RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 RSPH6AQ9H0K4 717 aa17.19■□□□□ 0.34
SEC16A-209ENST00000472305 PNISRQ8TF01 805 aaKnown RBP17.18■□□□□ 0.34
SEC16A-209ENST00000472305 RAPGEF4Q8WZA2 1011 aa17.18■□□□□ 0.34
SEC16A-209ENST00000472305 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
SEC16A-209ENST00000472305 PRKAR2BP31323 418 aa17.17■□□□□ 0.34
SEC16A-209ENST00000472305 FAM182BQ5T319 152 aa17.17■□□□□ 0.34
SEC16A-209ENST00000472305 CDCA7Q9BWT1 371 aaPredicted RBP17.17■□□□□ 0.34
SEC16A-209ENST00000472305 THSD7AQ9UPZ6 1657 aa17.16■□□□□ 0.34
SEC16A-209ENST00000472305 OVOS2A0A0G2JMS6 1433 aa17.16■□□□□ 0.34
SEC16A-209ENST00000472305 EXOC5O00471 708 aa17.16■□□□□ 0.34
SEC16A-209ENST00000472305 DDB1Q16531 1140 aa17.16■□□□□ 0.34
SEC16A-209ENST00000472305 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
SEC16A-209ENST00000472305 CCER2I3L3R5 266 aa17.15■□□□□ 0.34
SEC16A-209ENST00000472305 ZCRB1Q8TBF4 217 aaKnown RBP17.15■□□□□ 0.34
SEC16A-209ENST00000472305 FCHSD2O94868 740 aa17.14■□□□□ 0.33
SEC16A-209ENST00000472305 WDR43Q15061 677 aaKnown RBP eCLIP17.14■□□□□ 0.33
SEC16A-209ENST00000472305 CCDC146Q8IYE0 955 aa17.14■□□□□ 0.33
SEC16A-209ENST00000472305 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
SEC16A-209ENST00000472305 PLEKHF1Q96S99 279 aa17.14■□□□□ 0.33
SEC16A-209ENST00000472305 WNK3Q9BYP7 1800 aa17.13■□□□□ 0.33
SEC16A-209ENST00000472305 MTHFSDQ2M296 383 aaKnown RBP17.13■□□□□ 0.33
SEC16A-209ENST00000472305 KRT27Q7Z3Y8 459 aa17.13■□□□□ 0.33
SEC16A-209ENST00000472305 DDX54Q8TDD1 881 aaKnown RBP17.13■□□□□ 0.33
SEC16A-209ENST00000472305 LRRC37A3O60309 1634 aa17.12■□□□□ 0.33
SEC16A-209ENST00000472305 CYP27B1O15528 508 aa17.12■□□□□ 0.33
SEC16A-209ENST00000472305 PDE3BQ13370 1112 aa17.12■□□□□ 0.33
SEC16A-209ENST00000472305 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
SEC16A-209ENST00000472305 TNS2Q63HR2 1409 aa17.12■□□□□ 0.33
SEC16A-209ENST00000472305 SENP3-EIF4A1A0A087X0R7 540 aa17.11■□□□□ 0.33
SEC16A-209ENST00000472305 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
SEC16A-209ENST00000472305 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
SEC16A-209ENST00000472305 SPG7Q9UQ90 795 aa17.1■□□□□ 0.33
SEC16A-209ENST00000472305 ZNF530Q6P9A1 599 aaPredicted RBP17.09■□□□□ 0.33
SEC16A-209ENST00000472305 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.33
SEC16A-209ENST00000472305 BRWD3Q6RI45 1802 aa17.09■□□□□ 0.33
SEC16A-209ENST00000472305 PHKG2P15735 406 aa17.08■□□□□ 0.32
SEC16A-209ENST00000472305 AMOTQ4VCS5 1084 aa17.08■□□□□ 0.32
SEC16A-209ENST00000472305 SHANK3Q9BYB0 1731 aa17.07■□□□□ 0.32
SEC16A-209ENST00000472305 PCDH11XQ9BZA7 1347 aa17.06■□□□□ 0.32
SEC16A-209ENST00000472305 PCDH11YQ9BZA8 1340 aa17.06■□□□□ 0.32
SEC16A-209ENST00000472305 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
SEC16A-209ENST00000472305 RUNDC1Q96C34 613 aa17.06■□□□□ 0.32
SEC16A-209ENST00000472305 RRP7AQ9Y3A4 280 aaKnown RBP17.06■□□□□ 0.32
SEC16A-209ENST00000472305 PKD1L3Q7Z443 1732 aa17.05■□□□□ 0.32
SEC16A-209ENST00000472305 PTF1AQ7RTS3 328 aa17.05■□□□□ 0.32
SEC16A-209ENST00000472305 ACSBG1Q96GR2 724 aa17.05■□□□□ 0.32
SEC16A-209ENST00000472305 MPRIPQ6WCQ1 1025 aa17.04■□□□□ 0.32
SEC16A-209ENST00000472305 GAS2L2Q8NHY3 880 aa17.04■□□□□ 0.32
SEC16A-209ENST00000472305 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
SEC16A-209ENST00000472305 PLEKHG2Q9H7P9 1386 aa17.03■□□□□ 0.32
SEC16A-209ENST00000472305 MAPK8IP3Q9UPT6 1336 aa17.03■□□□□ 0.32
SEC16A-209ENST00000472305 APAF1O14727 1248 aa17.03■□□□□ 0.32
SEC16A-209ENST00000472305 NKX1-1Q15270 411 aaPredicted RBP17.03■□□□□ 0.32
SEC16A-209ENST00000472305 AKAP4Q5JQC9 854 aa17.03■□□□□ 0.32
SEC16A-209ENST00000472305 PNNQ9H307 717 aaKnown RBP17.03■□□□□ 0.32
SEC16A-209ENST00000472305 KCNQ2O43526 872 aa17.02■□□□□ 0.32
SEC16A-209ENST00000472305 TMPOP42166 694 aaKnown RBP17.02■□□□□ 0.32
SEC16A-209ENST00000472305 NEUROD2Q15784 382 aa17.02■□□□□ 0.32
SEC16A-209ENST00000472305 NFE2L2Q16236 605 aa17.02■□□□□ 0.32
SEC16A-209ENST00000472305 C1orf141Q5JVX7 400 aa17.02■□□□□ 0.32
SEC16A-209ENST00000472305 DCTN1Q14203 1278 aa17.01■□□□□ 0.31
SEC16A-209ENST00000472305 FAM196AQ6ZSG2 479 aa17.01■□□□□ 0.31
SEC16A-209ENST00000472305 IL17REQ8NFR9 667 aa17.01■□□□□ 0.31
SEC16A-209ENST00000472305 KDM6AO15550 1401 aaPredicted RBP17.01■□□□□ 0.31
SEC16A-209ENST00000472305 NEFMP07197 916 aa17■□□□□ 0.31
SEC16A-209ENST00000472305 PRIM1P49642 420 aaKnown RBP17■□□□□ 0.31
SEC16A-209ENST00000472305 RIPK4P57078 832 aa17■□□□□ 0.31
SEC16A-209ENST00000472305 DEFB132Q7Z7B7 95 aa17■□□□□ 0.31
SEC16A-209ENST00000472305 GNAT3A8MTJ3 354 aa16.99■□□□□ 0.31
SEC16A-209ENST00000472305 RNMTO43148 476 aaKnown RBP16.99■□□□□ 0.31
SEC16A-209ENST00000472305 TRIM37O94972 964 aa16.99■□□□□ 0.31
SEC16A-209ENST00000472305 MCM10Q7L590 875 aa16.99■□□□□ 0.31
SEC16A-209ENST00000472305 MAP3K5Q99683 1374 aa16.99■□□□□ 0.31
SEC16A-209ENST00000472305 BCL9O00512 1426 aa16.98■□□□□ 0.31
SEC16A-209ENST00000472305 DCAF5Q96JK2 942 aa16.98■□□□□ 0.31
SEC16A-209ENST00000472305 THUMPD2Q9BTF0 503 aaKnown RBP16.98■□□□□ 0.31
SEC16A-209ENST00000472305 SALL2Q9Y467 1007 aaPredicted RBP16.98■□□□□ 0.31
SEC16A-209ENST00000472305 HSP90AB1P08238 724 aaKnown RBP16.97■□□□□ 0.31
SEC16A-209ENST00000472305 SF3B2Q13435 895 aaKnown RBP16.97■□□□□ 0.31
SEC16A-209ENST00000472305 SYTL4Q96C24 671 aaPredicted RBP16.97■□□□□ 0.31
SEC16A-209ENST00000472305 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
SEC16A-209ENST00000472305 PIGBQ92521 554 aa16.95■□□□□ 0.3
SEC16A-209ENST00000472305 TOGARAM1Q9Y4F4 1720 aa16.95■□□□□ 0.3
SEC16A-209ENST00000472305 ERVV-2B6SEH9 535 aa16.94■□□□□ 0.3
SEC16A-209ENST00000472305 HTATSF1O43719 755 aaKnown RBP16.94■□□□□ 0.3
SEC16A-209ENST00000472305 NFATC2IPQ8NCF5 419 aa16.94■□□□□ 0.3
SEC16A-209ENST00000472305 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
SEC16A-209ENST00000472305 PSDA5PKW4 1024 aaPredicted RBP16.93■□□□□ 0.3
SEC16A-209ENST00000472305 CABP4P57796 275 aa16.93■□□□□ 0.3
SEC16A-209ENST00000472305 BCL11BQ9C0K0 894 aaPredicted RBP16.93■□□□□ 0.3
SEC16A-209ENST00000472305 CEMIPQ8WUJ3 1361 aa16.92■□□□□ 0.3
SEC16A-209ENST00000472305 SLC52A2Q9HAB3 445 aa16.92■□□□□ 0.3
SEC16A-209ENST00000472305 DOT1LQ8TEK3 1739 aa16.92■□□□□ 0.3
SEC16A-209ENST00000472305 TMOD3Q9NYL9 352 aa16.91■□□□□ 0.3
SEC16A-209ENST00000472305 MIS18AQ9NYP9 233 aa16.91■□□□□ 0.3
SEC16A-209ENST00000472305 DLG5Q8TDM6 1919 aa16.9■□□□□ 0.3
SEC16A-209ENST00000472305 APBA3O96018 575 aa16.9■□□□□ 0.3
SEC16A-209ENST00000472305 YY1P25490 414 aa16.9■□□□□ 0.3
SEC16A-209ENST00000472305 SLC39A6Q13433 755 aa16.9■□□□□ 0.3
SEC16A-209ENST00000472305 ADAMTS7Q9UKP4 1686 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms