RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 GMCL1Q96IK5 515 aa7.57□□□□□ -1.2
HERC3-208ENST00000470815 RNF144AP50876 292 aaPredicted RBP7.56□□□□□ -1.2
HERC3-208ENST00000470815 RAB15P59190 212 aa7.56□□□□□ -1.2
HERC3-208ENST00000470815 CCDC125Q86Z20 511 aa7.56□□□□□ -1.2
HERC3-208ENST00000470815 SCARF2Q96GP6 870 aaPredicted RBP7.56□□□□□ -1.2
HERC3-208ENST00000470815 ATP1B4Q9UN42 357 aaPredicted RBP7.56□□□□□ -1.2
HERC3-208ENST00000470815 IGHA1P01876 353 aa7.55□□□□□ -1.2
HERC3-208ENST00000470815 GPC1P35052 558 aa7.55□□□□□ -1.2
HERC3-208ENST00000470815 RFC5P40937 340 aa7.55□□□□□ -1.2
HERC3-208ENST00000470815 MARSP56192 900 aaKnown RBP7.55□□□□□ -1.2
HERC3-208ENST00000470815 FOXK2Q01167 660 aa7.55□□□□□ -1.2
HERC3-208ENST00000470815 GAS6Q14393 721 aa7.55□□□□□ -1.2
HERC3-208ENST00000470815 TMEM132AQ24JP5 1023 aa7.55□□□□□ -1.2
HERC3-208ENST00000470815 IRS1P35568 1242 aa7.54□□□□□ -1.2
HERC3-208ENST00000470815 MAP3K10Q02779 954 aa7.54□□□□□ -1.2
HERC3-208ENST00000470815 CUEDC1Q9NWM3 386 aaPredicted RBP7.54□□□□□ -1.2
HERC3-208ENST00000470815 LYPD4Q6UWN0 246 aa7.53□□□□□ -1.2
HERC3-208ENST00000470815 TRIM22Q8IYM9 498 aa7.53□□□□□ -1.2
HERC3-208ENST00000470815 TRIM34Q9BYJ4 488 aa7.53□□□□□ -1.2
HERC3-208ENST00000470815 CYLDQ9NQC7 956 aa7.53□□□□□ -1.2
HERC3-208ENST00000470815 ZBBXA8MT70 800 aa7.52□□□□□ -1.21
HERC3-208ENST00000470815 ATP5J2-PTCD1G3V325 749 aa7.52□□□□□ -1.21
HERC3-208ENST00000470815 ZNF837Q96EG3 531 aaPredicted RBP7.52□□□□□ -1.21
HERC3-208ENST00000470815 MBIPQ9NS73 344 aa7.52□□□□□ -1.21
HERC3-208ENST00000470815 CELA2BP08218 269 aaPredicted RBP7.51□□□□□ -1.21
HERC3-208ENST00000470815 TMEM259Q4ZIN3 620 aa7.51□□□□□ -1.21
HERC3-208ENST00000470815 PCMTD1Q96MG8 357 aaPredicted RBP7.51□□□□□ -1.21
HERC3-208ENST00000470815 ENAMQ9NRM1 1142 aa7.51□□□□□ -1.21
HERC3-208ENST00000470815 ERVK-9P63128 1117 aa7.5□□□□□ -1.21
HERC3-208ENST00000470815 FOXR1Q6PIV2 292 aa7.5□□□□□ -1.21
HERC3-208ENST00000470815 PRICKLE2Q7Z3G6 844 aa7.5□□□□□ -1.21
HERC3-208ENST00000470815 DYRK1BQ9Y463 629 aa7.5□□□□□ -1.21
HERC3-208ENST00000470815 GPAT2Q6NUI2 795 aa7.49□□□□□ -1.21
HERC3-208ENST00000470815 H7C1W4 665 aa7.48□□□□□ -1.21
HERC3-208ENST00000470815 GIGYF1O75420 1035 aaPredicted RBP7.48□□□□□ -1.21
HERC3-208ENST00000470815 RHOQP17081 205 aa7.48□□□□□ -1.21
HERC3-208ENST00000470815 MCCD1P59942 119 aaPredicted RBP7.48□□□□□ -1.21
HERC3-208ENST00000470815 RNF20Q5VTR2 975 aa7.48□□□□□ -1.21
HERC3-208ENST00000470815 CC2D2BQ6DHV5 1058 aa7.48□□□□□ -1.21
HERC3-208ENST00000470815 ZNF592Q92610 1267 aa7.48□□□□□ -1.21
HERC3-208ENST00000470815 LRRC4BQ9NT99 713 aa7.48□□□□□ -1.21
HERC3-208ENST00000470815 PCDHB9Q9Y5E1 797 aa7.48□□□□□ -1.21
HERC3-208ENST00000470815 A0A1W2PRU2 124 aa7.47□□□□□ -1.21
HERC3-208ENST00000470815 MEN1O00255 615 aa7.47□□□□□ -1.21
HERC3-208ENST00000470815 FBXO45P0C2W1 286 aa7.47□□□□□ -1.21
HERC3-208ENST00000470815 DBN1Q16643 649 aa7.47□□□□□ -1.21
HERC3-208ENST00000470815 WDR44Q5JSH3 913 aa7.47□□□□□ -1.21
HERC3-208ENST00000470815 GJD4Q96KN9 370 aaPredicted RBP7.47□□□□□ -1.21
HERC3-208ENST00000470815 IGF1RP08069 1367 aa7.46□□□□□ -1.21
HERC3-208ENST00000470815 PHF20L1A8MW92 1017 aa7.46□□□□□ -1.22
HERC3-208ENST00000470815 SPATA31C2B4DYI2 1134 aa7.46□□□□□ -1.22
HERC3-208ENST00000470815 CLN3Q13286 438 aa7.46□□□□□ -1.22
HERC3-208ENST00000470815 CYP2U1Q7Z449 544 aa7.46□□□□□ -1.22
HERC3-208ENST00000470815 BCRP11274 1271 aa7.45□□□□□ -1.22
HERC3-208ENST00000470815 RIPOR1Q6ZS17 1223 aa7.45□□□□□ -1.22
HERC3-208ENST00000470815 NLRP3Q96P20 1036 aa7.45□□□□□ -1.22
HERC3-208ENST00000470815 TRERF1Q96PN7 1200 aa7.45□□□□□ -1.22
HERC3-208ENST00000470815 GRIP2Q9C0E4 1043 aa7.45□□□□□ -1.22
HERC3-208ENST00000470815 GPR25O00155 361 aa7.44□□□□□ -1.22
HERC3-208ENST00000470815 SOCS7O14512 581 aa7.44□□□□□ -1.22
HERC3-208ENST00000470815 SLC27A3Q5K4L6 730 aa7.44□□□□□ -1.22
HERC3-208ENST00000470815 NBPF10Q6P3W6 841 aaKnown RBP7.44□□□□□ -1.22
HERC3-208ENST00000470815 NBPF15Q8N660 670 aa7.44□□□□□ -1.22
HERC3-208ENST00000470815 TRAK2O60296 914 aa7.43□□□□□ -1.22
HERC3-208ENST00000470815 POU4F2Q12837 409 aa7.43□□□□□ -1.22
HERC3-208ENST00000470815 NR1H3Q13133 447 aa7.43□□□□□ -1.22
HERC3-208ENST00000470815 PODNQ7Z5L7 613 aa7.43□□□□□ -1.22
HERC3-208ENST00000470815 BEND7Q8N7W2 519 aaPredicted RBP7.43□□□□□ -1.22
HERC3-208ENST00000470815 GTPBP3Q969Y2 492 aaKnown RBP7.43□□□□□ -1.22
HERC3-208ENST00000470815 NSFL1CQ9UNZ2 370 aaKnown RBP7.43□□□□□ -1.22
HERC3-208ENST00000470815 ACDQ96AP0 544 aa7.42□□□□□ -1.22
HERC3-208ENST00000470815 ZNF330Q9Y3S2 320 aaPredicted RBP7.42□□□□□ -1.22
HERC3-208ENST00000470815 MX2P20592 715 aa7.41□□□□□ -1.22
HERC3-208ENST00000470815 SCTRP47872 440 aa7.41□□□□□ -1.22
HERC3-208ENST00000470815 TAS1R3Q7RTX0 852 aa7.41□□□□□ -1.22
HERC3-208ENST00000470815 BANK1Q8NDB2 785 aa7.41□□□□□ -1.22
HERC3-208ENST00000470815 DCAF5Q96JK2 942 aa7.41□□□□□ -1.22
HERC3-208ENST00000470815 GAS2L1Q99501 681 aaPredicted RBP7.41□□□□□ -1.22
HERC3-208ENST00000470815 OSBPL3Q9H4L5 887 aa7.41□□□□□ -1.22
HERC3-208ENST00000470815 TIMMDC1Q9NPL8 285 aa7.41□□□□□ -1.22
HERC3-208ENST00000470815 CNTNAP5Q8WYK1 1306 aa7.41□□□□□ -1.22
HERC3-208ENST00000470815 WASLO00401 505 aaPredicted RBP7.4□□□□□ -1.22
HERC3-208ENST00000470815 MSTNO14793 375 aa7.4□□□□□ -1.22
HERC3-208ENST00000470815 F11P03951 625 aa7.4□□□□□ -1.22
HERC3-208ENST00000470815 PLA2G4EQ3MJ16 856 aa7.4□□□□□ -1.22
HERC3-208ENST00000470815 NEDD1Q8NHV4 660 aa7.4□□□□□ -1.22
HERC3-208ENST00000470815 NUCKS1Q9H1E3 243 aaKnown RBP7.4□□□□□ -1.22
HERC3-208ENST00000470815 ARHGEF10LQ9HCE6 1279 aa7.4□□□□□ -1.22
HERC3-208ENST00000470815 PCDHB11Q9Y5F2 797 aa7.4□□□□□ -1.22
HERC3-208ENST00000470815 GNRH1P01148 92 aa7.39□□□□□ -1.23
HERC3-208ENST00000470815 MAP2K3P46734 347 aa7.39□□□□□ -1.23
HERC3-208ENST00000470815 CFHR5Q9BXR6 569 aa7.39□□□□□ -1.23
HERC3-208ENST00000470815 OIP5O43482 229 aa7.38□□□□□ -1.23
HERC3-208ENST00000470815 GPR37L1O60883 481 aa7.38□□□□□ -1.23
HERC3-208ENST00000470815 ESF1Q9H501 851 aaKnown RBP7.38□□□□□ -1.23
HERC3-208ENST00000470815 ITGB2P05107 769 aa7.37□□□□□ -1.23
HERC3-208ENST00000470815 SPOCK3Q9BQ16 436 aa7.37□□□□□ -1.23
HERC3-208ENST00000470815 ESYT1Q9BSJ8 1104 aa7.37□□□□□ -1.23
HERC3-208ENST00000470815 OXCT2Q9BYC2 517 aaPredicted RBP7.37□□□□□ -1.23
HERC3-208ENST00000470815 NDUFB9Q9Y6M9 179 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms