 IGSF1Q8N6C5 1336 aa25.18■■□□□ 1.62
DNMT3A-210ENST00000474807 TUBGCP6Q96RT7 1819 aa25.18■■□□□ 1.62
DNMT3A-210ENST00000474807 AMER1Q5JTC6 1135 aaPredicted RBP25.17■■□□□ 1.62
DNMT3A-210ENST00000474807 TFCP2L1Q9NZI6 479 aa25.17■■□□□ 1.62
DNMT3A-210ENST00000474807 PLEKHG2Q9H7P9 1386 aa25.17■■□□□ 1.62
DNMT3A-210ENST00000474807 PALLDQ8WX93 1383 aa25.16■■□□□ 1.62
DNMT3A-210ENST00000474807 UTRNP46939 3433 aa25.15■■□□□ 1.62
DNMT3A-210ENST00000474807 PHKG2P15735 406 aa25.15■■□□□ 1.62
DNMT3A-210ENST00000474807 SLC16A10Q8TF71 515 aa25.15■■□□□ 1.62
DNMT3A-210ENST00000474807 IFNL2Q8IZJ0 200 aa25.14■■□□□ 1.62
DNMT3A-210ENST00000474807 PIGBQ92521 554 aa25.14■■□□□ 1.62
DNMT3A-210ENST00000474807 FHDC1Q9C0D6 1143 aaPredicted RBP25.13■■□□□ 1.61
DNMT3A-210ENST00000474807 COL24A1Q17RW2 1714 aa25.12■■□□□ 1.61
DNMT3A-210ENST00000474807 PER1O15534 1290 aaPredicted RBP25.12■■□□□ 1.61
DNMT3A-210ENST00000474807 ARXQ96QS3 562 aa25.12■■□□□ 1.61
DNMT3A-210ENST00000474807 C5P01031 1676 aa25.12■■□□□ 1.61
DNMT3A-210ENST00000474807 SMARCC1Q92922 1105 aaPredicted RBP25.11■■□□□ 1.61
DNMT3A-210ENST00000474807 SYT17Q9BSW7 474 aa25.11■■□□□ 1.61
DNMT3A-210ENST00000474807 TAF1LQ8IZX4 1826 aa25.1■■□□□ 1.61
DNMT3A-210ENST00000474807 HMGB2P26583 209 aaKnown RBP25.08■■□□□ 1.61
DNMT3A-210ENST00000474807 DCAF8L1A6NGE4 600 aa25.07■■□□□ 1.6
DNMT3A-210ENST00000474807 COL23A1Q86Y22 540 aaPredicted RBP25.07■■□□□ 1.6
DNMT3A-210ENST00000474807 TMOD3Q9NYL9 352 aa25.07■■□□□ 1.6
DNMT3A-210ENST00000474807 MAP3K5Q99683 1374 aa25.06■■□□□ 1.6
DNMT3A-210ENST00000474807 IL13P35225 146 aa25.06■■□□□ 1.6
DNMT3A-210ENST00000474807 AEBP1Q8IUX7 1158 aa25.06■■□□□ 1.6
DNMT3A-210ENST00000474807 PLEKHO1Q53GL0 409 aaPredicted RBP25.05■■□□□ 1.6
DNMT3A-210ENST00000474807 C4BP0C0L5 1744 aa25.04■■□□□ 1.6
DNMT3A-210ENST00000474807 POLD1P28340 1107 aa25.04■■□□□ 1.6
DNMT3A-210ENST00000474807 AMOTQ4VCS5 1084 aa25.04■■□□□ 1.6
DNMT3A-210ENST00000474807 KDRP35968 1356 aa25.04■■□□□ 1.6
DNMT3A-210ENST00000474807 ASAP1Q9ULH1 1129 aa25.03■■□□□ 1.6
DNMT3A-210ENST00000474807 LOC102724428A0A0B4J2F2 783 aa25.02■■□□□ 1.6
DNMT3A-210ENST00000474807 MTHFSP49914 203 aa25.02■■□□□ 1.6
DNMT3A-210ENST00000474807 SIK1P57059 783 aa25.02■■□□□ 1.6
DNMT3A-210ENST00000474807 SULT6B1Q6IMI4 303 aa25.02■■□□□ 1.6
DNMT3A-210ENST00000474807 ERVV-2B6SEH9 535 aa25.01■■□□□ 1.59
DNMT3A-210ENST00000474807 MSH5O43196 834 aa25.01■■□□□ 1.59
DNMT3A-210ENST00000474807 HSP90AB1P08238 724 aaKnown RBP25.01■■□□□ 1.59
DNMT3A-210ENST00000474807 CC2D1BQ5T0F9 858 aaKnown RBP25.01■■□□□ 1.59
DNMT3A-210ENST00000474807 DCAF5Q96JK2 942 aa25.01■■□□□ 1.59
DNMT3A-210ENST00000474807 ATG3Q9NT62 314 aa25.01■■□□□ 1.59
DNMT3A-210ENST00000474807 ZNF530Q6P9A1 599 aaPredicted RBP25■■□□□ 1.59
DNMT3A-210ENST00000474807 FLAD1Q8NFF5 587 aa25■■□□□ 1.59
DNMT3A-210ENST00000474807 KDM6AO15550 1401 aaPredicted RBP24.99■■□□□ 1.59
DNMT3A-210ENST00000474807 AMIGO3Q86WK7 504 aa24.99■■□□□ 1.59
DNMT3A-210ENST00000474807 NPC1L1Q9UHC9 1359 aa24.98■■□□□ 1.59
DNMT3A-210ENST00000474807 YY1P25490 414 aa24.98■■□□□ 1.59
DNMT3A-210ENST00000474807 LINC00116Q8NCU8 138 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms