RNA–Protein interactions for RNA: ENST00000473222.1

NR1H3-218, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-218ENST00000473222 MEGF6O75095 1541 aa23.68■■□□□ 1.38
NR1H3-218ENST00000473222 BRWD3Q6RI45 1802 aa23.68■■□□□ 1.38
NR1H3-218ENST00000473222 PLEKHG2Q9H7P9 1386 aa23.67■■□□□ 1.38
NR1H3-218ENST00000473222 OVOS2A0A0G2JMS6 1433 aa23.67■■□□□ 1.38
NR1H3-218ENST00000473222 PDE3BQ13370 1112 aa23.66■■□□□ 1.38
NR1H3-218ENST00000473222 RSPH6AQ9H0K4 717 aa23.66■■□□□ 1.38
NR1H3-218ENST00000473222 MRS2Q9HD23 443 aa23.66■■□□□ 1.38
NR1H3-218ENST00000473222 CCER2I3L3R5 266 aa23.65■■□□□ 1.38
NR1H3-218ENST00000473222 KRT27Q7Z3Y8 459 aa23.65■■□□□ 1.38
NR1H3-218ENST00000473222 MIER1Q8N108 512 aa23.65■■□□□ 1.38
NR1H3-218ENST00000473222 PNISRQ8TF01 805 aaKnown RBP23.65■■□□□ 1.38
NR1H3-218ENST00000473222 AMOTQ4VCS5 1084 aa23.64■■□□□ 1.37
NR1H3-218ENST00000473222 PLEKHO1Q53GL0 409 aaPredicted RBP23.64■■□□□ 1.37
NR1H3-218ENST00000473222 SPG7Q9UQ90 795 aa23.64■■□□□ 1.37
NR1H3-218ENST00000473222 WDR43Q15061 677 aaKnown RBP eCLIP23.63■■□□□ 1.37
NR1H3-218ENST00000473222 ADAMTS8Q9UP79 889 aa23.63■■□□□ 1.37
NR1H3-218ENST00000473222 ILDR2Q71H61 639 aa23.62■■□□□ 1.37
NR1H3-218ENST00000473222 MARCH10Q8NA82 808 aaPredicted RBP23.62■■□□□ 1.37
NR1H3-218ENST00000473222 PNNQ9H307 717 aaKnown RBP23.62■■□□□ 1.37
NR1H3-218ENST00000473222 PRKAR2BP31323 418 aa23.61■■□□□ 1.37
NR1H3-218ENST00000473222 LRRC37A3O60309 1634 aa23.61■■□□□ 1.37
NR1H3-218ENST00000473222 TNS2Q63HR2 1409 aa23.6■■□□□ 1.37
NR1H3-218ENST00000473222 DDX54Q8TDD1 881 aaKnown RBP23.6■■□□□ 1.37
NR1H3-218ENST00000473222 PLEKHF1Q96S99 279 aa23.6■■□□□ 1.37
NR1H3-218ENST00000473222 PHACTR3Q96KR7 559 aa23.59■■□□□ 1.37
NR1H3-218ENST00000473222 PKD1L3Q7Z443 1732 aa23.59■■□□□ 1.37
NR1H3-218ENST00000473222 KAT6BQ8WYB5 2073 aa23.58■■□□□ 1.37
NR1H3-218ENST00000473222 CYP27B1O15528 508 aa23.58■■□□□ 1.37
NR1H3-218ENST00000473222 PCDH11XQ9BZA7 1347 aa23.57■■□□□ 1.36
NR1H3-218ENST00000473222 PCDH11YQ9BZA8 1340 aa23.57■■□□□ 1.36
NR1H3-218ENST00000473222 SHANK3Q9BYB0 1731 aa23.56■■□□□ 1.36
NR1H3-218ENST00000473222 NKX1-1Q15270 411 aaPredicted RBP23.56■■□□□ 1.36
NR1H3-218ENST00000473222 MTHFSDQ2M296 383 aaKnown RBP23.56■■□□□ 1.36
NR1H3-218ENST00000473222 FAM196AQ6ZSG2 479 aa23.56■■□□□ 1.36
NR1H3-218ENST00000473222 IFNL2Q8IZJ0 200 aa23.56■■□□□ 1.36
NR1H3-218ENST00000473222 FAM182BQ5T319 152 aa23.55■■□□□ 1.36
NR1H3-218ENST00000473222 BCL9O00512 1426 aa23.54■■□□□ 1.36
NR1H3-218ENST00000473222 PHKG2P15735 406 aa23.54■■□□□ 1.36
NR1H3-218ENST00000473222 ZNF530Q6P9A1 599 aaPredicted RBP23.54■■□□□ 1.36
NR1H3-218ENST00000473222 NEFMP07197 916 aa23.53■■□□□ 1.36
NR1H3-218ENST00000473222 GAS2L2Q8NHY3 880 aa23.53■■□□□ 1.36
NR1H3-218ENST00000473222 AKAP4Q5JQC9 854 aa23.52■■□□□ 1.36
NR1H3-218ENST00000473222 RUNDC1Q96C34 613 aa23.52■■□□□ 1.36
NR1H3-218ENST00000473222 HSP90AB1P08238 724 aaKnown RBP23.5■■□□□ 1.35
NR1H3-218ENST00000473222 C1orf141Q5JVX7 400 aa23.5■■□□□ 1.35
NR1H3-218ENST00000473222 CCDC146Q8IYE0 955 aa23.48■■□□□ 1.35
NR1H3-218ENST00000473222 FAM9BQ8IZU0 186 aa23.48■■□□□ 1.35
NR1H3-218ENST00000473222 MAPK8IP3Q9UPT6 1336 aa23.48■■□□□ 1.35
NR1H3-218ENST00000473222 SBF2Q86WG5 1849 aa23.47■■□□□ 1.35
NR1H3-218ENST00000473222 NFE2L2Q16236 605 aa23.47■■□□□ 1.35
NR1H3-218ENST00000473222 DCAF5Q96JK2 942 aa23.47■■□□□ 1.35
NR1H3-218ENST00000473222 GNAT3A8MTJ3 354 aa23.46■■□□□ 1.35
NR1H3-218ENST00000473222 HTATSF1O43719 755 aaKnown RBP23.45■■□□□ 1.34
NR1H3-218ENST00000473222 TMPOP42166 694 aaKnown RBP23.45■■□□□ 1.34
NR1H3-218ENST00000473222 EP400Q96L91 3159 aa23.44■■□□□ 1.34
NR1H3-218ENST00000473222 MPRIPQ6WCQ1 1025 aa23.44■■□□□ 1.34
NR1H3-218ENST00000473222 ERVV-2B6SEH9 535 aa23.43■■□□□ 1.34
NR1H3-218ENST00000473222 PRIM1P49642 420 aaKnown RBP23.43■■□□□ 1.34
NR1H3-218ENST00000473222 LGR6Q9HBX8 967 aa23.43■■□□□ 1.34
NR1H3-218ENST00000473222 DLG5Q8TDM6 1919 aa23.43■■□□□ 1.34
NR1H3-218ENST00000473222 RNMTO43148 476 aaKnown RBP23.42■■□□□ 1.34
NR1H3-218ENST00000473222 KCNQ2O43526 872 aa23.42■■□□□ 1.34
NR1H3-218ENST00000473222 IL17REQ8NFR9 667 aa23.42■■□□□ 1.34
NR1H3-218ENST00000473222 ACSBG1Q96GR2 724 aa23.42■■□□□ 1.34
NR1H3-218ENST00000473222 BCL11BQ9C0K0 894 aaPredicted RBP23.42■■□□□ 1.34
NR1H3-218ENST00000473222 MAP3K5Q99683 1374 aa23.41■■□□□ 1.34
NR1H3-218ENST00000473222 APAF1O14727 1248 aa23.41■■□□□ 1.34
NR1H3-218ENST00000473222 TRIM37O94972 964 aa23.41■■□□□ 1.34
NR1H3-218ENST00000473222 RIPK4P57078 832 aa23.41■■□□□ 1.34
NR1H3-218ENST00000473222 CCDC125Q86Z20 511 aa23.41■■□□□ 1.34
NR1H3-218ENST00000473222 SCN11AQ9UI33 1791 aa23.4■■□□□ 1.34
NR1H3-218ENST00000473222 VIRMAQ69YN4 1812 aaKnown RBP23.4■■□□□ 1.34
NR1H3-218ENST00000473222 PTF1AQ7RTS3 328 aa23.39■■□□□ 1.33
NR1H3-218ENST00000473222 RTF1Q92541 710 aaKnown RBP23.39■■□□□ 1.33
NR1H3-218ENST00000473222 KDM6AO15550 1401 aaPredicted RBP23.39■■□□□ 1.33
NR1H3-218ENST00000473222 ITGB4P16144 1822 aa23.38■■□□□ 1.33
NR1H3-218ENST00000473222 NCBP3Q53F19 620 aaKnown RBP23.38■■□□□ 1.33
NR1H3-218ENST00000473222 UPF1Q92900 1129 aaKnown RBP eCLIP23.38■■□□□ 1.33
NR1H3-218ENST00000473222 ADAMTS7Q9UKP4 1686 aa23.38■■□□□ 1.33
NR1H3-218ENST00000473222 TOGARAM1Q9Y4F4 1720 aa23.36■■□□□ 1.33
NR1H3-218ENST00000473222 NEUROD2Q15784 382 aa23.36■■□□□ 1.33
NR1H3-218ENST00000473222 NFATC2IPQ8NCF5 419 aa23.36■■□□□ 1.33
NR1H3-218ENST00000473222 PIGBQ92521 554 aa23.36■■□□□ 1.33
NR1H3-218ENST00000473222 TRIM35Q9UPQ4 493 aa23.36■■□□□ 1.33
NR1H3-218ENST00000473222 RRP7AQ9Y3A4 280 aaKnown RBP23.36■■□□□ 1.33
NR1H3-218ENST00000473222 CEMIPQ8WUJ3 1361 aa23.36■■□□□ 1.33
NR1H3-218ENST00000473222 DOT1LQ8TEK3 1739 aa23.36■■□□□ 1.33
NR1H3-218ENST00000473222 CABP4P57796 275 aa23.35■■□□□ 1.33
NR1H3-218ENST00000473222 SYTL4Q96C24 671 aaPredicted RBP23.35■■□□□ 1.33
NR1H3-218ENST00000473222 SLC52A2Q9HAB3 445 aa23.35■■□□□ 1.33
NR1H3-218ENST00000473222 NHSQ6T4R5 1651 aa23.35■■□□□ 1.33
NR1H3-218ENST00000473222 LMOD3Q0VAK6 560 aa23.34■■□□□ 1.33
NR1H3-218ENST00000473222 DCTN1Q14203 1278 aa23.34■■□□□ 1.33
NR1H3-218ENST00000473222 MCM10Q7L590 875 aa23.34■■□□□ 1.33
NR1H3-218ENST00000473222 TMOD3Q9NYL9 352 aa23.34■■□□□ 1.33
NR1H3-218ENST00000473222 APBA3O96018 575 aa23.32■■□□□ 1.32
NR1H3-218ENST00000473222 NGEFQ8N5V2 710 aa23.32■■□□□ 1.32
NR1H3-218ENST00000473222 PLSCR1O15162 318 aa23.31■■□□□ 1.32
NR1H3-218ENST00000473222 TEFQ10587 303 aa23.31■■□□□ 1.32
NR1H3-218ENST00000473222 SF3B2Q13435 895 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms