RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 FAM98CQ17RN3 349 aaKnown RBP13.89□□□□□ -0.19
UBE2F-220ENST00000472479 GJD4Q96KN9 370 aaPredicted RBP13.89□□□□□ -0.19
UBE2F-220ENST00000472479 SPG7Q9UQ90 795 aa13.89□□□□□ -0.19
UBE2F-220ENST00000472479 SPATA31A5Q5VU36 1347 aa13.89□□□□□ -0.19
UBE2F-220ENST00000472479 SPATA31A7Q8IWB4 1347 aa13.89□□□□□ -0.19
UBE2F-220ENST00000472479 LMO7Q8WWI1 1683 aa13.88□□□□□ -0.19
UBE2F-220ENST00000472479 BCL9LQ86UU0 1499 aa13.88□□□□□ -0.19
UBE2F-220ENST00000472479 EXOC5O00471 708 aa13.88□□□□□ -0.19
UBE2F-220ENST00000472479 AMOTQ4VCS5 1084 aa13.88□□□□□ -0.19
UBE2F-220ENST00000472479 PLCH1Q4KWH8 1693 aa13.88□□□□□ -0.19
UBE2F-220ENST00000472479 APAF1O14727 1248 aa13.87□□□□□ -0.19
UBE2F-220ENST00000472479 C1QBPQ07021 282 aaKnown RBP13.87□□□□□ -0.19
UBE2F-220ENST00000472479 C1orf141Q5JVX7 400 aa13.87□□□□□ -0.19
UBE2F-220ENST00000472479 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
UBE2F-220ENST00000472479 CDCA7Q9BWT1 371 aaPredicted RBP13.87□□□□□ -0.19
UBE2F-220ENST00000472479 HNRNPUQ00839 825 aaKnown RBP eCLIP13.87□□□□□ -0.19
UBE2F-220ENST00000472479 GAS2L2Q8NHY3 880 aa13.87□□□□□ -0.19
UBE2F-220ENST00000472479 ZCRB1Q8TBF4 217 aaKnown RBP13.87□□□□□ -0.19
UBE2F-220ENST00000472479 RRP7AQ9Y3A4 280 aaKnown RBP13.87□□□□□ -0.19
UBE2F-220ENST00000472479 RXRBP28702 533 aa13.86□□□□□ -0.19
UBE2F-220ENST00000472479 RBM6P78332 1123 aaKnown RBP13.86□□□□□ -0.19
UBE2F-220ENST00000472479 PDE3BQ13370 1112 aa13.86□□□□□ -0.19
UBE2F-220ENST00000472479 DDB1Q16531 1140 aa13.86□□□□□ -0.19
UBE2F-220ENST00000472479 ZNF530Q6P9A1 599 aaPredicted RBP13.86□□□□□ -0.19
UBE2F-220ENST00000472479 RTF1Q92541 710 aaKnown RBP13.86□□□□□ -0.19
UBE2F-220ENST00000472479 PHACTR3Q96KR7 559 aa13.86□□□□□ -0.19
UBE2F-220ENST00000472479 NWD2Q9ULI1 1742 aa13.85□□□□□ -0.19
UBE2F-220ENST00000472479 RIPK4P57078 832 aa13.85□□□□□ -0.19
UBE2F-220ENST00000472479 NFE2L2Q16236 605 aa13.84□□□□□ -0.19
UBE2F-220ENST00000472479 MTHFSDQ2M296 383 aaKnown RBP13.84□□□□□ -0.19
UBE2F-220ENST00000472479 BARGINQ6ZT62 677 aa13.84□□□□□ -0.19
UBE2F-220ENST00000472479 PLEKHF1Q96S99 279 aa13.84□□□□□ -0.19
UBE2F-220ENST00000472479 KDRP35968 1356 aa13.83□□□□□ -0.19
UBE2F-220ENST00000472479 FAM208AQ9UK61 1670 aaKnown RBP13.83□□□□□ -0.2
UBE2F-220ENST00000472479 TMPOP42166 694 aaKnown RBP13.83□□□□□ -0.2
UBE2F-220ENST00000472479 LMOD3Q0VAK6 560 aa13.82□□□□□ -0.2
UBE2F-220ENST00000472479 IFNL2Q8IZJ0 200 aa13.82□□□□□ -0.2
UBE2F-220ENST00000472479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.2
UBE2F-220ENST00000472479 ATRNO75882 1429 aa13.82□□□□□ -0.2
UBE2F-220ENST00000472479 RGPD2P0DJD1 1756 aa13.82□□□□□ -0.2
UBE2F-220ENST00000472479 GNAT3A8MTJ3 354 aa13.81□□□□□ -0.2
UBE2F-220ENST00000472479 SEPT12Q8IYM1 358 aa13.81□□□□□ -0.2
UBE2F-220ENST00000472479 PCDH11XQ9BZA7 1347 aa13.81□□□□□ -0.2
UBE2F-220ENST00000472479 PCDH11YQ9BZA8 1340 aa13.81□□□□□ -0.2
UBE2F-220ENST00000472479 NRAPQ86VF7 1730 aa13.81□□□□□ -0.2
UBE2F-220ENST00000472479 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
UBE2F-220ENST00000472479 AKAP4Q5JQC9 854 aa13.8□□□□□ -0.2
UBE2F-220ENST00000472479 MEGF6O75095 1541 aa13.8□□□□□ -0.2
UBE2F-220ENST00000472479 POTEAQ6S8J7 498 aa13.8□□□□□ -0.2
UBE2F-220ENST00000472479 MPRIPQ6WCQ1 1025 aa13.79□□□□□ -0.2
UBE2F-220ENST00000472479 RGS17Q9UGC6 210 aaPredicted RBP13.79□□□□□ -0.2
UBE2F-220ENST00000472479 LAS1LQ9Y4W2 734 aaKnown RBP13.79□□□□□ -0.2
UBE2F-220ENST00000472479 OVOS2A0A0G2JMS6 1433 aa13.78□□□□□ -0.2
UBE2F-220ENST00000472479 RGPD1P0DJD0 1748 aa13.78□□□□□ -0.2
UBE2F-220ENST00000472479 PHKG2P15735 406 aa13.78□□□□□ -0.2
UBE2F-220ENST00000472479 NGEFQ8N5V2 710 aa13.78□□□□□ -0.2
UBE2F-220ENST00000472479 CALD1Q05682 793 aaKnown RBP13.77□□□□□ -0.21
UBE2F-220ENST00000472479 TEFQ10587 303 aa13.77□□□□□ -0.21
UBE2F-220ENST00000472479 DCTN1Q14203 1278 aa13.77□□□□□ -0.21
UBE2F-220ENST00000472479 SYTL4Q96C24 671 aaPredicted RBP13.77□□□□□ -0.21
UBE2F-220ENST00000472479 NCAPD2Q15021 1401 aa13.77□□□□□ -0.21
UBE2F-220ENST00000472479 MAP3K5Q99683 1374 aa13.76□□□□□ -0.21
UBE2F-220ENST00000472479 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.76□□□□□ -0.21
UBE2F-220ENST00000472479 CYP27B1O15528 508 aa13.76□□□□□ -0.21
UBE2F-220ENST00000472479 HTATSF1O43719 755 aaKnown RBP13.76□□□□□ -0.21
UBE2F-220ENST00000472479 MCM10Q7L590 875 aa13.76□□□□□ -0.21
UBE2F-220ENST00000472479 ONECUT3O60422 494 aaPredicted RBP13.75□□□□□ -0.21
UBE2F-220ENST00000472479 CABP4P57796 275 aa13.75□□□□□ -0.21
UBE2F-220ENST00000472479 KRT27Q7Z3Y8 459 aa13.75□□□□□ -0.21
UBE2F-220ENST00000472479 DCAF5Q96JK2 942 aa13.75□□□□□ -0.21
UBE2F-220ENST00000472479 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
UBE2F-220ENST00000472479 WWC1Q8IX03 1113 aa13.74□□□□□ -0.21
UBE2F-220ENST00000472479 THUMPD2Q9BTF0 503 aaKnown RBP13.74□□□□□ -0.21
UBE2F-220ENST00000472479 DISP2A7MBM2 1401 aa13.74□□□□□ -0.21
UBE2F-220ENST00000472479 PLEKHG2Q9H7P9 1386 aa13.74□□□□□ -0.21
UBE2F-220ENST00000472479 PARP4Q9UKK3 1724 aaKnown RBP13.74□□□□□ -0.21
UBE2F-220ENST00000472479 FAM182BQ5T319 152 aa13.74□□□□□ -0.21
UBE2F-220ENST00000472479 MARCH10Q8NA82 808 aaPredicted RBP13.74□□□□□ -0.21
UBE2F-220ENST00000472479 LGR6Q9HBX8 967 aa13.74□□□□□ -0.21
UBE2F-220ENST00000472479 GLI3P10071 1580 aa13.73□□□□□ -0.21
UBE2F-220ENST00000472479 CCDC27Q2M243 656 aa13.73□□□□□ -0.21
UBE2F-220ENST00000472479 ACSBG1Q96GR2 724 aa13.73□□□□□ -0.21
UBE2F-220ENST00000472479 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
UBE2F-220ENST00000472479 TNS2Q63HR2 1409 aa13.72□□□□□ -0.21
UBE2F-220ENST00000472479 GOLGA2Q08379 1002 aa13.72□□□□□ -0.21
UBE2F-220ENST00000472479 IL17REQ8NFR9 667 aa13.72□□□□□ -0.21
UBE2F-220ENST00000472479 TMOD3Q9NYL9 352 aa13.72□□□□□ -0.21
UBE2F-220ENST00000472479 WDR63Q8IWG1 891 aa13.71□□□□□ -0.21
UBE2F-220ENST00000472479 ERVV-2B6SEH9 535 aa13.7□□□□□ -0.22
UBE2F-220ENST00000472479 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
UBE2F-220ENST00000472479 NKX1-1Q15270 411 aaPredicted RBP13.7□□□□□ -0.22
UBE2F-220ENST00000472479 TAF7Q15545 349 aaPredicted RBP13.7□□□□□ -0.22
UBE2F-220ENST00000472479 FAM196AQ6ZSG2 479 aa13.7□□□□□ -0.22
UBE2F-220ENST00000472479 NFATC2IPQ8NCF5 419 aa13.7□□□□□ -0.22
UBE2F-220ENST00000472479 ZBED9Q6R2W3 1325 aa13.7□□□□□ -0.22
UBE2F-220ENST00000472479 BTBD11A6QL63 1104 aa13.69□□□□□ -0.22
UBE2F-220ENST00000472479 GNAI1P63096 354 aa13.69□□□□□ -0.22
UBE2F-220ENST00000472479 MYH16Q9H6N6 1097 aa13.69□□□□□ -0.22
UBE2F-220ENST00000472479 TSPYL4Q9UJ04 414 aa13.69□□□□□ -0.22
UBE2F-220ENST00000472479 TTC5Q8N0Z6 440 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms