RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 ATP2B1P20020 1258 aa16.85■□□□□ 0.29
HDAC7-219ENST00000470668 BRPF1P55201 1214 aaPredicted RBP16.85■□□□□ 0.29
HDAC7-219ENST00000470668 TSHZ3Q63HK5 1081 aa16.85■□□□□ 0.29
HDAC7-219ENST00000470668 TIGD1Q96MW7 591 aa16.85■□□□□ 0.29
HDAC7-219ENST00000470668 VGLL3A8MV65 326 aa16.84■□□□□ 0.29
HDAC7-219ENST00000470668 URI1O94763 535 aaPredicted RBP16.84■□□□□ 0.29
HDAC7-219ENST00000470668 STK38Q15208 465 aa16.84■□□□□ 0.29
HDAC7-219ENST00000470668 HSP90AB4PQ58FF6 505 aa16.84■□□□□ 0.29
HDAC7-219ENST00000470668 OLFM4Q6UX06 510 aa16.84■□□□□ 0.29
HDAC7-219ENST00000470668 RPAP2Q8IXW5 612 aaPredicted RBP16.84■□□□□ 0.29
HDAC7-219ENST00000470668 STK11IPQ8N1F8 1099 aa16.84■□□□□ 0.29
HDAC7-219ENST00000470668 TFIP11Q9UBB9 837 aaKnown RBP16.84■□□□□ 0.29
HDAC7-219ENST00000470668 CASTP20810 708 aaKnown RBP16.84■□□□□ 0.29
HDAC7-219ENST00000470668 TRIM29Q14134 588 aa16.84■□□□□ 0.29
HDAC7-219ENST00000470668 TSPYL1Q9H0U9 437 aa16.84■□□□□ 0.29
HDAC7-219ENST00000470668 GPRASP1Q5JY77 1395 aa16.83■□□□□ 0.29
HDAC7-219ENST00000470668 HS1BP3Q53T59 392 aa16.83■□□□□ 0.29
HDAC7-219ENST00000470668 TMX3Q96JJ7 454 aa16.83■□□□□ 0.29
HDAC7-219ENST00000470668 PDRG1Q9NUG6 133 aa16.83■□□□□ 0.29
HDAC7-219ENST00000470668 DDX11Q96FC9 970 aa16.83■□□□□ 0.28
HDAC7-219ENST00000470668 GTPBP4Q9BZE4 634 aaKnown RBP16.83■□□□□ 0.28
HDAC7-219ENST00000470668 UGGT2Q9NYU1 1516 aa16.83■□□□□ 0.28
HDAC7-219ENST00000470668 CCDC186Q7Z3E2 898 aa16.83■□□□□ 0.28
HDAC7-219ENST00000470668 NUP153P49790 1475 aaKnown RBP16.83■□□□□ 0.28
HDAC7-219ENST00000470668 NUTM1Q86Y26 1132 aa16.82■□□□□ 0.28
HDAC7-219ENST00000470668 DHX37Q8IY37 1157 aaKnown RBP16.82■□□□□ 0.28
HDAC7-219ENST00000470668 CEP57L1Q8IYX8 460 aa16.82■□□□□ 0.28
HDAC7-219ENST00000470668 CCDC102AQ96A19 550 aa16.82■□□□□ 0.28
HDAC7-219ENST00000470668 CHMP4CQ96CF2 233 aa16.82■□□□□ 0.28
HDAC7-219ENST00000470668 DEF6Q9H4E7 631 aa16.82■□□□□ 0.28
HDAC7-219ENST00000470668 DCTN1Q14203 1278 aa16.82■□□□□ 0.28
HDAC7-219ENST00000470668 ZBTB9Q96C00 473 aa16.82■□□□□ 0.28
HDAC7-219ENST00000470668 NUCB1Q02818 461 aa16.82■□□□□ 0.28
HDAC7-219ENST00000470668 CDK19Q9BWU1 502 aa16.82■□□□□ 0.28
HDAC7-219ENST00000470668 FBLN1P23142 703 aa16.81■□□□□ 0.28
HDAC7-219ENST00000470668 KRT222Q8N1A0 295 aa16.81■□□□□ 0.28
HDAC7-219ENST00000470668 HDAC1Q13547 482 aaPredicted RBP16.81■□□□□ 0.28
HDAC7-219ENST00000470668 NSD3Q9BZ95 1437 aa16.81■□□□□ 0.28
HDAC7-219ENST00000470668 NOL10Q9BSC4 688 aaKnown RBP16.81■□□□□ 0.28
HDAC7-219ENST00000470668 PARD3Q8TEW0 1356 aa16.8■□□□□ 0.28
HDAC7-219ENST00000470668 SFPQP23246 707 aaKnown RBP eCLIP16.8■□□□□ 0.28
HDAC7-219ENST00000470668 U2AF2P26368 475 aaKnown RBP eCLIP16.8■□□□□ 0.28
HDAC7-219ENST00000470668 RRS1Q15050 365 aaKnown RBP16.8■□□□□ 0.28
HDAC7-219ENST00000470668 HSP90AB3PQ58FF7 597 aa16.8■□□□□ 0.28
HDAC7-219ENST00000470668 RDXP35241 583 aaKnown RBP16.8■□□□□ 0.28
HDAC7-219ENST00000470668 AIMP1Q12904 312 aaKnown RBP16.8■□□□□ 0.28
HDAC7-219ENST00000470668 BLOC1S2Q6QNY1 142 aa16.8■□□□□ 0.28
HDAC7-219ENST00000470668 WAPLQ7Z5K2 1190 aa16.8■□□□□ 0.28
HDAC7-219ENST00000470668 ANKRD20A12PQ8NF67 263 aa16.8■□□□□ 0.28
HDAC7-219ENST00000470668 ZNF165P49910 485 aa16.8■□□□□ 0.28
HDAC7-219ENST00000470668 CAGE1Q8TC20 777 aa16.8■□□□□ 0.28
HDAC7-219ENST00000470668 NEUROD6Q96NK8 337 aa16.79■□□□□ 0.28
HDAC7-219ENST00000470668 HOOK1Q9UJC3 728 aaKnown RBP16.79■□□□□ 0.28
HDAC7-219ENST00000470668 CCP110O43303 1012 aa16.79■□□□□ 0.28
HDAC7-219ENST00000470668 SULT6B1Q6IMI4 303 aa16.79■□□□□ 0.28
HDAC7-219ENST00000470668 USP48Q86UV5 1035 aa16.79■□□□□ 0.28
HDAC7-219ENST00000470668 IBSPP21815 317 aaPredicted RBP16.79■□□□□ 0.28
HDAC7-219ENST00000470668 SLC26A8Q96RN1 970 aa16.79■□□□□ 0.28
HDAC7-219ENST00000470668 CLSTN1O94985 981 aa16.79■□□□□ 0.28
HDAC7-219ENST00000470668 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
HDAC7-219ENST00000470668 TMX1Q9H3N1 280 aa16.79■□□□□ 0.28
HDAC7-219ENST00000470668 ERCC4Q92889 916 aaPredicted RBP16.78■□□□□ 0.28
HDAC7-219ENST00000470668 MX1P20591 662 aa16.78■□□□□ 0.28
HDAC7-219ENST00000470668 FAM193AP78312 1265 aa16.78■□□□□ 0.28
HDAC7-219ENST00000470668 AKAP17AQ02040 695 aaKnown RBP16.78■□□□□ 0.28
HDAC7-219ENST00000470668 UVSSAQ2YD98 709 aa16.78■□□□□ 0.28
HDAC7-219ENST00000470668 C16orf71Q8IYS4 520 aaPredicted RBP16.78■□□□□ 0.28
HDAC7-219ENST00000470668 CNPY2Q9Y2B0 182 aa16.78■□□□□ 0.28
HDAC7-219ENST00000470668 STX6O43752 255 aa16.77■□□□□ 0.28
HDAC7-219ENST00000470668 CEP135Q66GS9 1140 aa16.77■□□□□ 0.28
HDAC7-219ENST00000470668 TRDNQ13061 729 aa16.77■□□□□ 0.28
HDAC7-219ENST00000470668 MIS18AQ9NYP9 233 aa16.77■□□□□ 0.28
HDAC7-219ENST00000470668 ATP10BO94823 1461 aa16.77■□□□□ 0.27
HDAC7-219ENST00000470668 SDSP20132 328 aa16.77■□□□□ 0.27
HDAC7-219ENST00000470668 PPP6R1Q9UPN7 881 aa16.77■□□□□ 0.27
HDAC7-219ENST00000470668 NAP1L1P55209 391 aaKnown RBP16.76■□□□□ 0.27
HDAC7-219ENST00000470668 CFAP100Q494V2 611 aa16.76■□□□□ 0.27
HDAC7-219ENST00000470668 FBXO31Q5XUX0 539 aaPredicted RBP16.76■□□□□ 0.27
HDAC7-219ENST00000470668 PRPF40BQ6NWY9 871 aaKnown RBP16.76■□□□□ 0.27
HDAC7-219ENST00000470668 NFXL1Q6ZNB6 911 aa16.76■□□□□ 0.27
HDAC7-219ENST00000470668 GPATCH11Q8N954 259 aa16.76■□□□□ 0.27
HDAC7-219ENST00000470668 DNAJC2Q99543 621 aaKnown RBP16.76■□□□□ 0.27
HDAC7-219ENST00000470668 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
HDAC7-219ENST00000470668 F6X3S4 739 aa16.76■□□□□ 0.27
HDAC7-219ENST00000470668 SRGAP3O43295 1099 aa16.76■□□□□ 0.27
HDAC7-219ENST00000470668 RALYLQ86SE5 291 aaKnown RBP16.76■□□□□ 0.27
HDAC7-219ENST00000470668 ZNF396Q96N95 335 aaPredicted RBP16.76■□□□□ 0.27
HDAC7-219ENST00000470668 PER1O15534 1290 aaPredicted RBP16.76■□□□□ 0.27
HDAC7-219ENST00000470668 NLRP6P59044 892 aa16.76■□□□□ 0.27
HDAC7-219ENST00000470668 UBE2HP62256 183 aa16.76■□□□□ 0.27
HDAC7-219ENST00000470668 EIF3JO75822 258 aaKnown RBP16.75■□□□□ 0.27
HDAC7-219ENST00000470668 TTC22Q5TAA0 569 aa16.75■□□□□ 0.27
HDAC7-219ENST00000470668 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
HDAC7-219ENST00000470668 LMAN1P49257 510 aa16.75■□□□□ 0.27
HDAC7-219ENST00000470668 CCT4P50991 539 aaKnown RBP16.75■□□□□ 0.27
HDAC7-219ENST00000470668 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
HDAC7-219ENST00000470668 ERLIN1O75477 346 aa16.75■□□□□ 0.27
HDAC7-219ENST00000470668 BMS1Q14692 1282 aaKnown RBP16.75■□□□□ 0.27
HDAC7-219ENST00000470668 PTGS1P23219 599 aa16.74■□□□□ 0.27
HDAC7-219ENST00000470668 WASHC4Q2M389 1173 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms