RNA–Protein interactions for RNA: ENST00000472911.1

SMTN-215, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-215ENST00000472911 PDGFDQ9GZP0 370 aaPredicted RBP16.45■□□□□ 0.22
SMTN-215ENST00000472911 ANO8Q9HCE9 1232 aaPredicted RBP16.45■□□□□ 0.22
SMTN-215ENST00000472911 CHD4Q14839 1912 aa16.45■□□□□ 0.22
SMTN-215ENST00000472911 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
SMTN-215ENST00000472911 RGPD3A6NKT7 1758 aaPredicted RBP16.43■□□□□ 0.22
SMTN-215ENST00000472911 RGPD4Q7Z3J3 1758 aa16.43■□□□□ 0.22
SMTN-215ENST00000472911 NBPF6Q5VWK0 638 aa16.42■□□□□ 0.22
SMTN-215ENST00000472911 NBPF4Q96M43 638 aa16.42■□□□□ 0.22
SMTN-215ENST00000472911 SHANK3Q9BYB0 1731 aa16.42■□□□□ 0.22
SMTN-215ENST00000472911 SBF2Q86WG5 1849 aa16.41■□□□□ 0.22
SMTN-215ENST00000472911 ZBTB7AO95365 584 aa16.41■□□□□ 0.22
SMTN-215ENST00000472911 PTGER2P43116 358 aa16.41■□□□□ 0.22
SMTN-215ENST00000472911 USHBP1Q8N6Y0 703 aa16.41■□□□□ 0.22
SMTN-215ENST00000472911 CDCA7Q9BWT1 371 aaPredicted RBP16.41■□□□□ 0.22
SMTN-215ENST00000472911 NCAPD2Q15021 1401 aa16.4■□□□□ 0.22
SMTN-215ENST00000472911 PLSCR1O15162 318 aa16.4■□□□□ 0.22
SMTN-215ENST00000472911 EIF4A2Q14240 407 aaKnown RBP16.4■□□□□ 0.22
SMTN-215ENST00000472911 MEGF6O75095 1541 aa16.4■□□□□ 0.22
SMTN-215ENST00000472911 TNS2Q63HR2 1409 aa16.39■□□□□ 0.21
SMTN-215ENST00000472911 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
SMTN-215ENST00000472911 IL2RBP14784 551 aa16.39■□□□□ 0.21
SMTN-215ENST00000472911 MTHFSP49914 203 aa16.39■□□□□ 0.21
SMTN-215ENST00000472911 DDB1Q16531 1140 aa16.38■□□□□ 0.21
SMTN-215ENST00000472911 PTF1AQ7RTS3 328 aa16.38■□□□□ 0.21
SMTN-215ENST00000472911 SYT17Q9BSW7 474 aa16.38■□□□□ 0.21
SMTN-215ENST00000472911 ATF5Q9Y2D1 282 aaPredicted RBP16.38■□□□□ 0.21
SMTN-215ENST00000472911 OVOS2A0A0G2JMS6 1433 aa16.37■□□□□ 0.21
SMTN-215ENST00000472911 CEP350Q5VT06 3117 aa16.37■□□□□ 0.21
SMTN-215ENST00000472911 COL3A1P02461 1466 aaPredicted RBP16.37■□□□□ 0.21
SMTN-215ENST00000472911 PROM2Q8N271 834 aa16.37■□□□□ 0.21
SMTN-215ENST00000472911 EYA1Q99502 592 aa16.37■□□□□ 0.21
SMTN-215ENST00000472911 FHDC1Q9C0D6 1143 aaPredicted RBP16.37■□□□□ 0.21
SMTN-215ENST00000472911 PKD1L3Q7Z443 1732 aa16.36■□□□□ 0.21
SMTN-215ENST00000472911 EXOC5O00471 708 aa16.35■□□□□ 0.21
SMTN-215ENST00000472911 PPP2R1AP30153 589 aa16.35■□□□□ 0.21
SMTN-215ENST00000472911 MARCH10Q8NA82 808 aaPredicted RBP16.35■□□□□ 0.21
SMTN-215ENST00000472911 BCL11BQ9C0K0 894 aaPredicted RBP16.35■□□□□ 0.21
SMTN-215ENST00000472911 IL13P35225 146 aa16.34■□□□□ 0.21
SMTN-215ENST00000472911 IGSF1Q8N6C5 1336 aa16.34■□□□□ 0.21
SMTN-215ENST00000472911 KAT6BQ8WYB5 2073 aa16.34■□□□□ 0.21
SMTN-215ENST00000472911 RAPGEF4Q8WZA2 1011 aa16.32■□□□□ 0.2
SMTN-215ENST00000472911 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
SMTN-215ENST00000472911 TATP17735 454 aaPredicted RBP16.31■□□□□ 0.2
SMTN-215ENST00000472911 BCL9O00512 1426 aa16.3■□□□□ 0.2
SMTN-215ENST00000472911 STK32BQ9NY57 414 aa16.3■□□□□ 0.2
SMTN-215ENST00000472911 DOT1LQ8TEK3 1739 aa16.3■□□□□ 0.2
SMTN-215ENST00000472911 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
SMTN-215ENST00000472911 DIAPH1O60610 1272 aaKnown RBP16.29■□□□□ 0.2
SMTN-215ENST00000472911 SLC15A2Q16348 729 aa16.29■□□□□ 0.2
SMTN-215ENST00000472911 TXNRD1Q16881 649 aa16.29■□□□□ 0.2
SMTN-215ENST00000472911 AEBP1Q8IUX7 1158 aa16.29■□□□□ 0.2
SMTN-215ENST00000472911 ZCRB1Q8TBF4 217 aaKnown RBP16.29■□□□□ 0.2
SMTN-215ENST00000472911 MTFR1LQ9H019 292 aa16.29■□□□□ 0.2
SMTN-215ENST00000472911 KDRP35968 1356 aa16.28■□□□□ 0.2
SMTN-215ENST00000472911 GOLGB1Q14789 3259 aaKnown RBP16.28■□□□□ 0.2
SMTN-215ENST00000472911 GIGYF1O75420 1035 aaPredicted RBP16.27■□□□□ 0.2
SMTN-215ENST00000472911 RALBP1Q15311 655 aa16.27■□□□□ 0.2
SMTN-215ENST00000472911 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
SMTN-215ENST00000472911 TOGARAM1Q9Y4F4 1720 aa16.27■□□□□ 0.19
SMTN-215ENST00000472911 SULT6B1Q6IMI4 303 aa16.26■□□□□ 0.19
SMTN-215ENST00000472911 CFAP53Q96M91 514 aa16.26■□□□□ 0.19
SMTN-215ENST00000472911 BTAF1O14981 1849 aa16.26■□□□□ 0.19
SMTN-215ENST00000472911 ITGB4P16144 1822 aa16.25■□□□□ 0.19
SMTN-215ENST00000472911 VIRMAQ69YN4 1812 aaKnown RBP16.25■□□□□ 0.19
SMTN-215ENST00000472911 ARXQ96QS3 562 aa16.25■□□□□ 0.19
SMTN-215ENST00000472911 MAP3K5Q99683 1374 aa16.25■□□□□ 0.19
SMTN-215ENST00000472911 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
SMTN-215ENST00000472911 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
SMTN-215ENST00000472911 PCDH11YQ9BZA8 1340 aa16.24■□□□□ 0.19
SMTN-215ENST00000472911 CYP27B1O15528 508 aa16.24■□□□□ 0.19
SMTN-215ENST00000472911 HMOX1P09601 288 aa16.24■□□□□ 0.19
SMTN-215ENST00000472911 U2SURPO15042 1029 aaKnown RBP16.23■□□□□ 0.19
SMTN-215ENST00000472911 ACSBG1Q96GR2 724 aa16.23■□□□□ 0.19
SMTN-215ENST00000472911 PRKRIP1Q9H875 184 aaPredicted RBP16.23■□□□□ 0.19
SMTN-215ENST00000472911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMTN-215ENST00000472911 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
SMTN-215ENST00000472911 MYBBP1AQ9BQG0 1328 aaKnown RBP16.22■□□□□ 0.19
SMTN-215ENST00000472911 GPR162Q16538 588 aa16.22■□□□□ 0.19
SMTN-215ENST00000472911 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
SMTN-215ENST00000472911 SCN11AQ9UI33 1791 aa16.19■□□□□ 0.18
SMTN-215ENST00000472911 PHKG2P15735 406 aa16.19■□□□□ 0.18
SMTN-215ENST00000472911 PLEKHO1Q53GL0 409 aaPredicted RBP16.19■□□□□ 0.18
SMTN-215ENST00000472911 NUDCQ9Y266 331 aa16.19■□□□□ 0.18
SMTN-215ENST00000472911 NKX1-1Q15270 411 aaPredicted RBP16.18■□□□□ 0.18
SMTN-215ENST00000472911 AMOTQ4VCS5 1084 aa16.18■□□□□ 0.18
SMTN-215ENST00000472911 U2AF1L5P0DN76 240 aaPredicted RBP16.17■□□□□ 0.18
SMTN-215ENST00000472911 U2AF1Q01081 240 aaKnown RBP eCLIP16.17■□□□□ 0.18
SMTN-215ENST00000472911 ZNF530Q6P9A1 599 aaPredicted RBP16.17■□□□□ 0.18
SMTN-215ENST00000472911 IFNL2Q8IZJ0 200 aa16.17■□□□□ 0.18
SMTN-215ENST00000472911 RSPH6AQ9H0K4 717 aa16.17■□□□□ 0.18
SMTN-215ENST00000472911 PRIM1P49642 420 aaKnown RBP16.16■□□□□ 0.18
SMTN-215ENST00000472911 LY75O60449 1722 aa16.16■□□□□ 0.18
SMTN-215ENST00000472911 ADAMTS7Q9UKP4 1686 aa16.15■□□□□ 0.18
SMTN-215ENST00000472911 KDM6AO15550 1401 aaPredicted RBP16.15■□□□□ 0.18
SMTN-215ENST00000472911 ZNF827Q17R98 1081 aa16.15■□□□□ 0.18
SMTN-215ENST00000472911 SYTL4Q96C24 671 aaPredicted RBP16.15■□□□□ 0.18
SMTN-215ENST00000472911 DLG5Q8TDM6 1919 aa16.15■□□□□ 0.18
SMTN-215ENST00000472911 PRKAR2BP31323 418 aa16.14■□□□□ 0.17
SMTN-215ENST00000472911 MTHFSDQ2M296 383 aaKnown RBP16.14■□□□□ 0.17
SMTN-215ENST00000472911 PELP1Q8IZL8 1130 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms