RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 ADH1AP07327 375 aa5.53□□□□□ -1.52
SCN3A-207ENST00000471697 MX2P20592 715 aa5.53□□□□□ -1.52
SCN3A-207ENST00000471697 MAP2K3P46734 347 aa5.53□□□□□ -1.52
SCN3A-207ENST00000471697 INTS6LQ5JSJ4 861 aaKnown RBP5.53□□□□□ -1.52
SCN3A-207ENST00000471697 CD163Q86VB7 1156 aa5.53□□□□□ -1.52
SCN3A-207ENST00000471697 KDF1Q8NAX2 398 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-207ENST00000471697 TRERF1Q96PN7 1200 aa5.53□□□□□ -1.52
SCN3A-207ENST00000471697 OXCT2Q9BYC2 517 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-207ENST00000471697 SHISA8B8ZZ34 492 aa5.52□□□□□ -1.53
SCN3A-207ENST00000471697 PTGIRP43119 386 aa5.52□□□□□ -1.53
SCN3A-207ENST00000471697 RNF144AP50876 292 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-207ENST00000471697 LINC00114Q6XXX2 140 aa5.52□□□□□ -1.53
SCN3A-207ENST00000471697 GTPBP3Q969Y2 492 aaKnown RBP5.52□□□□□ -1.53
SCN3A-207ENST00000471697 CARD14Q9BXL6 1004 aa5.52□□□□□ -1.53
SCN3A-207ENST00000471697 TBC1D2Q9BYX2 928 aa5.52□□□□□ -1.53
SCN3A-207ENST00000471697 SEMA6BQ9H3T3 888 aa5.52□□□□□ -1.53
SCN3A-207ENST00000471697 PIK3R2O00459 728 aa5.51□□□□□ -1.53
SCN3A-207ENST00000471697 HOXB4P17483 251 aaPredicted RBP5.51□□□□□ -1.53
SCN3A-207ENST00000471697 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.51□□□□□ -1.53
SCN3A-207ENST00000471697 SLC10A4Q96EP9 437 aa5.51□□□□□ -1.53
SCN3A-207ENST00000471697 GOLGA2P5Q9HBQ8 144 aa5.51□□□□□ -1.53
SCN3A-207ENST00000471697 DYRK1BQ9Y463 629 aa5.51□□□□□ -1.53
SCN3A-207ENST00000471697 GRIN2CQ14957 1233 aa5.5□□□□□ -1.53
SCN3A-207ENST00000471697 PDXDC2PQ6P474 469 aa5.5□□□□□ -1.53
SCN3A-207ENST00000471697 GDF2Q9UK05 429 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-207ENST00000471697 LILRA1O75019 489 aa5.49□□□□□ -1.53
SCN3A-207ENST00000471697 GPC1P35052 558 aa5.49□□□□□ -1.53
SCN3A-207ENST00000471697 CHRNA4P43681 627 aa5.49□□□□□ -1.53
SCN3A-207ENST00000471697 BRPF1P55201 1214 aaPredicted RBP5.49□□□□□ -1.53
SCN3A-207ENST00000471697 FOXD4L6Q3SYB3 417 aaPredicted RBP5.49□□□□□ -1.53
SCN3A-207ENST00000471697 FOXD4L3Q6VB84 417 aaPredicted RBP5.49□□□□□ -1.53
SCN3A-207ENST00000471697 C1orf229Q6ZS94 237 aaPredicted RBP5.49□□□□□ -1.53
SCN3A-207ENST00000471697 BEGAINQ9BUH8 593 aa5.49□□□□□ -1.53
SCN3A-207ENST00000471697 SUV39H2Q9H5I1 410 aa5.49□□□□□ -1.53
SCN3A-207ENST00000471697 GNB5O14775 395 aa5.48□□□□□ -1.53
SCN3A-207ENST00000471697 RHOQP17081 205 aa5.48□□□□□ -1.53
SCN3A-207ENST00000471697 AMHR2Q16671 573 aa5.48□□□□□ -1.53
SCN3A-207ENST00000471697 TUSC1Q2TAM9 212 aa5.48□□□□□ -1.53
SCN3A-207ENST00000471697 ARTNQ5T4W7 220 aa5.48□□□□□ -1.53
SCN3A-207ENST00000471697 RIPOR1Q6ZS17 1223 aa5.48□□□□□ -1.53
SCN3A-207ENST00000471697 PRICKLE2Q7Z3G6 844 aa5.48□□□□□ -1.53
SCN3A-207ENST00000471697 ZNF784Q8NCA9 323 aaPredicted RBP5.48□□□□□ -1.53
SCN3A-207ENST00000471697 CABLES1Q8TDN4 633 aa5.48□□□□□ -1.53
SCN3A-207ENST00000471697 ARHGAP9Q9BRR9 750 aa5.48□□□□□ -1.53
SCN3A-207ENST00000471697 CFHR5Q9BXR6 569 aa5.48□□□□□ -1.53
SCN3A-207ENST00000471697 ADD1P35611 737 aaKnown RBP5.47□□□□□ -1.53
SCN3A-207ENST00000471697 EDARADDQ8WWZ3 215 aa5.47□□□□□ -1.53
SCN3A-207ENST00000471697 ZFP64Q9NPA5 681 aa5.47□□□□□ -1.53
SCN3A-207ENST00000471697 DOC2BQ14184 412 aa5.46□□□□□ -1.54
SCN3A-207ENST00000471697 GIGYF2Q6Y7W6 1299 aaKnown RBP5.46□□□□□ -1.54
SCN3A-207ENST00000471697 RIC3Q7Z5B4 369 aa5.46□□□□□ -1.54
SCN3A-207ENST00000471697 KLRG1Q96E93 195 aa5.46□□□□□ -1.54
SCN3A-207ENST00000471697 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
SCN3A-207ENST00000471697 RRAGCQ9HB90 399 aa5.46□□□□□ -1.54
SCN3A-207ENST00000471697 TMPRSS4Q9NRS4 437 aa5.46□□□□□ -1.54
SCN3A-207ENST00000471697 NOP53Q9NZM5 478 aaKnown RBP5.46□□□□□ -1.54
SCN3A-207ENST00000471697 SCO2A0A1W2PP80 73 aa5.45□□□□□ -1.54
SCN3A-207ENST00000471697 WDR44Q5JSH3 913 aa5.45□□□□□ -1.54
SCN3A-207ENST00000471697 GOLGA6L1Q8N7Z2 621 aa5.45□□□□□ -1.54
SCN3A-207ENST00000471697 ZMYND15Q9H091 742 aa5.45□□□□□ -1.54
SCN3A-207ENST00000471697 ZC3H4Q9UPT8 1303 aaKnown RBP5.45□□□□□ -1.54
SCN3A-207ENST00000471697 LOC105371045A0A1W2PR82 267 aa5.44□□□□□ -1.54
SCN3A-207ENST00000471697 LILRB3O75022 631 aa5.44□□□□□ -1.54
SCN3A-207ENST00000471697 TTLL12Q14166 644 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-207ENST00000471697 RSPO4Q2I0M5 234 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-207ENST00000471697 NBPF20Q3BBV1 942 aa5.44□□□□□ -1.54
SCN3A-207ENST00000471697 HELBQ8NG08 1087 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-207ENST00000471697 NUCKS1Q9H1E3 243 aaKnown RBP5.44□□□□□ -1.54
SCN3A-207ENST00000471697 CCDC9Q9Y3X0 531 aaKnown RBP5.44□□□□□ -1.54
SCN3A-207ENST00000471697 NKAPLQ5M9Q1 402 aa5.43□□□□□ -1.54
SCN3A-207ENST00000471697 SLCO4C1Q6ZQN7 724 aa5.43□□□□□ -1.54
SCN3A-207ENST00000471697 ZBTB33Q86T24 672 aa5.43□□□□□ -1.54
SCN3A-207ENST00000471697 TSC1Q92574 1164 aa5.43□□□□□ -1.54
SCN3A-207ENST00000471697 TRIM52Q96A61 297 aa5.43□□□□□ -1.54
SCN3A-207ENST00000471697 GPSM3Q9Y4H4 160 aa5.43□□□□□ -1.54
SCN3A-207ENST00000471697 ERVH48-1M5A8F1 160 aa5.42□□□□□ -1.54
SCN3A-207ENST00000471697 GATA4P43694 442 aa5.42□□□□□ -1.54
SCN3A-207ENST00000471697 DGKGP49619 791 aa5.42□□□□□ -1.54
SCN3A-207ENST00000471697 QPCTQ16769 361 aa5.42□□□□□ -1.54
SCN3A-207ENST00000471697 ZC3H15Q8WU90 426 aaKnown RBP5.42□□□□□ -1.54
SCN3A-207ENST00000471697 GAS2L1Q99501 681 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-207ENST00000471697 OCSTAMPQ9BR26 566 aa5.42□□□□□ -1.54
SCN3A-207ENST00000471697 RSPH6AQ9H0K4 717 aa5.42□□□□□ -1.54
SCN3A-207ENST00000471697 FKBPLQ9UIM3 349 aa5.42□□□□□ -1.54
SCN3A-207ENST00000471697 ESPNB1AK53 854 aa5.41□□□□□ -1.54
SCN3A-207ENST00000471697 SPATA31C2B4DYI2 1134 aa5.41□□□□□ -1.54
SCN3A-207ENST00000471697 F11P03951 625 aa5.41□□□□□ -1.54
SCN3A-207ENST00000471697 THBS1P07996 1170 aa5.41□□□□□ -1.54
SCN3A-207ENST00000471697 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
SCN3A-207ENST00000471697 NBPF11Q86T75 865 aa5.41□□□□□ -1.54
SCN3A-207ENST00000471697 PHF24Q9UPV7 400 aa5.41□□□□□ -1.54
SCN3A-207ENST00000471697 SHROOM4Q9ULL8 1493 aa5.4□□□□□ -1.54
SCN3A-207ENST00000471697 NUTM2BA6NNL0 878 aaPredicted RBP5.4□□□□□ -1.54
SCN3A-207ENST00000471697 NUTM2EB1AL46 878 aaPredicted RBP5.4□□□□□ -1.54
SCN3A-207ENST00000471697 ZMYND10O75800 440 aa5.4□□□□□ -1.54
SCN3A-207ENST00000471697 POU4F2Q12837 409 aa5.4□□□□□ -1.54
SCN3A-207ENST00000471697 CSPP1Q1MSJ5 1256 aa5.4□□□□□ -1.54
SCN3A-207ENST00000471697 NUTM2DQ5VT03 806 aaPredicted RBP5.4□□□□□ -1.54
SCN3A-207ENST00000471697 NBPF10Q6P3W6 841 aaKnown RBP5.4□□□□□ -1.54
SCN3A-207ENST00000471697 NUTM2AQ8IVF1 878 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms