RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ZFP42Q96MM3 310 aa8.06□□□□□ -1.12
BRCA2-202ENST00000470094 PURBQ96QR8 312 aaKnown RBP8.06□□□□□ -1.12
BRCA2-202ENST00000470094 GMPR2Q9P2T1 348 aaKnown RBP8.06□□□□□ -1.12
BRCA2-202ENST00000470094 UCN2Q96RP3 112 aa8.05□□□□□ -1.12
BRCA2-202ENST00000470094 USP17L5A8MUK1 530 aa8.04□□□□□ -1.12
BRCA2-202ENST00000470094 ATP5J2-PTCD1G3V325 749 aa8.04□□□□□ -1.12
BRCA2-202ENST00000470094 EML3Q32P44 896 aa8.04□□□□□ -1.12
BRCA2-202ENST00000470094 OSBPL3Q9H4L5 887 aa8.04□□□□□ -1.12
BRCA2-202ENST00000470094 C11orf95C9JLR9 678 aaPredicted RBP8.03□□□□□ -1.12
BRCA2-202ENST00000470094 ATP9BO43861 1147 aa8.03□□□□□ -1.12
BRCA2-202ENST00000470094 LZTS3O60299 673 aaPredicted RBP8.03□□□□□ -1.12
BRCA2-202ENST00000470094 PTGIRP43119 386 aa8.03□□□□□ -1.12
BRCA2-202ENST00000470094 ZNF787Q6DD87 383 aa8.03□□□□□ -1.12
BRCA2-202ENST00000470094 TBC1D9Q6ZT07 1266 aa8.03□□□□□ -1.12
BRCA2-202ENST00000470094 TRIM47Q96LD4 638 aa8.03□□□□□ -1.12
BRCA2-202ENST00000470094 SPINT1O43278 529 aa8.02□□□□□ -1.13
BRCA2-202ENST00000470094 NCOA4Q13772 614 aa8.02□□□□□ -1.13
BRCA2-202ENST00000470094 USP17L3A6NCW0 530 aa8.01□□□□□ -1.13
BRCA2-202ENST00000470094 USP17L4A6NCW7 530 aa8.01□□□□□ -1.13
BRCA2-202ENST00000470094 POTECB2RU33 542 aa8.01□□□□□ -1.13
BRCA2-202ENST00000470094 USP17L2Q6R6M4 530 aa8.01□□□□□ -1.13
BRCA2-202ENST00000470094 USP17L1Q7RTZ2 530 aa8.01□□□□□ -1.13
BRCA2-202ENST00000470094 DEPDC4Q8N2C3 294 aa8.01□□□□□ -1.13
BRCA2-202ENST00000470094 KDF1Q8NAX2 398 aaPredicted RBP8.01□□□□□ -1.13
BRCA2-202ENST00000470094 ZNF395Q9H8N7 513 aaPredicted RBP8.01□□□□□ -1.13
BRCA2-202ENST00000470094 NOD1Q9Y239 953 aa8.01□□□□□ -1.13
BRCA2-202ENST00000470094 PALM3A6NDB9 673 aaPredicted RBP8□□□□□ -1.13
BRCA2-202ENST00000470094 GNRH1P01148 92 aa8□□□□□ -1.13
BRCA2-202ENST00000470094 PLEKHM2Q8IWE5 1019 aa8□□□□□ -1.13
BRCA2-202ENST00000470094 INSM2Q96T92 566 aaPredicted RBP8□□□□□ -1.13
BRCA2-202ENST00000470094 PPP1R12CQ9BZL4 782 aa8□□□□□ -1.13
BRCA2-202ENST00000470094 POLMQ9NP87 494 aaPredicted RBP8□□□□□ -1.13
BRCA2-202ENST00000470094 TFIP11Q9UBB9 837 aaKnown RBP8□□□□□ -1.13
BRCA2-202ENST00000470094 TTLL8A6PVC2 850 aa7.99□□□□□ -1.13
BRCA2-202ENST00000470094 MEN1O00255 615 aa7.99□□□□□ -1.13
BRCA2-202ENST00000470094 SNRPBP14678 240 aaKnown RBP7.99□□□□□ -1.13
BRCA2-202ENST00000470094 ARHGEF10LQ9HCE6 1279 aa7.99□□□□□ -1.13
BRCA2-202ENST00000470094 TIMELESSQ9UNS1 1208 aa7.99□□□□□ -1.13
BRCA2-202ENST00000470094 A0A1W2PRU2 124 aa7.98□□□□□ -1.13
BRCA2-202ENST00000470094 ARID3CA6NKF2 412 aa7.98□□□□□ -1.13
BRCA2-202ENST00000470094 MAN1A2O60476 641 aa7.98□□□□□ -1.13
BRCA2-202ENST00000470094 NLRP3Q96P20 1036 aa7.98□□□□□ -1.13
BRCA2-202ENST00000470094 MAFBQ9Y5Q3 323 aaPredicted RBP7.98□□□□□ -1.13
BRCA2-202ENST00000470094 SOS2Q07890 1332 aaPredicted RBP7.98□□□□□ -1.13
BRCA2-202ENST00000470094 CTSOP43234 321 aaPredicted RBP7.97□□□□□ -1.13
BRCA2-202ENST00000470094 GTF2IP78347 998 aa7.97□□□□□ -1.13
BRCA2-202ENST00000470094 CLN3Q13286 438 aa7.97□□□□□ -1.13
BRCA2-202ENST00000470094 ESCO1Q5FWF5 840 aa7.97□□□□□ -1.13
BRCA2-202ENST00000470094 TRIM50Q86XT4 487 aa7.97□□□□□ -1.13
BRCA2-202ENST00000470094 CCDC97Q96F63 343 aaPredicted RBP7.97□□□□□ -1.13
BRCA2-202ENST00000470094 RAB6BQ9NRW1 208 aa7.97□□□□□ -1.13
BRCA2-202ENST00000470094 LMOD1P29536 600 aaPredicted RBP7.96□□□□□ -1.14
BRCA2-202ENST00000470094 PSME1Q06323 249 aa7.96□□□□□ -1.14
BRCA2-202ENST00000470094 MKRN1Q9UHC7 482 aaKnown RBP7.96□□□□□ -1.14
BRCA2-202ENST00000470094 FIGNL2A6NMB9 653 aa7.95□□□□□ -1.14
BRCA2-202ENST00000470094 ATP1A2P50993 1020 aa7.95□□□□□ -1.14
BRCA2-202ENST00000470094 ESYT1Q9BSJ8 1104 aa7.95□□□□□ -1.14
BRCA2-202ENST00000470094 DNMT3LQ9UJW3 386 aa7.95□□□□□ -1.14
BRCA2-202ENST00000470094 SOBPA7XYQ1 873 aa7.94□□□□□ -1.14
BRCA2-202ENST00000470094 GPC1P35052 558 aa7.94□□□□□ -1.14
BRCA2-202ENST00000470094 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.94□□□□□ -1.14
BRCA2-202ENST00000470094 RNF217Q8TC41 542 aa7.94□□□□□ -1.14
BRCA2-202ENST00000470094 CNKSR1Q969H4 720 aa7.94□□□□□ -1.14
BRCA2-202ENST00000470094 ETNK1Q9HBU6 452 aa7.94□□□□□ -1.14
BRCA2-202ENST00000470094 SERPINA10Q9UK55 444 aa7.94□□□□□ -1.14
BRCA2-202ENST00000470094 PCDHGA11Q9Y5H2 935 aa7.94□□□□□ -1.14
BRCA2-202ENST00000470094 STAU1O95793 577 aaKnown RBP7.93□□□□□ -1.14
BRCA2-202ENST00000470094 IL2RAP01589 272 aa7.93□□□□□ -1.14
BRCA2-202ENST00000470094 RNF144AP50876 292 aaPredicted RBP7.93□□□□□ -1.14
BRCA2-202ENST00000470094 GDF10P55107 478 aa7.93□□□□□ -1.14
BRCA2-202ENST00000470094 SLC27A3Q5K4L6 730 aa7.93□□□□□ -1.14
BRCA2-202ENST00000470094 CFAP70Q5T0N1 1121 aa7.93□□□□□ -1.14
BRCA2-202ENST00000470094 FOXD4L5Q5VV16 416 aaPredicted RBP7.93□□□□□ -1.14
BRCA2-202ENST00000470094 XAGE2Q96GT9 111 aa7.93□□□□□ -1.14
BRCA2-202ENST00000470094 INHAP05111 366 aa7.92□□□□□ -1.14
BRCA2-202ENST00000470094 RASA1P20936 1047 aa7.92□□□□□ -1.14
BRCA2-202ENST00000470094 SCNN1DP51172 638 aa7.92□□□□□ -1.14
BRCA2-202ENST00000470094 OGFOD1Q8N543 542 aa7.92□□□□□ -1.14
BRCA2-202ENST00000470094 DNAAF2Q9NVR5 837 aaKnown RBP7.92□□□□□ -1.14
BRCA2-202ENST00000470094 WASLO00401 505 aaPredicted RBP7.91□□□□□ -1.14
BRCA2-202ENST00000470094 RFX1P22670 979 aa7.91□□□□□ -1.14
BRCA2-202ENST00000470094 LYSMD3Q7Z3D4 306 aa7.91□□□□□ -1.14
BRCA2-202ENST00000470094 LARGE2Q8N3Y3 721 aa7.91□□□□□ -1.14
BRCA2-202ENST00000470094 TPCN2Q8NHX9 752 aa7.91□□□□□ -1.14
BRCA2-202ENST00000470094 VRTNQ9H8Y1 702 aa7.91□□□□□ -1.14
BRCA2-202ENST00000470094 RBM19Q9Y4C8 960 aaKnown RBP7.91□□□□□ -1.14
BRCA2-202ENST00000470094 GTF2E1P29083 439 aaPredicted RBP7.9□□□□□ -1.14
BRCA2-202ENST00000470094 CLDN10P78369 228 aa7.9□□□□□ -1.14
BRCA2-202ENST00000470094 CENPCQ03188 943 aa7.9□□□□□ -1.14
BRCA2-202ENST00000470094 TLR1Q15399 786 aa7.9□□□□□ -1.14
BRCA2-202ENST00000470094 LARP1Q6PKG0 1096 aaKnown RBP7.9□□□□□ -1.14
BRCA2-202ENST00000470094 PRICKLE2Q7Z3G6 844 aa7.9□□□□□ -1.14
BRCA2-202ENST00000470094 CCDC82Q8N4S0 544 aa7.9□□□□□ -1.14
BRCA2-202ENST00000470094 ZNF594Q96JF6 807 aaPredicted RBP7.9□□□□□ -1.14
BRCA2-202ENST00000470094 C1orf115Q9H7X2 142 aa7.9□□□□□ -1.14
BRCA2-202ENST00000470094 HRH3Q9Y5N1 445 aa7.9□□□□□ -1.14
BRCA2-202ENST00000470094 TMEM229AB2RXF0 380 aa7.89□□□□□ -1.15
BRCA2-202ENST00000470094 BACH1O14867 736 aa7.89□□□□□ -1.15
BRCA2-202ENST00000470094 KANK4Q5T7N3 995 aaPredicted RBP7.89□□□□□ -1.15
BRCA2-202ENST00000470094 CCDC102BQ68D86 513 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms