RNA–Protein interactions for RNA: ENST00000471845.3

RN7SL643P-201, Transcript of RNA, 7SL, cytoplasmic 643, pseudogene, humanhuman

BASIC

Gene RN7SL643P, Length 291 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL643P-201ENST00000471845 AMOTQ4VCS5 1084 aa8.51□□□□□ -1.05
RN7SL643P-201ENST00000471845 THSD7AQ9UPZ6 1657 aa8.5□□□□□ -1.05
RN7SL643P-201ENST00000471845 EXOC5O00471 708 aa8.5□□□□□ -1.05
RN7SL643P-201ENST00000471845 BCL9O00512 1426 aa8.5□□□□□ -1.05
RN7SL643P-201ENST00000471845 FAM98CQ17RN3 349 aaKnown RBP8.5□□□□□ -1.05
RN7SL643P-201ENST00000471845 SEPT12Q8IYM1 358 aa8.5□□□□□ -1.05
RN7SL643P-201ENST00000471845 RTN4Q9NQC3 1192 aaKnown RBP8.5□□□□□ -1.05
RN7SL643P-201ENST00000471845 PARP4Q9UKK3 1724 aaKnown RBP8.5□□□□□ -1.05
RN7SL643P-201ENST00000471845 OVOS2A0A0G2JMS6 1433 aa8.49□□□□□ -1.05
RN7SL643P-201ENST00000471845 DDB1Q16531 1140 aa8.49□□□□□ -1.05
RN7SL643P-201ENST00000471845 SULT6B1Q6IMI4 303 aa8.49□□□□□ -1.05
RN7SL643P-201ENST00000471845 USP35Q9P2H5 1018 aa8.49□□□□□ -1.05
RN7SL643P-201ENST00000471845 SPG7Q9UQ90 795 aa8.49□□□□□ -1.05
RN7SL643P-201ENST00000471845 TNS2Q63HR2 1409 aa8.48□□□□□ -1.05
RN7SL643P-201ENST00000471845 U2SURPO15042 1029 aaKnown RBP8.48□□□□□ -1.05
RN7SL643P-201ENST00000471845 U2AF1L5P0DN76 240 aaPredicted RBP8.48□□□□□ -1.05
RN7SL643P-201ENST00000471845 U2AF1Q01081 240 aaKnown RBP eCLIP8.48□□□□□ -1.05
RN7SL643P-201ENST00000471845 PDE3BQ13370 1112 aa8.48□□□□□ -1.05
RN7SL643P-201ENST00000471845 PLEKHO1Q53GL0 409 aaPredicted RBP8.48□□□□□ -1.05
RN7SL643P-201ENST00000471845 ZCRB1Q8TBF4 217 aaKnown RBP8.48□□□□□ -1.05
RN7SL643P-201ENST00000471845 WNK3Q9BYP7 1800 aa8.47□□□□□ -1.05
RN7SL643P-201ENST00000471845 RGS12O14924 1447 aa8.47□□□□□ -1.05
RN7SL643P-201ENST00000471845 NEFMP07197 916 aa8.47□□□□□ -1.05
RN7SL643P-201ENST00000471845 WDR43Q15061 677 aaKnown RBP eCLIP8.47□□□□□ -1.05
RN7SL643P-201ENST00000471845 NKX1-1Q15270 411 aaPredicted RBP8.47□□□□□ -1.05
RN7SL643P-201ENST00000471845 KRT27Q7Z3Y8 459 aa8.47□□□□□ -1.05
RN7SL643P-201ENST00000471845 PNISRQ8TF01 805 aaKnown RBP8.47□□□□□ -1.05
RN7SL643P-201ENST00000471845 RSPH6AQ9H0K4 717 aa8.47□□□□□ -1.05
RN7SL643P-201ENST00000471845 PCDH11XQ9BZA7 1347 aa8.47□□□□□ -1.05
RN7SL643P-201ENST00000471845 PCDH11YQ9BZA8 1340 aa8.47□□□□□ -1.05
RN7SL643P-201ENST00000471845 RGPD2P0DJD1 1756 aa8.46□□□□□ -1.05
RN7SL643P-201ENST00000471845 MEGF6O75095 1541 aa8.46□□□□□ -1.05
RN7SL643P-201ENST00000471845 HSP90AB1P08238 724 aaKnown RBP8.46□□□□□ -1.06
RN7SL643P-201ENST00000471845 FAM196AQ6ZSG2 479 aa8.46□□□□□ -1.06
RN7SL643P-201ENST00000471845 USHBP1Q8N6Y0 703 aa8.46□□□□□ -1.06
RN7SL643P-201ENST00000471845 GAS2L2Q8NHY3 880 aa8.46□□□□□ -1.06
RN7SL643P-201ENST00000471845 MRS2Q9HD23 443 aa8.46□□□□□ -1.06
RN7SL643P-201ENST00000471845 PKD1L3Q7Z443 1732 aa8.46□□□□□ -1.06
RN7SL643P-201ENST00000471845 LRRC37A3O60309 1634 aa8.45□□□□□ -1.06
RN7SL643P-201ENST00000471845 HTATSF1O43719 755 aaKnown RBP8.45□□□□□ -1.06
RN7SL643P-201ENST00000471845 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
RN7SL643P-201ENST00000471845 AEBP1Q8IUX7 1158 aa8.45□□□□□ -1.06
RN7SL643P-201ENST00000471845 IFNL2Q8IZJ0 200 aa8.45□□□□□ -1.06
RN7SL643P-201ENST00000471845 NGEFQ8N5V2 710 aa8.45□□□□□ -1.06
RN7SL643P-201ENST00000471845 PLEKHF1Q96S99 279 aa8.45□□□□□ -1.06
RN7SL643P-201ENST00000471845 A0A0G2JS52 829 aa8.44□□□□□ -1.06
RN7SL643P-201ENST00000471845 HMOX1P09601 288 aa8.44□□□□□ -1.06
RN7SL643P-201ENST00000471845 PHKG2P15735 406 aa8.44□□□□□ -1.06
RN7SL643P-201ENST00000471845 PRKAR2BP31323 418 aa8.44□□□□□ -1.06
RN7SL643P-201ENST00000471845 MYT1Q01538 1121 aa8.44□□□□□ -1.06
RN7SL643P-201ENST00000471845 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
RN7SL643P-201ENST00000471845 MARCH10Q8NA82 808 aaPredicted RBP8.44□□□□□ -1.06
RN7SL643P-201ENST00000471845 RUNDC1Q96C34 613 aa8.44□□□□□ -1.06
RN7SL643P-201ENST00000471845 ADAMTS8Q9UP79 889 aa8.44□□□□□ -1.06
RN7SL643P-201ENST00000471845 CYP27B1O15528 508 aa8.43□□□□□ -1.06
RN7SL643P-201ENST00000471845 C1orf141Q5JVX7 400 aa8.43□□□□□ -1.06
RN7SL643P-201ENST00000471845 SAMD1Q6SPF0 538 aaPredicted RBP8.43□□□□□ -1.06
RN7SL643P-201ENST00000471845 DCAF5Q96JK2 942 aa8.43□□□□□ -1.06
RN7SL643P-201ENST00000471845 MAPK8IP3Q9UPT6 1336 aa8.43□□□□□ -1.06
RN7SL643P-201ENST00000471845 ERVV-2B6SEH9 535 aa8.42□□□□□ -1.06
RN7SL643P-201ENST00000471845 HMGB2P26583 209 aaKnown RBP8.42□□□□□ -1.06
RN7SL643P-201ENST00000471845 MTHFSDQ2M296 383 aaKnown RBP8.42□□□□□ -1.06
RN7SL643P-201ENST00000471845 CCDC184Q52MB2 194 aa8.42□□□□□ -1.06
RN7SL643P-201ENST00000471845 ZNF530Q6P9A1 599 aaPredicted RBP8.42□□□□□ -1.06
RN7SL643P-201ENST00000471845 MIER1Q8N108 512 aa8.42□□□□□ -1.06
RN7SL643P-201ENST00000471845 DDX54Q8TDD1 881 aaKnown RBP8.42□□□□□ -1.06
RN7SL643P-201ENST00000471845 BRWD3Q6RI45 1802 aa8.42□□□□□ -1.06
RN7SL643P-201ENST00000471845 GNAT3A8MTJ3 354 aa8.41□□□□□ -1.06
RN7SL643P-201ENST00000471845 LMOD3Q0VAK6 560 aa8.41□□□□□ -1.06
RN7SL643P-201ENST00000471845 NFE2L2Q16236 605 aa8.41□□□□□ -1.06
RN7SL643P-201ENST00000471845 PHACTR3Q96KR7 559 aa8.41□□□□□ -1.06
RN7SL643P-201ENST00000471845 BCL11BQ9C0K0 894 aaPredicted RBP8.41□□□□□ -1.06
RN7SL643P-201ENST00000471845 SHANK3Q9BYB0 1731 aa8.4□□□□□ -1.06
RN7SL643P-201ENST00000471845 MAP3K5Q99683 1374 aa8.4□□□□□ -1.06
RN7SL643P-201ENST00000471845 TMPOP42166 694 aaKnown RBP8.4□□□□□ -1.06
RN7SL643P-201ENST00000471845 CCDC27Q2M243 656 aa8.4□□□□□ -1.06
RN7SL643P-201ENST00000471845 ADAMTS7Q9UKP4 1686 aa8.4□□□□□ -1.07
RN7SL643P-201ENST00000471845 CEMIPQ8WUJ3 1361 aa8.39□□□□□ -1.07
RN7SL643P-201ENST00000471845 PLSCR1O15162 318 aa8.39□□□□□ -1.07
RN7SL643P-201ENST00000471845 RTF1Q92541 710 aaKnown RBP8.39□□□□□ -1.07
RN7SL643P-201ENST00000471845 BABAM1Q9NWV8 329 aa8.39□□□□□ -1.07
RN7SL643P-201ENST00000471845 ATF5Q9Y2D1 282 aaPredicted RBP8.39□□□□□ -1.07
RN7SL643P-201ENST00000471845 RNMTO43148 476 aaKnown RBP8.38□□□□□ -1.07
RN7SL643P-201ENST00000471845 CALD1Q05682 793 aaKnown RBP8.38□□□□□ -1.07
RN7SL643P-201ENST00000471845 ILDR2Q71H61 639 aa8.38□□□□□ -1.07
RN7SL643P-201ENST00000471845 MRC1P22897 1456 aa8.38□□□□□ -1.07
RN7SL643P-201ENST00000471845 NHSQ6T4R5 1651 aa8.37□□□□□ -1.07
RN7SL643P-201ENST00000471845 PRIM1P49642 420 aaKnown RBP8.37□□□□□ -1.07
RN7SL643P-201ENST00000471845 RIPK4P57078 832 aa8.37□□□□□ -1.07
RN7SL643P-201ENST00000471845 SF3B2Q13435 895 aaKnown RBP8.37□□□□□ -1.07
RN7SL643P-201ENST00000471845 FAM9BQ8IZU0 186 aa8.37□□□□□ -1.07
RN7SL643P-201ENST00000471845 IL17REQ8NFR9 667 aa8.37□□□□□ -1.07
RN7SL643P-201ENST00000471845 SMARCC1Q92922 1105 aaPredicted RBP8.37□□□□□ -1.07
RN7SL643P-201ENST00000471845 SLC52A2Q9HAB3 445 aa8.37□□□□□ -1.07
RN7SL643P-201ENST00000471845 TMOD3Q9NYL9 352 aa8.37□□□□□ -1.07
RN7SL643P-201ENST00000471845 KDM6AO15550 1401 aaPredicted RBP8.37□□□□□ -1.07
RN7SL643P-201ENST00000471845 SBF2Q86WG5 1849 aa8.36□□□□□ -1.07
RN7SL643P-201ENST00000471845 SCN11AQ9UI33 1791 aa8.36□□□□□ -1.07
RN7SL643P-201ENST00000471845 APAF1O14727 1248 aa8.36□□□□□ -1.07
RN7SL643P-201ENST00000471845 CABP4P57796 275 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms