RNA–Protein interactions for RNA: ENST00000473824.1

UBE2D1-202, Transcript of ubiquitin conjugating enzyme E2 D1, humanhuman

TSL 2

Gene UBE2D1, Length 839 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D1-202ENST00000473824 CDCA7Q9BWT1 371 aaPredicted RBP11.17□□□□□ -0.62
UBE2D1-202ENST00000473824 SPINT1O43278 529 aa11.16□□□□□ -0.62
UBE2D1-202ENST00000473824 SKIP12755 728 aa11.16□□□□□ -0.62
UBE2D1-202ENST00000473824 PTGIRP43119 386 aa11.16□□□□□ -0.62
UBE2D1-202ENST00000473824 CALR3Q96L12 384 aaKnown RBP11.16□□□□□ -0.62
UBE2D1-202ENST00000473824 PIK3CDO00329 1044 aa11.15□□□□□ -0.62
UBE2D1-202ENST00000473824 TSGA10IPQ3SY00 556 aa11.15□□□□□ -0.62
UBE2D1-202ENST00000473824 LZTS3O60299 673 aaPredicted RBP11.14□□□□□ -0.63
UBE2D1-202ENST00000473824 SNRPBP14678 240 aaKnown RBP11.14□□□□□ -0.63
UBE2D1-202ENST00000473824 OSBPL3Q9H4L5 887 aa11.14□□□□□ -0.63
UBE2D1-202ENST00000473824 ZNF395Q9H8N7 513 aaPredicted RBP11.13□□□□□ -0.63
UBE2D1-202ENST00000473824 MAN1A2O60476 641 aa11.12□□□□□ -0.63
UBE2D1-202ENST00000473824 EML3Q32P44 896 aa11.12□□□□□ -0.63
UBE2D1-202ENST00000473824 C14orf37Q86TY3 774 aa11.12□□□□□ -0.63
UBE2D1-202ENST00000473824 KDF1Q8NAX2 398 aaPredicted RBP11.12□□□□□ -0.63
UBE2D1-202ENST00000473824 SOS2Q07890 1332 aaPredicted RBP11.11□□□□□ -0.63
UBE2D1-202ENST00000473824 TTLL8A6PVC2 850 aa11.11□□□□□ -0.63
UBE2D1-202ENST00000473824 UCN2Q96RP3 112 aa11.11□□□□□ -0.63
UBE2D1-202ENST00000473824 INSM2Q96T92 566 aaPredicted RBP11.11□□□□□ -0.63
UBE2D1-202ENST00000473824 POLMQ9NP87 494 aaPredicted RBP11.11□□□□□ -0.63
UBE2D1-202ENST00000473824 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
UBE2D1-202ENST00000473824 USP17L5A8MUK1 530 aa11.1□□□□□ -0.63
UBE2D1-202ENST00000473824 GNRH1P01148 92 aa11.1□□□□□ -0.63
UBE2D1-202ENST00000473824 ERICH6Q7L0X2 663 aa11.1□□□□□ -0.63
UBE2D1-202ENST00000473824 ATP9BO43861 1147 aa11.09□□□□□ -0.63
UBE2D1-202ENST00000473824 A0A1W2PRU2 124 aa11.08□□□□□ -0.64
UBE2D1-202ENST00000473824 MEN1O00255 615 aa11.08□□□□□ -0.64
UBE2D1-202ENST00000473824 CTSOP43234 321 aaPredicted RBP11.08□□□□□ -0.64
UBE2D1-202ENST00000473824 NCOA4Q13772 614 aa11.08□□□□□ -0.64
UBE2D1-202ENST00000473824 TBC1D9Q6ZT07 1266 aa11.08□□□□□ -0.64
UBE2D1-202ENST00000473824 NLRP3Q96P20 1036 aa11.08□□□□□ -0.64
UBE2D1-202ENST00000473824 ARHGEF10LQ9HCE6 1279 aa11.08□□□□□ -0.64
UBE2D1-202ENST00000473824 NOD1Q9Y239 953 aa11.08□□□□□ -0.64
UBE2D1-202ENST00000473824 CLN3Q13286 438 aa11.07□□□□□ -0.64
UBE2D1-202ENST00000473824 ESCO1Q5FWF5 840 aa11.07□□□□□ -0.64
UBE2D1-202ENST00000473824 PLEKHM2Q8IWE5 1019 aa11.07□□□□□ -0.64
UBE2D1-202ENST00000473824 USP17L3A6NCW0 530 aa11.06□□□□□ -0.64
UBE2D1-202ENST00000473824 USP17L4A6NCW7 530 aa11.06□□□□□ -0.64
UBE2D1-202ENST00000473824 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.06□□□□□ -0.64
UBE2D1-202ENST00000473824 USP17L2Q6R6M4 530 aa11.06□□□□□ -0.64
UBE2D1-202ENST00000473824 USP17L1Q7RTZ2 530 aa11.06□□□□□ -0.64
UBE2D1-202ENST00000473824 DEPDC4Q8N2C3 294 aa11.06□□□□□ -0.64
UBE2D1-202ENST00000473824 DNMT3LQ9UJW3 386 aa11.06□□□□□ -0.64
UBE2D1-202ENST00000473824 GPC1P35052 558 aa11.05□□□□□ -0.64
UBE2D1-202ENST00000473824 FIGNL2A6NMB9 653 aa11.04□□□□□ -0.64
UBE2D1-202ENST00000473824 SOBPA7XYQ1 873 aa11.04□□□□□ -0.64
UBE2D1-202ENST00000473824 RNF144AP50876 292 aaPredicted RBP11.04□□□□□ -0.64
UBE2D1-202ENST00000473824 RNF217Q8TC41 542 aa11.04□□□□□ -0.64
UBE2D1-202ENST00000473824 PPP1R12CQ9BZL4 782 aa11.04□□□□□ -0.64
UBE2D1-202ENST00000473824 RAB6BQ9NRW1 208 aa11.04□□□□□ -0.64
UBE2D1-202ENST00000473824 TFIP11Q9UBB9 837 aaKnown RBP11.04□□□□□ -0.64
UBE2D1-202ENST00000473824 PALM3A6NDB9 673 aaPredicted RBP11.03□□□□□ -0.64
UBE2D1-202ENST00000473824 FOXD4L5Q5VV16 416 aaPredicted RBP11.03□□□□□ -0.64
UBE2D1-202ENST00000473824 TRIM50Q86XT4 487 aa11.03□□□□□ -0.64
UBE2D1-202ENST00000473824 CNKSR1Q969H4 720 aa11.03□□□□□ -0.64
UBE2D1-202ENST00000473824 ESYT1Q9BSJ8 1104 aa11.03□□□□□ -0.64
UBE2D1-202ENST00000473824 GTF2IP78347 998 aa11.02□□□□□ -0.65
UBE2D1-202ENST00000473824 MAFBQ9Y5Q3 323 aaPredicted RBP11.02□□□□□ -0.65
UBE2D1-202ENST00000473824 ATP1A2P50993 1020 aa11.01□□□□□ -0.65
UBE2D1-202ENST00000473824 PSME1Q06323 249 aa11.01□□□□□ -0.65
UBE2D1-202ENST00000473824 SLC27A3Q5K4L6 730 aa11.01□□□□□ -0.65
UBE2D1-202ENST00000473824 LYSMD3Q7Z3D4 306 aa11.01□□□□□ -0.65
UBE2D1-202ENST00000473824 IL2RAP01589 272 aa11□□□□□ -0.65
UBE2D1-202ENST00000473824 XAGE2Q96GT9 111 aa11□□□□□ -0.65
UBE2D1-202ENST00000473824 ETNK1Q9HBU6 452 aa11□□□□□ -0.65
UBE2D1-202ENST00000473824 PCDHGA11Q9Y5H2 935 aa11□□□□□ -0.65
UBE2D1-202ENST00000473824 GDF10P55107 478 aa10.99□□□□□ -0.65
UBE2D1-202ENST00000473824 NXF1Q9UBU9 619 aaKnown RBP10.99□□□□□ -0.65
UBE2D1-202ENST00000473824 MKRN1Q9UHC7 482 aaKnown RBP10.99□□□□□ -0.65
UBE2D1-202ENST00000473824 WASLO00401 505 aaPredicted RBP10.98□□□□□ -0.65
UBE2D1-202ENST00000473824 INHAP05111 366 aa10.98□□□□□ -0.65
UBE2D1-202ENST00000473824 GTF2E1P29083 439 aaPredicted RBP10.98□□□□□ -0.65
UBE2D1-202ENST00000473824 SCNN1DP51172 638 aa10.98□□□□□ -0.65
UBE2D1-202ENST00000473824 ZNF775Q96BV0 537 aaPredicted RBP10.98□□□□□ -0.65
UBE2D1-202ENST00000473824 LMOD1P29536 600 aaPredicted RBP10.97□□□□□ -0.65
UBE2D1-202ENST00000473824 CENPCQ03188 943 aa10.97□□□□□ -0.65
UBE2D1-202ENST00000473824 PRICKLE2Q7Z3G6 844 aa10.97□□□□□ -0.65
UBE2D1-202ENST00000473824 NPAS3Q8IXF0 933 aa10.97□□□□□ -0.65
UBE2D1-202ENST00000473824 GRIP2Q9C0E4 1043 aa10.97□□□□□ -0.65
UBE2D1-202ENST00000473824 STAU1O95793 577 aaKnown RBP10.96□□□□□ -0.65
UBE2D1-202ENST00000473824 PTSQ03393 145 aa10.96□□□□□ -0.65
UBE2D1-202ENST00000473824 CCDC97Q96F63 343 aaPredicted RBP10.96□□□□□ -0.65
UBE2D1-202ENST00000473824 ZSCAN10Q96SZ4 725 aaPredicted RBP10.96□□□□□ -0.65
UBE2D1-202ENST00000473824 HRH3Q9Y5N1 445 aa10.96□□□□□ -0.65
UBE2D1-202ENST00000473824 TERTO14746 1132 aaKnown RBP10.95□□□□□ -0.66
UBE2D1-202ENST00000473824 TLR1Q15399 786 aa10.95□□□□□ -0.66
UBE2D1-202ENST00000473824 OGFOD1Q8N543 542 aa10.95□□□□□ -0.66
UBE2D1-202ENST00000473824 DNAAF2Q9NVR5 837 aaKnown RBP10.95□□□□□ -0.66
UBE2D1-202ENST00000473824 TMEM229AB2RXF0 380 aa10.94□□□□□ -0.66
UBE2D1-202ENST00000473824 BACH1O14867 736 aa10.94□□□□□ -0.66
UBE2D1-202ENST00000473824 LARGE2Q8N3Y3 721 aa10.94□□□□□ -0.66
UBE2D1-202ENST00000473824 SLC16A10Q8TF71 515 aa10.94□□□□□ -0.66
UBE2D1-202ENST00000473824 RBM19Q9Y4C8 960 aaKnown RBP10.94□□□□□ -0.66
UBE2D1-202ENST00000473824 ARID3CA6NKF2 412 aa10.93□□□□□ -0.66
UBE2D1-202ENST00000473824 SPATA31C2B4DYI2 1134 aa10.93□□□□□ -0.66
UBE2D1-202ENST00000473824 RASA1P20936 1047 aa10.93□□□□□ -0.66
UBE2D1-202ENST00000473824 CLDN10P78369 228 aa10.93□□□□□ -0.66
UBE2D1-202ENST00000473824 CFAP70Q5T0N1 1121 aa10.93□□□□□ -0.66
UBE2D1-202ENST00000473824 TMEM214Q6NUQ4 689 aaKnown RBP10.93□□□□□ -0.66
UBE2D1-202ENST00000473824 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms