RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 MAN1A2O60476 641 aa9.13□□□□□ -0.95
CNOT4-209ENST00000473470 SKIP12755 728 aa9.13□□□□□ -0.95
CNOT4-209ENST00000473470 SCTRP47872 440 aa9.13□□□□□ -0.95
CNOT4-209ENST00000473470 AGBL1Q96MI9 1066 aa9.13□□□□□ -0.95
CNOT4-209ENST00000473470 OSBPL3Q9H4L5 887 aa9.13□□□□□ -0.95
CNOT4-209ENST00000473470 POLMQ9NP87 494 aaPredicted RBP9.13□□□□□ -0.95
CNOT4-209ENST00000473470 USP17L5A8MUK1 530 aa9.12□□□□□ -0.95
CNOT4-209ENST00000473470 GNRH1P01148 92 aa9.12□□□□□ -0.95
CNOT4-209ENST00000473470 GPC1P35052 558 aa9.12□□□□□ -0.95
CNOT4-209ENST00000473470 ADAMTS19Q8TE59 1207 aa9.12□□□□□ -0.95
CNOT4-209ENST00000473470 CALR3Q96L12 384 aaKnown RBP9.12□□□□□ -0.95
CNOT4-209ENST00000473470 SNRPBP14678 240 aaKnown RBP9.11□□□□□ -0.95
CNOT4-209ENST00000473470 ADD1P35611 737 aaKnown RBP9.11□□□□□ -0.95
CNOT4-209ENST00000473470 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.11□□□□□ -0.95
CNOT4-209ENST00000473470 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
CNOT4-209ENST00000473470 HDGFL1Q5TGJ6 251 aa9.11□□□□□ -0.95
CNOT4-209ENST00000473470 PLEKHM2Q8IWE5 1019 aa9.11□□□□□ -0.95
CNOT4-209ENST00000473470 POTECB2RU33 542 aa9.1□□□□□ -0.95
CNOT4-209ENST00000473470 PIK3CDO00329 1044 aa9.1□□□□□ -0.95
CNOT4-209ENST00000473470 ATP9BO43861 1147 aa9.1□□□□□ -0.95
CNOT4-209ENST00000473470 CLN3Q13286 438 aa9.1□□□□□ -0.95
CNOT4-209ENST00000473470 TRIM50Q86XT4 487 aa9.09□□□□□ -0.95
CNOT4-209ENST00000473470 NLRP3Q96P20 1036 aa9.09□□□□□ -0.95
CNOT4-209ENST00000473470 UCN2Q96RP3 112 aa9.09□□□□□ -0.95
CNOT4-209ENST00000473470 INSM2Q96T92 566 aaPredicted RBP9.09□□□□□ -0.95
CNOT4-209ENST00000473470 CDCA7Q9BWT1 371 aaPredicted RBP9.09□□□□□ -0.95
CNOT4-209ENST00000473470 ZMYND15Q9H091 742 aa9.09□□□□□ -0.95
CNOT4-209ENST00000473470 ARHGEF10LQ9HCE6 1279 aa9.09□□□□□ -0.95
CNOT4-209ENST00000473470 NOD1Q9Y239 953 aa9.09□□□□□ -0.95
CNOT4-209ENST00000473470 USP17L3A6NCW0 530 aa9.08□□□□□ -0.96
CNOT4-209ENST00000473470 USP17L4A6NCW7 530 aa9.08□□□□□ -0.96
CNOT4-209ENST00000473470 NCOA4Q13772 614 aa9.08□□□□□ -0.96
CNOT4-209ENST00000473470 USP17L2Q6R6M4 530 aa9.08□□□□□ -0.96
CNOT4-209ENST00000473470 USP17L1Q7RTZ2 530 aa9.08□□□□□ -0.96
CNOT4-209ENST00000473470 NPAS3Q8IXF0 933 aa9.08□□□□□ -0.96
CNOT4-209ENST00000473470 RNF217Q8TC41 542 aa9.08□□□□□ -0.96
CNOT4-209ENST00000473470 ZNF395Q9H8N7 513 aaPredicted RBP9.08□□□□□ -0.96
CNOT4-209ENST00000473470 DNMT3LQ9UJW3 386 aa9.08□□□□□ -0.96
CNOT4-209ENST00000473470 MEN1O00255 615 aa9.07□□□□□ -0.96
CNOT4-209ENST00000473470 KDF1Q8NAX2 398 aaPredicted RBP9.07□□□□□ -0.96
CNOT4-209ENST00000473470 A0A1W2PRU2 124 aa9.06□□□□□ -0.96
CNOT4-209ENST00000473470 WASLO00401 505 aaPredicted RBP9.06□□□□□ -0.96
CNOT4-209ENST00000473470 CTSOP43234 321 aaPredicted RBP9.06□□□□□ -0.96
CNOT4-209ENST00000473470 RNF144AP50876 292 aaPredicted RBP9.06□□□□□ -0.96
CNOT4-209ENST00000473470 ATP1A2P50993 1020 aa9.06□□□□□ -0.96
CNOT4-209ENST00000473470 FOXD4L5Q5VV16 416 aaPredicted RBP9.06□□□□□ -0.96
CNOT4-209ENST00000473470 C14orf37Q86TY3 774 aa9.06□□□□□ -0.96
CNOT4-209ENST00000473470 GTF2E1P29083 439 aaPredicted RBP9.05□□□□□ -0.96
CNOT4-209ENST00000473470 ESYT1Q9BSJ8 1104 aa9.05□□□□□ -0.96
CNOT4-209ENST00000473470 GTF2IP78347 998 aa9.04□□□□□ -0.96
CNOT4-209ENST00000473470 SLC27A3Q5K4L6 730 aa9.04□□□□□ -0.96
CNOT4-209ENST00000473470 LYSMD3Q7Z3D4 306 aa9.04□□□□□ -0.96
CNOT4-209ENST00000473470 PSME1Q06323 249 aa9.03□□□□□ -0.96
CNOT4-209ENST00000473470 TBC1D9Q6ZT07 1266 aa9.03□□□□□ -0.96
CNOT4-209ENST00000473470 CNKSR1Q969H4 720 aa9.03□□□□□ -0.96
CNOT4-209ENST00000473470 RAB6BQ9NRW1 208 aa9.03□□□□□ -0.96
CNOT4-209ENST00000473470 NXF1Q9UBU9 619 aaKnown RBP9.03□□□□□ -0.96
CNOT4-209ENST00000473470 MAFBQ9Y5Q3 323 aaPredicted RBP9.03□□□□□ -0.96
CNOT4-209ENST00000473470 GDF10P55107 478 aa9.02□□□□□ -0.97
CNOT4-209ENST00000473470 TSGA10IPQ3SY00 556 aa9.02□□□□□ -0.97
CNOT4-209ENST00000473470 NBPF15Q8N660 670 aa9.02□□□□□ -0.97
CNOT4-209ENST00000473470 SLC16A10Q8TF71 515 aa9.02□□□□□ -0.97
CNOT4-209ENST00000473470 PPP1R12CQ9BZL4 782 aa9.02□□□□□ -0.97
CNOT4-209ENST00000473470 PALM3A6NDB9 673 aaPredicted RBP9.01□□□□□ -0.97
CNOT4-209ENST00000473470 SOBPA7XYQ1 873 aa9.01□□□□□ -0.97
CNOT4-209ENST00000473470 IL2RAP01589 272 aa9.01□□□□□ -0.97
CNOT4-209ENST00000473470 TLR1Q15399 786 aa9.01□□□□□ -0.97
CNOT4-209ENST00000473470 ETNK1Q9HBU6 452 aa9.01□□□□□ -0.97
CNOT4-209ENST00000473470 TERTO14746 1132 aaKnown RBP9□□□□□ -0.97
CNOT4-209ENST00000473470 SCNN1DP51172 638 aa9□□□□□ -0.97
CNOT4-209ENST00000473470 GNASQ5JWF2 1037 aa9□□□□□ -0.97
CNOT4-209ENST00000473470 DEPDC4Q8N2C3 294 aa9□□□□□ -0.97
CNOT4-209ENST00000473470 ZNF775Q96BV0 537 aaPredicted RBP9□□□□□ -0.97
CNOT4-209ENST00000473470 XAGE2Q96GT9 111 aa9□□□□□ -0.97
CNOT4-209ENST00000473470 ZNF777Q9ULD5 760 aaPredicted RBP9□□□□□ -0.97
CNOT4-209ENST00000473470 FIGNL2A6NMB9 653 aa8.99□□□□□ -0.97
CNOT4-209ENST00000473470 SPATA31C2B4DYI2 1134 aa8.99□□□□□ -0.97
CNOT4-209ENST00000473470 BACH1O14867 736 aa8.99□□□□□ -0.97
CNOT4-209ENST00000473470 INHAP05111 366 aa8.99□□□□□ -0.97
CNOT4-209ENST00000473470 PTSQ03393 145 aa8.99□□□□□ -0.97
CNOT4-209ENST00000473470 WDR44Q5JSH3 913 aa8.99□□□□□ -0.97
CNOT4-209ENST00000473470 CCDC97Q96F63 343 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-209ENST00000473470 ZSCAN10Q96SZ4 725 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-209ENST00000473470 RBM19Q9Y4C8 960 aaKnown RBP8.99□□□□□ -0.97
CNOT4-209ENST00000473470 H3BM21 787 aa8.98□□□□□ -0.97
CNOT4-209ENST00000473470 TAS1R3Q7RTX0 852 aa8.98□□□□□ -0.97
CNOT4-209ENST00000473470 GRIP2Q9C0E4 1043 aa8.98□□□□□ -0.97
CNOT4-209ENST00000473470 TFIP11Q9UBB9 837 aaKnown RBP8.98□□□□□ -0.97
CNOT4-209ENST00000473470 HRH3Q9Y5N1 445 aa8.98□□□□□ -0.97
CNOT4-209ENST00000473470 LARGE2Q8N3Y3 721 aa8.97□□□□□ -0.97
CNOT4-209ENST00000473470 FHDC1Q9C0D6 1143 aaPredicted RBP8.97□□□□□ -0.97
CNOT4-209ENST00000473470 DNAAF2Q9NVR5 837 aaKnown RBP8.97□□□□□ -0.97
CNOT4-209ENST00000473470 MKRN1Q9UHC7 482 aaKnown RBP8.97□□□□□ -0.97
CNOT4-209ENST00000473470 PCDHGA11Q9Y5H2 935 aa8.97□□□□□ -0.97
CNOT4-209ENST00000473470 TMEM214Q6NUQ4 689 aaKnown RBP8.96□□□□□ -0.98
CNOT4-209ENST00000473470 SIX5Q8N196 739 aa8.96□□□□□ -0.98
CNOT4-209ENST00000473470 OGFOD1Q8N543 542 aa8.96□□□□□ -0.98
CNOT4-209ENST00000473470 RHBDD1Q8TEB9 315 aa8.96□□□□□ -0.98
CNOT4-209ENST00000473470 IRF7Q92985 503 aa8.96□□□□□ -0.98
CNOT4-209ENST00000473470 SLC35F4A4IF30 521 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms