RNA–Protein interactions for RNA: ENST00000473863.1

TRAIP-204, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-204ENST00000473863 USHBP1Q8N6Y0 703 aa17.68■□□□□ 0.42
TRAIP-204ENST00000473863 SPATA31A5Q5VU36 1347 aa17.68■□□□□ 0.42
TRAIP-204ENST00000473863 SPATA31A7Q8IWB4 1347 aa17.68■□□□□ 0.42
TRAIP-204ENST00000473863 VPS72Q15906 364 aa17.67■□□□□ 0.42
TRAIP-204ENST00000473863 THRAP3Q9Y2W1 955 aaKnown RBP17.67■□□□□ 0.42
TRAIP-204ENST00000473863 LRRC37A3O60309 1634 aa17.67■□□□□ 0.42
TRAIP-204ENST00000473863 ADAMTS7Q9UKP4 1686 aa17.67■□□□□ 0.42
TRAIP-204ENST00000473863 THSD7AQ9UPZ6 1657 aa17.67■□□□□ 0.42
TRAIP-204ENST00000473863 SPATA31A1Q5TZJ5 1347 aa17.67■□□□□ 0.42
TRAIP-204ENST00000473863 GLI3P10071 1580 aa17.66■□□□□ 0.42
TRAIP-204ENST00000473863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.42
TRAIP-204ENST00000473863 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
TRAIP-204ENST00000473863 TCP11L2Q8N4U5 519 aa17.65■□□□□ 0.42
TRAIP-204ENST00000473863 RAPGEF4Q8WZA2 1011 aa17.65■□□□□ 0.42
TRAIP-204ENST00000473863 USP21Q9UK80 565 aa17.65■□□□□ 0.42
TRAIP-204ENST00000473863 TNS2Q63HR2 1409 aa17.64■□□□□ 0.42
TRAIP-204ENST00000473863 APAF1O14727 1248 aa17.64■□□□□ 0.41
TRAIP-204ENST00000473863 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.41
TRAIP-204ENST00000473863 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
TRAIP-204ENST00000473863 CCDC27Q2M243 656 aa17.64■□□□□ 0.41
TRAIP-204ENST00000473863 AMOTQ4VCS5 1084 aa17.64■□□□□ 0.41
TRAIP-204ENST00000473863 CCDC125Q86Z20 511 aa17.64■□□□□ 0.41
TRAIP-204ENST00000473863 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
TRAIP-204ENST00000473863 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
TRAIP-204ENST00000473863 LRP5O75197 1615 aa17.64■□□□□ 0.41
TRAIP-204ENST00000473863 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
TRAIP-204ENST00000473863 IL2RBP14784 551 aa17.63■□□□□ 0.41
TRAIP-204ENST00000473863 TATP17735 454 aaPredicted RBP17.63■□□□□ 0.41
TRAIP-204ENST00000473863 TMPOP42166 694 aaKnown RBP17.63■□□□□ 0.41
TRAIP-204ENST00000473863 IFFO2Q5TF58 517 aa17.63■□□□□ 0.41
TRAIP-204ENST00000473863 BARGINQ6ZT62 677 aa17.63■□□□□ 0.41
TRAIP-204ENST00000473863 CDCA7Q9BWT1 371 aaPredicted RBP17.63■□□□□ 0.41
TRAIP-204ENST00000473863 ZNF521Q96K83 1311 aa17.61■□□□□ 0.41
TRAIP-204ENST00000473863 LMOD3Q0VAK6 560 aa17.6■□□□□ 0.41
TRAIP-204ENST00000473863 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
TRAIP-204ENST00000473863 PLEKHO1Q53GL0 409 aaPredicted RBP17.6■□□□□ 0.41
TRAIP-204ENST00000473863 TRPC5Q9UL62 973 aaPredicted RBP17.6■□□□□ 0.41
TRAIP-204ENST00000473863 MAP3K5Q99683 1374 aa17.6■□□□□ 0.41
TRAIP-204ENST00000473863 SCN11AQ9UI33 1791 aa17.59■□□□□ 0.41
TRAIP-204ENST00000473863 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
TRAIP-204ENST00000473863 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
TRAIP-204ENST00000473863 HTATSF1O43719 755 aaKnown RBP17.58■□□□□ 0.4
TRAIP-204ENST00000473863 SPG7Q9UQ90 795 aa17.58■□□□□ 0.4
TRAIP-204ENST00000473863 MRC1P22897 1456 aa17.57■□□□□ 0.4
TRAIP-204ENST00000473863 YTHDC1Q96MU7 727 aaKnown RBP17.57■□□□□ 0.4
TRAIP-204ENST00000473863 SIPA1L3O60292 1781 aaPredicted RBP17.56■□□□□ 0.4
TRAIP-204ENST00000473863 RIPK4P57078 832 aa17.56■□□□□ 0.4
TRAIP-204ENST00000473863 AKAP4Q5JQC9 854 aa17.56■□□□□ 0.4
TRAIP-204ENST00000473863 GJD4Q96KN9 370 aaPredicted RBP17.56■□□□□ 0.4
TRAIP-204ENST00000473863 USP35Q9P2H5 1018 aa17.56■□□□□ 0.4
TRAIP-204ENST00000473863 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
TRAIP-204ENST00000473863 CEMIPQ8WUJ3 1361 aa17.55■□□□□ 0.4
TRAIP-204ENST00000473863 ZNF530Q6P9A1 599 aaPredicted RBP17.55■□□□□ 0.4
TRAIP-204ENST00000473863 WWC1Q8IX03 1113 aa17.55■□□□□ 0.4
TRAIP-204ENST00000473863 ZCRB1Q8TBF4 217 aaKnown RBP17.55■□□□□ 0.4
TRAIP-204ENST00000473863 RRP7AQ9Y3A4 280 aaKnown RBP17.55■□□□□ 0.4
TRAIP-204ENST00000473863 CCDC9Q9Y3X0 531 aaKnown RBP17.55■□□□□ 0.4
TRAIP-204ENST00000473863 GNAT3A8MTJ3 354 aa17.54■□□□□ 0.4
TRAIP-204ENST00000473863 TOGARAM1Q9Y4F4 1720 aa17.54■□□□□ 0.4
TRAIP-204ENST00000473863 KDM6AO15550 1401 aaPredicted RBP17.54■□□□□ 0.4
TRAIP-204ENST00000473863 IL16Q14005 1332 aa17.53■□□□□ 0.4
TRAIP-204ENST00000473863 ONECUT3O60422 494 aaPredicted RBP17.53■□□□□ 0.4
TRAIP-204ENST00000473863 PHKG2P15735 406 aa17.53■□□□□ 0.4
TRAIP-204ENST00000473863 YY1P25490 414 aa17.53■□□□□ 0.4
TRAIP-204ENST00000473863 PDE3BQ13370 1112 aa17.53■□□□□ 0.4
TRAIP-204ENST00000473863 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
TRAIP-204ENST00000473863 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
TRAIP-204ENST00000473863 IFNL2Q8IZJ0 200 aa17.53■□□□□ 0.4
TRAIP-204ENST00000473863 CYP27B1O15528 508 aa17.52■□□□□ 0.4
TRAIP-204ENST00000473863 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.4
TRAIP-204ENST00000473863 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
TRAIP-204ENST00000473863 NKX1-1Q15270 411 aaPredicted RBP17.51■□□□□ 0.39
TRAIP-204ENST00000473863 NEUROD2Q15784 382 aa17.51■□□□□ 0.39
TRAIP-204ENST00000473863 RTF1Q92541 710 aaKnown RBP17.51■□□□□ 0.39
TRAIP-204ENST00000473863 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
TRAIP-204ENST00000473863 DEFB132Q7Z7B7 95 aa17.5■□□□□ 0.39
TRAIP-204ENST00000473863 KDM3BQ7LBC6 1761 aa17.5■□□□□ 0.39
TRAIP-204ENST00000473863 DOT1LQ8TEK3 1739 aa17.5■□□□□ 0.39
TRAIP-204ENST00000473863 BCL9O00512 1426 aa17.49■□□□□ 0.39
TRAIP-204ENST00000473863 EXOC5O00471 708 aa17.49■□□□□ 0.39
TRAIP-204ENST00000473863 DDB1Q16531 1140 aa17.49■□□□□ 0.39
TRAIP-204ENST00000473863 PAPPAQ13219 1627 aa17.49■□□□□ 0.39
TRAIP-204ENST00000473863 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
TRAIP-204ENST00000473863 DCAF5Q96JK2 942 aa17.48■□□□□ 0.39
TRAIP-204ENST00000473863 SALL2Q9Y467 1007 aaPredicted RBP17.48■□□□□ 0.39
TRAIP-204ENST00000473863 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
TRAIP-204ENST00000473863 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
TRAIP-204ENST00000473863 E9PSI1 815 aa17.47■□□□□ 0.39
TRAIP-204ENST00000473863 ITGB4P16144 1822 aa17.47■□□□□ 0.39
TRAIP-204ENST00000473863 PSDA5PKW4 1024 aaPredicted RBP17.46■□□□□ 0.39
TRAIP-204ENST00000473863 RNMTO43148 476 aaKnown RBP17.46■□□□□ 0.39
TRAIP-204ENST00000473863 MCM10Q7L590 875 aa17.46■□□□□ 0.39
TRAIP-204ENST00000473863 IL17REQ8NFR9 667 aa17.46■□□□□ 0.39
TRAIP-204ENST00000473863 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
TRAIP-204ENST00000473863 BABAM1Q9NWV8 329 aa17.46■□□□□ 0.39
TRAIP-204ENST00000473863 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
TRAIP-204ENST00000473863 TRMT2AQ8IZ69 625 aaKnown RBP17.45■□□□□ 0.38
TRAIP-204ENST00000473863 NHSQ6T4R5 1651 aa17.45■□□□□ 0.38
TRAIP-204ENST00000473863 SLFN5Q08AF3 891 aa17.44■□□□□ 0.38
TRAIP-204ENST00000473863 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms