RNA–Protein interactions for RNA: ENST00000473195.5

TRAIP-203, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-203ENST00000473195 LY75O60449 1722 aa16.84■□□□□ 0.29
TRAIP-203ENST00000473195 HSP90AB2PQ58FF8 381 aa16.84■□□□□ 0.29
TRAIP-203ENST00000473195 ITGB4P16144 1822 aa16.82■□□□□ 0.28
TRAIP-203ENST00000473195 SPON1Q9HCB6 807 aa16.82■□□□□ 0.28
TRAIP-203ENST00000473195 EMILIN1Q9Y6C2 1016 aa16.82■□□□□ 0.28
TRAIP-203ENST00000473195 ZBTB7AO95365 584 aa16.81■□□□□ 0.28
TRAIP-203ENST00000473195 HSPA5P11021 654 aaKnown RBP16.81■□□□□ 0.28
TRAIP-203ENST00000473195 SYTL4Q96C24 671 aaPredicted RBP16.81■□□□□ 0.28
TRAIP-203ENST00000473195 STK32BQ9NY57 414 aa16.81■□□□□ 0.28
TRAIP-203ENST00000473195 TOGARAM1Q9Y4F4 1720 aa16.81■□□□□ 0.28
TRAIP-203ENST00000473195 SMG6Q86US8 1419 aaKnown RBP16.8■□□□□ 0.28
TRAIP-203ENST00000473195 SLC15A2Q16348 729 aa16.8■□□□□ 0.28
TRAIP-203ENST00000473195 ZCRB1Q8TBF4 217 aaKnown RBP16.8■□□□□ 0.28
TRAIP-203ENST00000473195 PPP1R1BQ9UD71 204 aaPredicted RBP16.8■□□□□ 0.28
TRAIP-203ENST00000473195 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
TRAIP-203ENST00000473195 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
TRAIP-203ENST00000473195 INSRP06213 1382 aa16.79■□□□□ 0.28
TRAIP-203ENST00000473195 FLT4P35916 1363 aa16.79■□□□□ 0.28
TRAIP-203ENST00000473195 PPM1GO15355 546 aaPredicted RBP16.79■□□□□ 0.28
TRAIP-203ENST00000473195 KCNQ4P56696 695 aa16.79■□□□□ 0.28
TRAIP-203ENST00000473195 LRRC4BQ9NT99 713 aa16.79■□□□□ 0.28
TRAIP-203ENST00000473195 ATF5Q9Y2D1 282 aaPredicted RBP16.79■□□□□ 0.28
TRAIP-203ENST00000473195 NSD2O96028 1365 aa16.78■□□□□ 0.28
TRAIP-203ENST00000473195 PRIM1P49642 420 aaKnown RBP16.78■□□□□ 0.28
TRAIP-203ENST00000473195 EIF4G2P78344 907 aaKnown RBP eCLIP16.77■□□□□ 0.28
TRAIP-203ENST00000473195 ZNF827Q17R98 1081 aa16.77■□□□□ 0.28
TRAIP-203ENST00000473195 TAF1LQ8IZX4 1826 aa16.77■□□□□ 0.27
TRAIP-203ENST00000473195 RAPGEF4Q8WZA2 1011 aa16.76■□□□□ 0.27
TRAIP-203ENST00000473195 TATP17735 454 aaPredicted RBP16.75■□□□□ 0.27
TRAIP-203ENST00000473195 TNNT2P45379 298 aaPredicted RBP16.75■□□□□ 0.27
TRAIP-203ENST00000473195 C5P01031 1676 aa16.75■□□□□ 0.27
TRAIP-203ENST00000473195 CGNL1Q0VF96 1302 aa16.74■□□□□ 0.27
TRAIP-203ENST00000473195 KIF24Q5T7B8 1368 aa16.74■□□□□ 0.27
TRAIP-203ENST00000473195 CEP350Q5VT06 3117 aa16.73■□□□□ 0.27
TRAIP-203ENST00000473195 SENP3-EIF4A1A0A087X0R7 540 aa16.73■□□□□ 0.27
TRAIP-203ENST00000473195 PTGER2P43116 358 aa16.73■□□□□ 0.27
TRAIP-203ENST00000473195 PANK3Q9H999 370 aa16.72■□□□□ 0.27
TRAIP-203ENST00000473195 COL24A1Q17RW2 1714 aa16.71■□□□□ 0.27
TRAIP-203ENST00000473195 POLKQ9UBT6 870 aa16.71■□□□□ 0.27
TRAIP-203ENST00000473195 CYP27B1O15528 508 aa16.7■□□□□ 0.26
TRAIP-203ENST00000473195 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
TRAIP-203ENST00000473195 NCAPD2Q15021 1401 aa16.7■□□□□ 0.26
TRAIP-203ENST00000473195 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
TRAIP-203ENST00000473195 PCDH11XQ9BZA7 1347 aa16.7■□□□□ 0.26
TRAIP-203ENST00000473195 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
TRAIP-203ENST00000473195 EYA1Q99502 592 aa16.69■□□□□ 0.26
TRAIP-203ENST00000473195 SLC27A3Q5K4L6 730 aa16.68■□□□□ 0.26
TRAIP-203ENST00000473195 MTFR1LQ9H019 292 aa16.68■□□□□ 0.26
TRAIP-203ENST00000473195 PNPLA7Q6ZV29 1317 aa16.68■□□□□ 0.26
TRAIP-203ENST00000473195 MPRIPQ6WCQ1 1025 aa16.67■□□□□ 0.26
TRAIP-203ENST00000473195 SGIP1Q9BQI5 828 aa16.67■□□□□ 0.26
TRAIP-203ENST00000473195 CCNL1Q9UK58 526 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-203ENST00000473195 VIRMAQ69YN4 1812 aaKnown RBP16.66■□□□□ 0.26
TRAIP-203ENST00000473195 EIF4A2Q14240 407 aaKnown RBP16.66■□□□□ 0.26
TRAIP-203ENST00000473195 FHDC1Q9C0D6 1143 aaPredicted RBP16.66■□□□□ 0.26
TRAIP-203ENST00000473195 UTRNP46939 3433 aa16.65■□□□□ 0.26
TRAIP-203ENST00000473195 TFCP2L1Q9NZI6 479 aa16.65■□□□□ 0.26
TRAIP-203ENST00000473195 UBR3Q6ZT12 1888 aa16.65■□□□□ 0.26
TRAIP-203ENST00000473195 C4BP0C0L5 1744 aa16.65■□□□□ 0.26
TRAIP-203ENST00000473195 CHD4Q14839 1912 aa16.64■□□□□ 0.26
TRAIP-203ENST00000473195 SYT17Q9BSW7 474 aa16.63■□□□□ 0.25
TRAIP-203ENST00000473195 PALLDQ8WX93 1383 aa16.63■□□□□ 0.25
TRAIP-203ENST00000473195 ARXQ96QS3 562 aa16.62■□□□□ 0.25
TRAIP-203ENST00000473195 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
TRAIP-203ENST00000473195 MSH5O43196 834 aa16.61■□□□□ 0.25
TRAIP-203ENST00000473195 MORC1Q86VD1 984 aa16.61■□□□□ 0.25
TRAIP-203ENST00000473195 KLHL34Q8N239 644 aa16.61■□□□□ 0.25
TRAIP-203ENST00000473195 KIF7Q2M1P5 1343 aa16.61■□□□□ 0.25
TRAIP-203ENST00000473195 SMIM5Q71RC9 77 aa16.6■□□□□ 0.25
TRAIP-203ENST00000473195 COL23A1Q86Y22 540 aaPredicted RBP16.6■□□□□ 0.25
TRAIP-203ENST00000473195 PIGBQ92521 554 aa16.6■□□□□ 0.25
TRAIP-203ENST00000473195 PHKG2P15735 406 aa16.59■□□□□ 0.25
TRAIP-203ENST00000473195 IGSF1Q8N6C5 1336 aa16.59■□□□□ 0.25
TRAIP-203ENST00000473195 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.25
TRAIP-203ENST00000473195 DCAF8L1A6NGE4 600 aa16.58■□□□□ 0.24
TRAIP-203ENST00000473195 NKX1-1Q15270 411 aaPredicted RBP16.58■□□□□ 0.24
TRAIP-203ENST00000473195 MSL1Q68DK7 614 aa16.58■□□□□ 0.24
TRAIP-203ENST00000473195 AMIGO3Q86WK7 504 aa16.57■□□□□ 0.24
TRAIP-203ENST00000473195 AEBP1Q8IUX7 1158 aa16.57■□□□□ 0.24
TRAIP-203ENST00000473195 IFNL2Q8IZJ0 200 aa16.57■□□□□ 0.24
TRAIP-203ENST00000473195 SLC16A10Q8TF71 515 aa16.57■□□□□ 0.24
TRAIP-203ENST00000473195 KNSTRNQ9Y448 316 aa16.57■□□□□ 0.24
TRAIP-203ENST00000473195 SCN11AQ9UI33 1791 aa16.56■□□□□ 0.24
TRAIP-203ENST00000473195 CNGB1Q14028 1251 aaPredicted RBP16.56■□□□□ 0.24
TRAIP-203ENST00000473195 ASAP1Q9ULH1 1129 aa16.56■□□□□ 0.24
TRAIP-203ENST00000473195 COL5A3P25940 1745 aaPredicted RBP16.56■□□□□ 0.24
TRAIP-203ENST00000473195 POLD1P28340 1107 aa16.55■□□□□ 0.24
TRAIP-203ENST00000473195 AMER1Q5JTC6 1135 aaPredicted RBP16.55■□□□□ 0.24
TRAIP-203ENST00000473195 ZNF784Q8NCA9 323 aaPredicted RBP16.55■□□□□ 0.24
TRAIP-203ENST00000473195 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.55■□□□□ 0.24
TRAIP-203ENST00000473195 TMOD3Q9NYL9 352 aa16.55■□□□□ 0.24
TRAIP-203ENST00000473195 SMARCC1Q92922 1105 aaPredicted RBP16.54■□□□□ 0.24
TRAIP-203ENST00000473195 PHF14O94880 888 aa16.53■□□□□ 0.24
TRAIP-203ENST00000473195 C1QTNF8P60827 252 aa16.53■□□□□ 0.24
TRAIP-203ENST00000473195 LINC00116Q8NCU8 138 aa16.53■□□□□ 0.24
TRAIP-203ENST00000473195 NLGN2Q8NFZ4 835 aa16.53■□□□□ 0.24
TRAIP-203ENST00000473195 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
TRAIP-203ENST00000473195 MYH14Q7Z406 1995 aaKnown RBP16.52■□□□□ 0.24
TRAIP-203ENST00000473195 LOC102724428A0A0B4J2F2 783 aa16.52■□□□□ 0.24
TRAIP-203ENST00000473195 SIK1P57059 783 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms