RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 PLEKHG2Q9H7P9 1386 aa11.02□□□□□ -0.65
CNN3-205ENST00000474409 PLEKHF1Q96S99 279 aa11.01□□□□□ -0.65
CNN3-205ENST00000474409 DISP2A7MBM2 1401 aa11.01□□□□□ -0.65
CNN3-205ENST00000474409 ATRNO75882 1429 aa11.01□□□□□ -0.65
CNN3-205ENST00000474409 TNS2Q63HR2 1409 aa11.01□□□□□ -0.65
CNN3-205ENST00000474409 SENP3-EIF4A1A0A087X0R7 540 aa11□□□□□ -0.65
CNN3-205ENST00000474409 TATP17735 454 aaPredicted RBP11□□□□□ -0.65
CNN3-205ENST00000474409 FNBP4Q8N3X1 1017 aaPredicted RBP11□□□□□ -0.65
CNN3-205ENST00000474409 SPATA31A1Q5TZJ5 1347 aa11□□□□□ -0.65
CNN3-205ENST00000474409 CACNA1FO60840 1977 aa10.99□□□□□ -0.65
CNN3-205ENST00000474409 APAF1O14727 1248 aa10.99□□□□□ -0.65
CNN3-205ENST00000474409 IL2RBP14784 551 aa10.99□□□□□ -0.65
CNN3-205ENST00000474409 VPS72Q15906 364 aa10.99□□□□□ -0.65
CNN3-205ENST00000474409 TCP11L2Q8N4U5 519 aa10.99□□□□□ -0.65
CNN3-205ENST00000474409 SPATA31A5Q5VU36 1347 aa10.99□□□□□ -0.65
CNN3-205ENST00000474409 SPATA31A7Q8IWB4 1347 aa10.99□□□□□ -0.65
CNN3-205ENST00000474409 PAPPAQ13219 1627 aa10.98□□□□□ -0.65
CNN3-205ENST00000474409 NEUROD2Q15784 382 aa10.98□□□□□ -0.65
CNN3-205ENST00000474409 GAS2L2Q8NHY3 880 aa10.98□□□□□ -0.65
CNN3-205ENST00000474409 TRPC5Q9UL62 973 aaPredicted RBP10.98□□□□□ -0.65
CNN3-205ENST00000474409 THRAP3Q9Y2W1 955 aaKnown RBP10.98□□□□□ -0.65
CNN3-205ENST00000474409 RRP7AQ9Y3A4 280 aaKnown RBP10.98□□□□□ -0.65
CNN3-205ENST00000474409 SALL2Q9Y467 1007 aaPredicted RBP10.98□□□□□ -0.65
CNN3-205ENST00000474409 MAP3K5Q99683 1374 aa10.98□□□□□ -0.65
CNN3-205ENST00000474409 NHSQ6T4R5 1651 aa10.98□□□□□ -0.65
CNN3-205ENST00000474409 LAMB4A4D0S4 1761 aa10.98□□□□□ -0.65
CNN3-205ENST00000474409 UBR2Q8IWV8 1755 aa10.98□□□□□ -0.65
CNN3-205ENST00000474409 BTAF1O14981 1849 aa10.98□□□□□ -0.65
CNN3-205ENST00000474409 NFE2L2Q16236 605 aa10.97□□□□□ -0.65
CNN3-205ENST00000474409 AMOTQ4VCS5 1084 aa10.97□□□□□ -0.65
CNN3-205ENST00000474409 PLEKHO1Q53GL0 409 aaPredicted RBP10.97□□□□□ -0.65
CNN3-205ENST00000474409 PHACTR3Q96KR7 559 aa10.97□□□□□ -0.65
CNN3-205ENST00000474409 PHF23Q9BUL5 403 aaPredicted RBP10.97□□□□□ -0.65
CNN3-205ENST00000474409 ZBED9Q6R2W3 1325 aa10.97□□□□□ -0.65
CNN3-205ENST00000474409 PCDH11XQ9BZA7 1347 aa10.96□□□□□ -0.65
CNN3-205ENST00000474409 PCDH11YQ9BZA8 1340 aa10.96□□□□□ -0.65
CNN3-205ENST00000474409 A0A0G2JS52 829 aa10.96□□□□□ -0.65
CNN3-205ENST00000474409 TMPOP42166 694 aaKnown RBP10.96□□□□□ -0.65
CNN3-205ENST00000474409 MYT1Q01538 1121 aa10.96□□□□□ -0.65
CNN3-205ENST00000474409 LMOD3Q0VAK6 560 aa10.96□□□□□ -0.65
CNN3-205ENST00000474409 MTHFSDQ2M296 383 aaKnown RBP10.96□□□□□ -0.65
CNN3-205ENST00000474409 ZNF772Q68DY9 489 aaPredicted RBP10.96□□□□□ -0.65
CNN3-205ENST00000474409 ZNF530Q6P9A1 599 aaPredicted RBP10.96□□□□□ -0.65
CNN3-205ENST00000474409 SPG7Q9UQ90 795 aa10.96□□□□□ -0.65
CNN3-205ENST00000474409 MRC1P22897 1456 aa10.95□□□□□ -0.66
CNN3-205ENST00000474409 RIPK4P57078 832 aa10.95□□□□□ -0.66
CNN3-205ENST00000474409 C1orf141Q5JVX7 400 aa10.95□□□□□ -0.66
CNN3-205ENST00000474409 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
CNN3-205ENST00000474409 NGEFQ8N5V2 710 aa10.95□□□□□ -0.66
CNN3-205ENST00000474409 CDCA7Q9BWT1 371 aaPredicted RBP10.95□□□□□ -0.66
CNN3-205ENST00000474409 C5P01031 1676 aa10.95□□□□□ -0.66
CNN3-205ENST00000474409 FAM98CQ17RN3 349 aaKnown RBP10.94□□□□□ -0.66
CNN3-205ENST00000474409 BARGINQ6ZT62 677 aa10.94□□□□□ -0.66
CNN3-205ENST00000474409 RTF1Q92541 710 aaKnown RBP10.94□□□□□ -0.66
CNN3-205ENST00000474409 AKAP4Q5JQC9 854 aa10.93□□□□□ -0.66
CNN3-205ENST00000474409 ZCRB1Q8TBF4 217 aaKnown RBP10.93□□□□□ -0.66
CNN3-205ENST00000474409 GJD4Q96KN9 370 aaPredicted RBP10.93□□□□□ -0.66
CNN3-205ENST00000474409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.93□□□□□ -0.66
CNN3-205ENST00000474409 GNAT3A8MTJ3 354 aa10.92□□□□□ -0.66
CNN3-205ENST00000474409 DDB1Q16531 1140 aa10.92□□□□□ -0.66
CNN3-205ENST00000474409 CCDC27Q2M243 656 aa10.92□□□□□ -0.66
CNN3-205ENST00000474409 IFNL2Q8IZJ0 200 aa10.92□□□□□ -0.66
CNN3-205ENST00000474409 QTRT2Q9H974 415 aaKnown RBP10.92□□□□□ -0.66
CNN3-205ENST00000474409 KDM6AO15550 1401 aaPredicted RBP10.92□□□□□ -0.66
CNN3-205ENST00000474409 TAF1LQ8IZX4 1826 aa10.91□□□□□ -0.66
CNN3-205ENST00000474409 EXOC5O00471 708 aa10.91□□□□□ -0.66
CNN3-205ENST00000474409 HSP90AB1P08238 724 aaKnown RBP10.91□□□□□ -0.66
CNN3-205ENST00000474409 PHKG2P15735 406 aa10.91□□□□□ -0.66
CNN3-205ENST00000474409 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
CNN3-205ENST00000474409 WWC1Q8IX03 1113 aa10.91□□□□□ -0.66
CNN3-205ENST00000474409 LY75O60449 1722 aa10.91□□□□□ -0.66
CNN3-205ENST00000474409 TNS1Q9HBL0 1735 aaKnown RBP10.91□□□□□ -0.66
CNN3-205ENST00000474409 HTATSF1O43719 755 aaKnown RBP10.9□□□□□ -0.66
CNN3-205ENST00000474409 CALD1Q05682 793 aaKnown RBP10.9□□□□□ -0.66
CNN3-205ENST00000474409 MCM10Q7L590 875 aa10.9□□□□□ -0.66
CNN3-205ENST00000474409 DDX54Q8TDD1 881 aaKnown RBP10.9□□□□□ -0.66
CNN3-205ENST00000474409 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
CNN3-205ENST00000474409 RGS12O14924 1447 aa10.9□□□□□ -0.66
CNN3-205ENST00000474409 ZNF521Q96K83 1311 aa10.89□□□□□ -0.67
CNN3-205ENST00000474409 CYP27B1O15528 508 aa10.89□□□□□ -0.67
CNN3-205ENST00000474409 RBM6P78332 1123 aaKnown RBP10.89□□□□□ -0.67
CNN3-205ENST00000474409 GOLGA2Q08379 1002 aa10.89□□□□□ -0.67
CNN3-205ENST00000474409 DCTN1Q14203 1278 aa10.89□□□□□ -0.67
CNN3-205ENST00000474409 MPRIPQ6WCQ1 1025 aa10.89□□□□□ -0.67
CNN3-205ENST00000474409 THUMPD2Q9BTF0 503 aaKnown RBP10.89□□□□□ -0.67
CNN3-205ENST00000474409 CEMIPQ8WUJ3 1361 aa10.89□□□□□ -0.67
CNN3-205ENST00000474409 RGPD3A6NKT7 1758 aaPredicted RBP10.88□□□□□ -0.67
CNN3-205ENST00000474409 RGPD4Q7Z3J3 1758 aa10.88□□□□□ -0.67
CNN3-205ENST00000474409 COL5A3P25940 1745 aaPredicted RBP10.88□□□□□ -0.67
CNN3-205ENST00000474409 TJP1Q07157 1748 aa10.88□□□□□ -0.67
CNN3-205ENST00000474409 PDE3BQ13370 1112 aa10.88□□□□□ -0.67
CNN3-205ENST00000474409 CICQ96RK0 1608 aaPredicted RBP10.87□□□□□ -0.67
CNN3-205ENST00000474409 RNMTO43148 476 aaKnown RBP10.87□□□□□ -0.67
CNN3-205ENST00000474409 RXRBP28702 533 aa10.87□□□□□ -0.67
CNN3-205ENST00000474409 TEFQ10587 303 aa10.87□□□□□ -0.67
CNN3-205ENST00000474409 WDR63Q8IWG1 891 aa10.87□□□□□ -0.67
CNN3-205ENST00000474409 SEPT12Q8IYM1 358 aa10.87□□□□□ -0.67
CNN3-205ENST00000474409 DCAF5Q96JK2 942 aa10.87□□□□□ -0.67
CNN3-205ENST00000474409 LAS1LQ9Y4W2 734 aaKnown RBP10.87□□□□□ -0.67
CNN3-205ENST00000474409 ZNF831Q5JPB2 1677 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms