RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 HSPA1AP0DMV8 641 aaKnown RBP8.68□□□□□ -1.02
SIK3-208ENST00000472648 HSPA1BP0DMV9 641 aaKnown RBP8.68□□□□□ -1.02
SIK3-208ENST00000472648 CCDC88AQ3V6T2 1871 aa8.68□□□□□ -1.02
SIK3-208ENST00000472648 NFAT5O94916 1531 aa8.67□□□□□ -1.02
SIK3-208ENST00000472648 RGPD2P0DJD1 1756 aa8.67□□□□□ -1.02
SIK3-208ENST00000472648 KCNQ4P56696 695 aa8.67□□□□□ -1.02
SIK3-208ENST00000472648 FSTL1Q12841 308 aa8.67□□□□□ -1.02
SIK3-208ENST00000472648 NMRK2Q9NPI5 230 aa8.67□□□□□ -1.02
SIK3-208ENST00000472648 TOGARAM1Q9Y4F4 1720 aa8.67□□□□□ -1.02
SIK3-208ENST00000472648 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
SIK3-208ENST00000472648 COL23A1Q86Y22 540 aaPredicted RBP8.66□□□□□ -1.02
SIK3-208ENST00000472648 ITGB4P16144 1822 aa8.66□□□□□ -1.02
SIK3-208ENST00000472648 SOX12O15370 315 aa8.65□□□□□ -1.02
SIK3-208ENST00000472648 IL2RBP14784 551 aa8.65□□□□□ -1.02
SIK3-208ENST00000472648 KCNH5Q8NCM2 988 aa8.65□□□□□ -1.02
SIK3-208ENST00000472648 SYTL4Q96C24 671 aaPredicted RBP8.65□□□□□ -1.02
SIK3-208ENST00000472648 MPHOSPH9Q99550 1183 aa8.65□□□□□ -1.02
SIK3-208ENST00000472648 MON2Q7Z3U7 1717 aa8.65□□□□□ -1.03
SIK3-208ENST00000472648 PLEKHG2Q9H7P9 1386 aa8.64□□□□□ -1.03
SIK3-208ENST00000472648 SRPK2P78362 688 aaKnown RBP8.64□□□□□ -1.03
SIK3-208ENST00000472648 ARHGEF25Q86VW2 580 aa8.64□□□□□ -1.03
SIK3-208ENST00000472648 CCNL1Q9UK58 526 aaPredicted RBP8.64□□□□□ -1.03
SIK3-208ENST00000472648 NLRP2Q9NX02 1062 aa8.63□□□□□ -1.03
SIK3-208ENST00000472648 KCPQ6ZWJ8 1503 aa8.63□□□□□ -1.03
SIK3-208ENST00000472648 TIAM2Q8IVF5 1701 aa8.63□□□□□ -1.03
SIK3-208ENST00000472648 C10orf71Q711Q0 1435 aa8.63□□□□□ -1.03
SIK3-208ENST00000472648 ANKRD36BQ8N2N9 1353 aa8.62□□□□□ -1.03
SIK3-208ENST00000472648 FAM161AQ3B820 660 aa8.62□□□□□ -1.03
SIK3-208ENST00000472648 PPARGC1BQ86YN6 1023 aaKnown RBP8.62□□□□□ -1.03
SIK3-208ENST00000472648 FLAD1Q8NFF5 587 aa8.62□□□□□ -1.03
SIK3-208ENST00000472648 USP47Q96K76 1375 aa8.61□□□□□ -1.03
SIK3-208ENST00000472648 ERBB3P21860 1342 aa8.61□□□□□ -1.03
SIK3-208ENST00000472648 KDM2BQ8NHM5 1336 aa8.61□□□□□ -1.03
SIK3-208ENST00000472648 SMC1BQ8NDV3 1235 aa8.61□□□□□ -1.03
SIK3-208ENST00000472648 DDX54Q8TDD1 881 aaKnown RBP8.61□□□□□ -1.03
SIK3-208ENST00000472648 KDM2AQ9Y2K7 1162 aa8.61□□□□□ -1.03
SIK3-208ENST00000472648 VIRMAQ69YN4 1812 aaKnown RBP8.61□□□□□ -1.03
SIK3-208ENST00000472648 NSD2O96028 1365 aa8.61□□□□□ -1.03
SIK3-208ENST00000472648 HMGB2P26583 209 aaKnown RBP8.6□□□□□ -1.03
SIK3-208ENST00000472648 PRIM1P49642 420 aaKnown RBP8.6□□□□□ -1.03
SIK3-208ENST00000472648 NSD3Q9BZ95 1437 aa8.6□□□□□ -1.03
SIK3-208ENST00000472648 PXDNLA1KZ92 1463 aa8.59□□□□□ -1.03
SIK3-208ENST00000472648 ARHGAP27Q6ZUM4 889 aa8.59□□□□□ -1.03
SIK3-208ENST00000472648 DCAF11Q8TEB1 546 aa8.59□□□□□ -1.03
SIK3-208ENST00000472648 CABP2Q9NPB3 220 aa8.59□□□□□ -1.03
SIK3-208ENST00000472648 BCS1LQ9Y276 419 aa8.59□□□□□ -1.03
SIK3-208ENST00000472648 TNRC18O15417 2968 aaPredicted RBP8.59□□□□□ -1.03
SIK3-208ENST00000472648 C4AP0C0L4 1744 aa8.58□□□□□ -1.04
SIK3-208ENST00000472648 TTC21AQ8NDW8 1320 aa8.57□□□□□ -1.04
SIK3-208ENST00000472648 MAP2P11137 1827 aaKnown RBP8.57□□□□□ -1.04
SIK3-208ENST00000472648 ANKRD24Q8TF21 1146 aa8.57□□□□□ -1.04
SIK3-208ENST00000472648 AK7Q96M32 723 aa8.57□□□□□ -1.04
SIK3-208ENST00000472648 RRAGCQ9HB90 399 aa8.57□□□□□ -1.04
SIK3-208ENST00000472648 CABP1Q9NZU7 370 aa8.57□□□□□ -1.04
SIK3-208ENST00000472648 TTC21BQ7Z4L5 1316 aa8.56□□□□□ -1.04
SIK3-208ENST00000472648 DICER1Q9UPY3 1922 aaKnown RBP8.56□□□□□ -1.04
SIK3-208ENST00000472648 C9orf131Q5VYM1 1079 aa8.56□□□□□ -1.04
SIK3-208ENST00000472648 STAC3Q96MF2 364 aa8.56□□□□□ -1.04
SIK3-208ENST00000472648 PHF14O94880 888 aa8.55□□□□□ -1.04
SIK3-208ENST00000472648 MLLT1Q03111 559 aaPredicted RBP8.55□□□□□ -1.04
SIK3-208ENST00000472648 PRDM10Q9NQV6 1147 aa8.55□□□□□ -1.04
SIK3-208ENST00000472648 PALLDQ8WX93 1383 aa8.54□□□□□ -1.04
SIK3-208ENST00000472648 FOXN1O15353 648 aa8.54□□□□□ -1.04
SIK3-208ENST00000472648 FCHSD2O94868 740 aa8.54□□□□□ -1.04
SIK3-208ENST00000472648 TGFB2P61812 414 aa8.54□□□□□ -1.04
SIK3-208ENST00000472648 AIDAQ96BJ3 306 aa8.54□□□□□ -1.04
SIK3-208ENST00000472648 ZNF692Q9BU19 519 aaPredicted RBP8.54□□□□□ -1.04
SIK3-208ENST00000472648 RNF181Q9P0P0 153 aa8.54□□□□□ -1.04
SIK3-208ENST00000472648 CENPJQ9HC77 1338 aaPredicted RBP8.54□□□□□ -1.04
SIK3-208ENST00000472648 DLEC1Q9Y238 1755 aa8.53□□□□□ -1.04
SIK3-208ENST00000472648 A0A0G2JLW4 131 aa8.53□□□□□ -1.04
SIK3-208ENST00000472648 KTN1Q86UP2 1357 aaKnown RBP8.52□□□□□ -1.05
SIK3-208ENST00000472648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.52□□□□□ -1.05
SIK3-208ENST00000472648 CTCFP49711 727 aaPredicted RBP8.52□□□□□ -1.05
SIK3-208ENST00000472648 ABHD8Q96I13 439 aa8.52□□□□□ -1.05
SIK3-208ENST00000472648 PDE4DIPQ5VU43 2346 aa8.52□□□□□ -1.05
SIK3-208ENST00000472648 COL5A3P25940 1745 aaPredicted RBP8.51□□□□□ -1.05
SIK3-208ENST00000472648 MEGF6O75095 1541 aa8.51□□□□□ -1.05
SIK3-208ENST00000472648 MMP10P09238 476 aa8.51□□□□□ -1.05
SIK3-208ENST00000472648 SSFA2P28290 1259 aa8.51□□□□□ -1.05
SIK3-208ENST00000472648 AMIGO3Q86WK7 504 aa8.51□□□□□ -1.05
SIK3-208ENST00000472648 ZCRB1Q8TBF4 217 aaKnown RBP8.51□□□□□ -1.05
SIK3-208ENST00000472648 MKRN1Q9UHC7 482 aaKnown RBP8.51□□□□□ -1.05
SIK3-208ENST00000472648 CACNA1SQ13698 1873 aa8.51□□□□□ -1.05
SIK3-208ENST00000472648 VEGFAP15692 232 aaPredicted RBP8.5□□□□□ -1.05
SIK3-208ENST00000472648 DPEP1P16444 411 aa8.5□□□□□ -1.05
SIK3-208ENST00000472648 SMIM5Q71RC9 77 aa8.5□□□□□ -1.05
SIK3-208ENST00000472648 LTV1Q96GA3 475 aaPredicted RBP8.5□□□□□ -1.05
SIK3-208ENST00000472648 CCDC87Q9NVE4 849 aa8.5□□□□□ -1.05
SIK3-208ENST00000472648 EVC2Q86UK5 1308 aa8.5□□□□□ -1.05
SIK3-208ENST00000472648 ZC3H4Q9UPT8 1303 aaKnown RBP8.5□□□□□ -1.05
SIK3-208ENST00000472648 AFDNP55196 1824 aaKnown RBP8.5□□□□□ -1.05
SIK3-208ENST00000472648 USP31Q70CQ4 1352 aa8.49□□□□□ -1.05
SIK3-208ENST00000472648 CCDC85CA6NKD9 419 aa8.49□□□□□ -1.05
SIK3-208ENST00000472648 CREBZFQ9NS37 354 aa8.49□□□□□ -1.05
SIK3-208ENST00000472648 ZNF831Q5JPB2 1677 aa8.49□□□□□ -1.05
SIK3-208ENST00000472648 LBX1P52954 281 aa8.48□□□□□ -1.05
SIK3-208ENST00000472648 MPRIPQ6WCQ1 1025 aa8.48□□□□□ -1.05
SIK3-208ENST00000472648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.48□□□□□ -1.05
SIK3-208ENST00000472648 SMARCC1Q92922 1105 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms