RNA–Protein interactions for RNA: ENST00000471474.5

SEMA3A-206, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 688 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-206ENST00000471474 ATP9BO43861 1147 aa9.83□□□□□ -0.84
SEMA3A-206ENST00000471474 ERVK-9P63128 1117 aa9.83□□□□□ -0.84
SEMA3A-206ENST00000471474 ZNF787Q6DD87 383 aa9.83□□□□□ -0.84
SEMA3A-206ENST00000471474 Q6ZVU0 165 aa9.83□□□□□ -0.84
SEMA3A-206ENST00000471474 DEPDC4Q8N2C3 294 aa9.83□□□□□ -0.84
SEMA3A-206ENST00000471474 PHTF2Q8N3S3 785 aa9.83□□□□□ -0.84
SEMA3A-206ENST00000471474 CDCA7Q9BWT1 371 aaPredicted RBP9.83□□□□□ -0.84
SEMA3A-206ENST00000471474 ZNF395Q9H8N7 513 aaPredicted RBP9.83□□□□□ -0.84
SEMA3A-206ENST00000471474 ARID3CA6NKF2 412 aa9.82□□□□□ -0.84
SEMA3A-206ENST00000471474 USP17L5A8MUK1 530 aa9.82□□□□□ -0.84
SEMA3A-206ENST00000471474 TRIM50Q86XT4 487 aa9.82□□□□□ -0.84
SEMA3A-206ENST00000471474 ZFP42Q96MM3 310 aa9.82□□□□□ -0.84
SEMA3A-206ENST00000471474 TFIP11Q9UBB9 837 aaKnown RBP9.82□□□□□ -0.84
SEMA3A-206ENST00000471474 MAN1A2O60476 641 aa9.81□□□□□ -0.84
SEMA3A-206ENST00000471474 NCOA4Q13772 614 aa9.81□□□□□ -0.84
SEMA3A-206ENST00000471474 ESCO1Q5FWF5 840 aa9.81□□□□□ -0.84
SEMA3A-206ENST00000471474 TBC1D9Q6ZT07 1266 aa9.81□□□□□ -0.84
SEMA3A-206ENST00000471474 ADAMTS19Q8TE59 1207 aa9.81□□□□□ -0.84
SEMA3A-206ENST00000471474 DACH1Q9UI36 760 aa9.81□□□□□ -0.84
SEMA3A-206ENST00000471474 SERPINA10Q9UK55 444 aa9.81□□□□□ -0.84
SEMA3A-206ENST00000471474 LILRA1O75019 489 aa9.8□□□□□ -0.84
SEMA3A-206ENST00000471474 LMOD1P29536 600 aaPredicted RBP9.8□□□□□ -0.84
SEMA3A-206ENST00000471474 ADD1P35611 737 aaKnown RBP9.8□□□□□ -0.84
SEMA3A-206ENST00000471474 PTGIRP43119 386 aa9.8□□□□□ -0.84
SEMA3A-206ENST00000471474 SCTRP47872 440 aa9.8□□□□□ -0.84
SEMA3A-206ENST00000471474 ATP1A2P50993 1020 aa9.8□□□□□ -0.84
SEMA3A-206ENST00000471474 TSGA10IPQ3SY00 556 aa9.8□□□□□ -0.84
SEMA3A-206ENST00000471474 PPP1R12CQ9BZL4 782 aa9.8□□□□□ -0.84
SEMA3A-206ENST00000471474 GMPR2Q9P2T1 348 aaKnown RBP9.8□□□□□ -0.84
SEMA3A-206ENST00000471474 USP17L3A6NCW0 530 aa9.79□□□□□ -0.84
SEMA3A-206ENST00000471474 USP17L4A6NCW7 530 aa9.79□□□□□ -0.84
SEMA3A-206ENST00000471474 PALM3A6NDB9 673 aaPredicted RBP9.79□□□□□ -0.84
SEMA3A-206ENST00000471474 GNRH1P01148 92 aa9.79□□□□□ -0.84
SEMA3A-206ENST00000471474 USP17L2Q6R6M4 530 aa9.79□□□□□ -0.84
SEMA3A-206ENST00000471474 USP17L1Q7RTZ2 530 aa9.79□□□□□ -0.84
SEMA3A-206ENST00000471474 TIMELESSQ9UNS1 1208 aa9.79□□□□□ -0.84
SEMA3A-206ENST00000471474 RFX1P22670 979 aa9.78□□□□□ -0.84
SEMA3A-206ENST00000471474 SLC27A3Q5K4L6 730 aa9.78□□□□□ -0.84
SEMA3A-206ENST00000471474 LARP1Q6PKG0 1096 aaKnown RBP9.78□□□□□ -0.84
SEMA3A-206ENST00000471474 TRIM46Q7Z4K8 759 aa9.78□□□□□ -0.84
SEMA3A-206ENST00000471474 ARHGEF10LQ9HCE6 1279 aa9.78□□□□□ -0.84
SEMA3A-206ENST00000471474 TTLL8A6PVC2 850 aa9.77□□□□□ -0.85
SEMA3A-206ENST00000471474 INSM2Q96T92 566 aaPredicted RBP9.77□□□□□ -0.85
SEMA3A-206ENST00000471474 MKRN1Q9UHC7 482 aaKnown RBP9.77□□□□□ -0.85
SEMA3A-206ENST00000471474 SUPT5HO00267 1087 aaKnown RBP9.76□□□□□ -0.85
SEMA3A-206ENST00000471474 GTF2IP78347 998 aa9.76□□□□□ -0.85
SEMA3A-206ENST00000471474 UCN2Q96RP3 112 aa9.76□□□□□ -0.85
SEMA3A-206ENST00000471474 OSBPL3Q9H4L5 887 aa9.76□□□□□ -0.85
SEMA3A-206ENST00000471474 VRTNQ9H8Y1 702 aa9.76□□□□□ -0.85
SEMA3A-206ENST00000471474 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
SEMA3A-206ENST00000471474 FIGNL2A6NMB9 653 aa9.75□□□□□ -0.85
SEMA3A-206ENST00000471474 SPINT1O43278 529 aa9.75□□□□□ -0.85
SEMA3A-206ENST00000471474 PLEKHM2Q8IWE5 1019 aa9.75□□□□□ -0.85
SEMA3A-206ENST00000471474 TRIM47Q96LD4 638 aa9.75□□□□□ -0.85
SEMA3A-206ENST00000471474 RAB6BQ9NRW1 208 aa9.75□□□□□ -0.85
SEMA3A-206ENST00000471474 CHIC2Q9UKJ5 165 aa9.75□□□□□ -0.85
SEMA3A-206ENST00000471474 RASA1P20936 1047 aa9.74□□□□□ -0.85
SEMA3A-206ENST00000471474 MAFBQ9Y5Q3 323 aaPredicted RBP9.74□□□□□ -0.85
SEMA3A-206ENST00000471474 BACH1O14867 736 aa9.73□□□□□ -0.85
SEMA3A-206ENST00000471474 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.73□□□□□ -0.85
SEMA3A-206ENST00000471474 DNAAF2Q9NVR5 837 aaKnown RBP9.73□□□□□ -0.85
SEMA3A-206ENST00000471474 TMEM214Q6NUQ4 689 aaKnown RBP9.72□□□□□ -0.85
SEMA3A-206ENST00000471474 CNKSR1Q969H4 720 aa9.72□□□□□ -0.85
SEMA3A-206ENST00000471474 CTSOP43234 321 aaPredicted RBP9.71□□□□□ -0.86
SEMA3A-206ENST00000471474 GDF10P55107 478 aa9.71□□□□□ -0.86
SEMA3A-206ENST00000471474 CLN3Q13286 438 aa9.71□□□□□ -0.86
SEMA3A-206ENST00000471474 OGFOD1Q8N543 542 aa9.71□□□□□ -0.86
SEMA3A-206ENST00000471474 ARID3AQ99856 593 aa9.71□□□□□ -0.86
SEMA3A-206ENST00000471474 GNASQ5JWF2 1037 aa9.7□□□□□ -0.86
SEMA3A-206ENST00000471474 LYSMD3Q7Z3D4 306 aa9.7□□□□□ -0.86
SEMA3A-206ENST00000471474 CCDC82Q8N4S0 544 aa9.7□□□□□ -0.86
SEMA3A-206ENST00000471474 ZNF594Q96JF6 807 aaPredicted RBP9.7□□□□□ -0.86
SEMA3A-206ENST00000471474 ZSCAN10Q96SZ4 725 aaPredicted RBP9.7□□□□□ -0.86
SEMA3A-206ENST00000471474 ESYT1Q9BSJ8 1104 aa9.7□□□□□ -0.86
SEMA3A-206ENST00000471474 SERTAD1Q9UHV2 236 aa9.7□□□□□ -0.86
SEMA3A-206ENST00000471474 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
SEMA3A-206ENST00000471474 GPC1P35052 558 aa9.69□□□□□ -0.86
SEMA3A-206ENST00000471474 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
SEMA3A-206ENST00000471474 TLR1Q15399 786 aa9.69□□□□□ -0.86
SEMA3A-206ENST00000471474 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
SEMA3A-206ENST00000471474 CCDC102BQ68D86 513 aa9.69□□□□□ -0.86
SEMA3A-206ENST00000471474 PRICKLE2Q7Z3G6 844 aa9.69□□□□□ -0.86
SEMA3A-206ENST00000471474 LARGE2Q8N3Y3 721 aa9.69□□□□□ -0.86
SEMA3A-206ENST00000471474 TPCN2Q8NHX9 752 aa9.69□□□□□ -0.86
SEMA3A-206ENST00000471474 ACIN1Q9UKV3 1341 aaKnown RBP9.68□□□□□ -0.86
SEMA3A-206ENST00000471474 LCE2BO14633 110 aa9.68□□□□□ -0.86
SEMA3A-206ENST00000471474 INHAP05111 366 aa9.68□□□□□ -0.86
SEMA3A-206ENST00000471474 RNF144AP50876 292 aaPredicted RBP9.68□□□□□ -0.86
SEMA3A-206ENST00000471474 SOBPA7XYQ1 873 aa9.67□□□□□ -0.86
SEMA3A-206ENST00000471474 POTECB2RU33 542 aa9.67□□□□□ -0.86
SEMA3A-206ENST00000471474 CENPCQ03188 943 aa9.67□□□□□ -0.86
SEMA3A-206ENST00000471474 ETNK1Q9HBU6 452 aa9.67□□□□□ -0.86
SEMA3A-206ENST00000471474 CHMP3Q9Y3E7 222 aa9.67□□□□□ -0.86
SEMA3A-206ENST00000471474 XAGE2Q96GT9 111 aa9.66□□□□□ -0.86
SEMA3A-206ENST00000471474 HINFPQ9BQA5 517 aa9.66□□□□□ -0.86
SEMA3A-206ENST00000471474 PCDHGA11Q9Y5H2 935 aa9.66□□□□□ -0.86
SEMA3A-206ENST00000471474 CFAP70Q5T0N1 1121 aa9.65□□□□□ -0.86
SEMA3A-206ENST00000471474 KDF1Q8NAX2 398 aaPredicted RBP9.65□□□□□ -0.86
SEMA3A-206ENST00000471474 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
SEMA3A-206ENST00000471474 RNF217Q8TC41 542 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms