RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ZCRB1Q8TBF4 217 aaKnown RBP26.73■■□□□ 1.87
SF1-213ENST00000472725 PKD1L3Q7Z443 1732 aa26.73■■□□□ 1.87
SF1-213ENST00000472725 U2SURPO15042 1029 aaKnown RBP26.72■■□□□ 1.87
SF1-213ENST00000472725 SPG7Q9UQ90 795 aa26.71■■□□□ 1.87
SF1-213ENST00000472725 BCL9O00512 1426 aa26.7■■□□□ 1.86
SF1-213ENST00000472725 AMOTQ4VCS5 1084 aa26.69■■□□□ 1.86
SF1-213ENST00000472725 SHANK3Q9BYB0 1731 aa26.68■■□□□ 1.86
SF1-213ENST00000472725 FCHSD2O94868 740 aa26.68■■□□□ 1.86
SF1-213ENST00000472725 FAM196AQ6ZSG2 479 aa26.68■■□□□ 1.86
SF1-213ENST00000472725 AEBP1Q8IUX7 1158 aa26.68■■□□□ 1.86
SF1-213ENST00000472725 PCDH11XQ9BZA7 1347 aa26.67■■□□□ 1.86
SF1-213ENST00000472725 PCDH11YQ9BZA8 1340 aa26.67■■□□□ 1.86
SF1-213ENST00000472725 U2AF1L5P0DN76 240 aaPredicted RBP26.67■■□□□ 1.86
SF1-213ENST00000472725 U2AF1Q01081 240 aaKnown RBP eCLIP26.67■■□□□ 1.863e-7■■■□□ 15.3
SF1-213ENST00000472725 PLEKHO1Q53GL0 409 aaPredicted RBP26.67■■□□□ 1.86
SF1-213ENST00000472725 HMOX1P09601 288 aa26.66■■□□□ 1.86
SF1-213ENST00000472725 MARCH10Q8NA82 808 aaPredicted RBP26.66■■□□□ 1.86
SF1-213ENST00000472725 PNNQ9H307 717 aaKnown RBP26.65■■□□□ 1.86
SF1-213ENST00000472725 DIEXFQ68CQ4 756 aaKnown RBP26.64■■□□□ 1.86
SF1-213ENST00000472725 RSPH6AQ9H0K4 717 aa26.63■■□□□ 1.85
SF1-213ENST00000472725 DDX54Q8TDD1 881 aaKnown RBP26.61■■□□□ 1.85
SF1-213ENST00000472725 WDR43Q15061 677 aaKnown RBP eCLIP26.6■■□□□ 1.85
SF1-213ENST00000472725 CCDC125Q86Z20 511 aa26.6■■□□□ 1.85
SF1-213ENST00000472725 IFNL2Q8IZJ0 200 aa26.6■■□□□ 1.85
SF1-213ENST00000472725 SBF2Q86WG5 1849 aa26.58■■□□□ 1.85
SF1-213ENST00000472725 CYP27B1O15528 508 aa26.58■■□□□ 1.85
SF1-213ENST00000472725 HSP90AB1P08238 724 aaKnown RBP26.58■■□□□ 1.85
SF1-213ENST00000472725 PRKAR2BP31323 418 aa26.58■■□□□ 1.85
SF1-213ENST00000472725 NKX1-1Q15270 411 aaPredicted RBP26.58■■□□□ 1.85
SF1-213ENST00000472725 NEFMP07197 916 aa26.57■■□□□ 1.84
SF1-213ENST00000472725 PHKG2P15735 406 aa26.56■■□□□ 1.84
SF1-213ENST00000472725 FAM182BQ5T319 152 aa26.56■■□□□ 1.84
SF1-213ENST00000472725 GAS2L2Q8NHY3 880 aa26.56■■□□□ 1.84
SF1-213ENST00000472725 MRS2Q9HD23 443 aa26.56■■□□□ 1.84
SF1-213ENST00000472725 ZNF530Q6P9A1 599 aaPredicted RBP26.55■■□□□ 1.84
SF1-213ENST00000472725 C1orf141Q5JVX7 400 aa26.54■■□□□ 1.84
SF1-213ENST00000472725 AKAP4Q5JQC9 854 aa26.53■■□□□ 1.84
SF1-213ENST00000472725 CCER2I3L3R5 266 aa26.52■■□□□ 1.84
SF1-213ENST00000472725 SOCS7O14512 581 aa26.52■■□□□ 1.84
SF1-213ENST00000472725 MTHFSDQ2M296 383 aaKnown RBP26.52■■□□□ 1.84
SF1-213ENST00000472725 UPF1Q92900 1129 aaKnown RBP eCLIP26.52■■□□□ 1.84
SF1-213ENST00000472725 PLEKHF1Q96S99 279 aa26.52■■□□□ 1.84
SF1-213ENST00000472725 NHSQ6T4R5 1651 aa26.51■■□□□ 1.83
SF1-213ENST00000472725 CCDC184Q52MB2 194 aa26.51■■□□□ 1.83
SF1-213ENST00000472725 DCAF5Q96JK2 942 aa26.51■■□□□ 1.83
SF1-213ENST00000472725 PNISRQ8TF01 805 aaKnown RBP26.5■■□□□ 1.83
SF1-213ENST00000472725 BCL11BQ9C0K0 894 aaPredicted RBP26.5■■□□□ 1.83
SF1-213ENST00000472725 ADAMTS8Q9UP79 889 aa26.5■■□□□ 1.83
SF1-213ENST00000472725 DOT1LQ8TEK3 1739 aa26.49■■□□□ 1.83
SF1-213ENST00000472725 SF3B2Q13435 895 aaKnown RBP26.49■■□□□ 1.83
SF1-213ENST00000472725 PHACTR3Q96KR7 559 aa26.49■■□□□ 1.83
SF1-213ENST00000472725 KAT6BQ8WYB5 2073 aa26.48■■□□□ 1.83
SF1-213ENST00000472725 MAPK8IP3Q9UPT6 1336 aa26.48■■□□□ 1.83
SF1-213ENST00000472725 TRIM37O94972 964 aa26.47■■□□□ 1.83
SF1-213ENST00000472725 TNS1Q9HBL0 1735 aaKnown RBP26.47■■□□□ 1.83
SF1-213ENST00000472725 RUNDC1Q96C34 613 aa26.46■■□□□ 1.83
SF1-213ENST00000472725 SCN11AQ9UI33 1791 aa26.46■■□□□ 1.83
SF1-213ENST00000472725 EP400Q96L91 3159 aa26.45■■□□□ 1.83
SF1-213ENST00000472725 ERVV-2B6SEH9 535 aa26.45■■□□□ 1.82
SF1-213ENST00000472725 MAP3K5Q99683 1374 aa26.45■■□□□ 1.82
SF1-213ENST00000472725 ADAMTS7Q9UKP4 1686 aa26.44■■□□□ 1.82
SF1-213ENST00000472725 GNAT3A8MTJ3 354 aa26.44■■□□□ 1.82
SF1-213ENST00000472725 HTATSF1O43719 755 aaKnown RBP26.44■■□□□ 1.82
SF1-213ENST00000472725 TOGARAM1Q9Y4F4 1720 aa26.44■■□□□ 1.82
SF1-213ENST00000472725 ACSBG1Q96GR2 724 aa26.43■■□□□ 1.82
SF1-213ENST00000472725 ITGB4P16144 1822 aa26.43■■□□□ 1.82
SF1-213ENST00000472725 VIRMAQ69YN4 1812 aaKnown RBP26.42■■□□□ 1.82
SF1-213ENST00000472725 KDM6AO15550 1401 aaPredicted RBP26.42■■□□□ 1.82
SF1-213ENST00000472725 PRIM1P49642 420 aaKnown RBP26.42■■□□□ 1.82
SF1-213ENST00000472725 RGPD3A6NKT7 1758 aaPredicted RBP26.41■■□□□ 1.82
SF1-213ENST00000472725 RGPD4Q7Z3J3 1758 aa26.41■■□□□ 1.82
SF1-213ENST00000472725 BAG6P46379 1132 aa26.41■■□□□ 1.82
SF1-213ENST00000472725 NFE2L2Q16236 605 aa26.41■■□□□ 1.82
SF1-213ENST00000472725 BTAF1O14981 1849 aa26.4■■□□□ 1.82
SF1-213ENST00000472725 KCNQ2O43526 872 aa26.4■■□□□ 1.82
SF1-213ENST00000472725 MPRIPQ6WCQ1 1025 aa26.4■■□□□ 1.82
SF1-213ENST00000472725 PLSCR1O15162 318 aa26.39■■□□□ 1.82
SF1-213ENST00000472725 SYTL4Q96C24 671 aaPredicted RBP26.39■■□□□ 1.82
SF1-213ENST00000472725 DLG5Q8TDM6 1919 aa26.39■■□□□ 1.81
SF1-213ENST00000472725 RNMTO43148 476 aaKnown RBP26.38■■□□□ 1.81
SF1-213ENST00000472725 APBA3O96018 575 aa26.38■■□□□ 1.81
SF1-213ENST00000472725 RTF1Q92541 710 aaKnown RBP26.38■■□□□ 1.81
SF1-213ENST00000472725 TMOD3Q9NYL9 352 aa26.38■■□□□ 1.81
SF1-213ENST00000472725 MRC1P22897 1456 aa26.37■■□□□ 1.81
SF1-213ENST00000472725 MIER1Q8N108 512 aa26.37■■□□□ 1.81
SF1-213ENST00000472725 TMPOP42166 694 aaKnown RBP26.36■■□□□ 1.81
SF1-213ENST00000472725 CABP4P57796 275 aa26.36■■□□□ 1.81
SF1-213ENST00000472725 LMOD3Q0VAK6 560 aa26.36■■□□□ 1.81
SF1-213ENST00000472725 CCDC146Q8IYE0 955 aa26.36■■□□□ 1.81
SF1-213ENST00000472725 CEMIPQ8WUJ3 1361 aa26.35■■□□□ 1.81
SF1-213ENST00000472725 PTF1AQ7RTS3 328 aa26.34■■□□□ 1.81
SF1-213ENST00000472725 SLC52A2Q9HAB3 445 aa26.34■■□□□ 1.81
SF1-213ENST00000472725 LGR6Q9HBX8 967 aa26.34■■□□□ 1.81
SF1-213ENST00000472725 NCBP3Q53F19 620 aaKnown RBP26.33■■□□□ 1.81
SF1-213ENST00000472725 IL17REQ8NFR9 667 aa26.33■■□□□ 1.81
SF1-213ENST00000472725 PIGBQ92521 554 aa26.33■■□□□ 1.81
SF1-213ENST00000472725 SMARCC1Q92922 1105 aaPredicted RBP26.33■■□□□ 1.81
SF1-213ENST00000472725 RIPK4P57078 832 aa26.32■■□□□ 1.8
SF1-213ENST00000472725 HMGB2P26583 209 aaKnown RBP26.31■■□□□ 1.8
SF1-213ENST00000472725 FAM9BQ8IZU0 186 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms