RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 MED14O60244 1454 aa9.66□□□□□ -0.86
TPM3-215ENST00000469717 RIOK3O14730 519 aaKnown RBP9.66□□□□□ -0.86
TPM3-215ENST00000469717 PDCL2Q8N4E4 241 aa9.66□□□□□ -0.86
TPM3-215ENST00000469717 STAC3Q96MF2 364 aa9.66□□□□□ -0.86
TPM3-215ENST00000469717 CGNQ9P2M7 1197 aaKnown RBP9.66□□□□□ -0.86
TPM3-215ENST00000469717 MAP3K4Q9Y6R4 1608 aa9.66□□□□□ -0.86
TPM3-215ENST00000469717 INTS3Q68E01 1043 aaKnown RBP9.66□□□□□ -0.86
TPM3-215ENST00000469717 C8orf58Q8NAV2 365 aa9.66□□□□□ -0.86
TPM3-215ENST00000469717 CWC22Q9HCG8 908 aaKnown RBP9.66□□□□□ -0.86
TPM3-215ENST00000469717 FBXO31Q5XUX0 539 aaPredicted RBP9.66□□□□□ -0.86
TPM3-215ENST00000469717 FAM83GA6ND36 823 aa9.65□□□□□ -0.86
TPM3-215ENST00000469717 DCTN1Q14203 1278 aa9.65□□□□□ -0.86
TPM3-215ENST00000469717 ALDH1L2Q3SY69 923 aa9.65□□□□□ -0.86
TPM3-215ENST00000469717 USP48Q86UV5 1035 aa9.65□□□□□ -0.86
TPM3-215ENST00000469717 PPRC1Q5VV67 1664 aaKnown RBP9.65□□□□□ -0.87
TPM3-215ENST00000469717 KNDC1Q76NI1 1749 aa9.65□□□□□ -0.87
TPM3-215ENST00000469717 BRD1O95696 1058 aa9.65□□□□□ -0.87
TPM3-215ENST00000469717 KCNF1Q9H3M0 494 aa9.65□□□□□ -0.87
TPM3-215ENST00000469717 HMGN5P82970 282 aaKnown RBP9.64□□□□□ -0.87
TPM3-215ENST00000469717 FKBP5Q13451 457 aaPredicted RBP9.64□□□□□ -0.87
TPM3-215ENST00000469717 PRIMPOLQ96LW4 560 aa9.64□□□□□ -0.87
TPM3-215ENST00000469717 CHMP4BQ9H444 224 aaKnown RBP9.64□□□□□ -0.87
TPM3-215ENST00000469717 EID1Q9Y6B2 187 aa9.64□□□□□ -0.87
TPM3-215ENST00000469717 MBD3O95983 291 aa9.64□□□□□ -0.87
TPM3-215ENST00000469717 SLC26A8Q96RN1 970 aa9.64□□□□□ -0.87
TPM3-215ENST00000469717 MBIPQ9NS73 344 aa9.64□□□□□ -0.87
TPM3-215ENST00000469717 A0A1W2PP64 1363 aa9.63□□□□□ -0.87
TPM3-215ENST00000469717 DIAPH1O60610 1272 aaKnown RBP9.63□□□□□ -0.87
TPM3-215ENST00000469717 GTF2F1P35269 517 aaKnown RBP eCLIP9.63□□□□□ -0.87
TPM3-215ENST00000469717 DCTPP1Q9H773 170 aa9.63□□□□□ -0.87
TPM3-215ENST00000469717 CNPY2Q9Y2B0 182 aa9.63□□□□□ -0.87
TPM3-215ENST00000469717 MINK1Q8N4C8 1332 aaPredicted RBP9.63□□□□□ -0.87
TPM3-215ENST00000469717 GIMAP6Q6P9H5 292 aa9.63□□□□□ -0.87
TPM3-215ENST00000469717 GTPBP4Q9BZE4 634 aaKnown RBP9.63□□□□□ -0.87
TPM3-215ENST00000469717 TMEM51Q9NW97 253 aa9.63□□□□□ -0.87
TPM3-215ENST00000469717 ABCC4O15439 1325 aa9.63□□□□□ -0.87
TPM3-215ENST00000469717 FYB1O15117 783 aa9.63□□□□□ -0.87
TPM3-215ENST00000469717 IPO4Q8TEX9 1081 aaKnown RBP9.63□□□□□ -0.87
TPM3-215ENST00000469717 TWISTNBQ3B726 338 aaPredicted RBP9.62□□□□□ -0.87
TPM3-215ENST00000469717 MROH2AA6NES4 1674 aa9.62□□□□□ -0.87
TPM3-215ENST00000469717 QRICH2Q9H0J4 1663 aa9.62□□□□□ -0.87
TPM3-215ENST00000469717 IL16Q14005 1332 aa9.62□□□□□ -0.87
TPM3-215ENST00000469717 ASXL2Q76L83 1435 aa9.62□□□□□ -0.87
TPM3-215ENST00000469717 SBNO2Q9Y2G9 1366 aa9.62□□□□□ -0.87
TPM3-215ENST00000469717 ADGRL1O94910 1474 aa9.62□□□□□ -0.87
TPM3-215ENST00000469717 HDGFP51858 240 aaKnown RBP9.62□□□□□ -0.87
TPM3-215ENST00000469717 SAMD1Q6SPF0 538 aaPredicted RBP9.62□□□□□ -0.87
TPM3-215ENST00000469717 ZNF771Q7L3S4 317 aaPredicted RBP9.62□□□□□ -0.87
TPM3-215ENST00000469717 KIF20AO95235 890 aa9.61□□□□□ -0.87
TPM3-215ENST00000469717 MEIS3Q99687 375 aa9.61□□□□□ -0.87
TPM3-215ENST00000469717 ANKRD36BQ8N2N9 1353 aa9.61□□□□□ -0.87
TPM3-215ENST00000469717 COL3A1P02461 1466 aaPredicted RBP9.61□□□□□ -0.87
TPM3-215ENST00000469717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.61□□□□□ -0.87
TPM3-215ENST00000469717 IL25Q9H293 177 aa9.61□□□□□ -0.87
TPM3-215ENST00000469717 ERC2O15083 957 aa9.61□□□□□ -0.87
TPM3-215ENST00000469717 FIBPO43427 364 aa9.61□□□□□ -0.87
TPM3-215ENST00000469717 LETM1O95202 739 aaPredicted RBP9.61□□□□□ -0.87
TPM3-215ENST00000469717 SPTLC3Q9NUV7 552 aa9.61□□□□□ -0.87
TPM3-215ENST00000469717 CHMP3Q9Y3E7 222 aa9.61□□□□□ -0.87
TPM3-215ENST00000469717 KIAA1210Q9ULL0 1709 aa9.61□□□□□ -0.87
TPM3-215ENST00000469717 PTCH1Q13635 1447 aa9.61□□□□□ -0.87
TPM3-215ENST00000469717 PLCD3Q8N3E9 789 aa9.6□□□□□ -0.87
TPM3-215ENST00000469717 SRCIN1Q9C0H9 1055 aa9.6□□□□□ -0.87
TPM3-215ENST00000469717 LRMPQ12912 555 aa9.6□□□□□ -0.87
TPM3-215ENST00000469717 KIAA1524Q8TCG1 905 aa9.6□□□□□ -0.87
TPM3-215ENST00000469717 ANO2Q9NQ90 1003 aa9.6□□□□□ -0.87
TPM3-215ENST00000469717 REC8O95072 547 aa9.6□□□□□ -0.87
TPM3-215ENST00000469717 CEP85Q6P2H3 762 aa9.6□□□□□ -0.87
TPM3-215ENST00000469717 TULP4Q9NRJ4 1543 aa9.6□□□□□ -0.87
TPM3-215ENST00000469717 NCBP1Q09161 790 aaKnown RBP9.59□□□□□ -0.87
TPM3-215ENST00000469717 C16orf45Q96MC5 204 aaPredicted RBP9.59□□□□□ -0.87
TPM3-215ENST00000469717 C14orf93Q9H972 538 aaKnown RBP9.59□□□□□ -0.87
TPM3-215ENST00000469717 PIK3R4Q99570 1358 aa9.59□□□□□ -0.87
TPM3-215ENST00000469717 EVC2Q86UK5 1308 aa9.59□□□□□ -0.87
TPM3-215ENST00000469717 LRRC7Q96NW7 1537 aa9.59□□□□□ -0.87
TPM3-215ENST00000469717 EXOC6BQ9Y2D4 811 aa9.59□□□□□ -0.87
TPM3-215ENST00000469717 ATP10DQ9P241 1426 aa9.59□□□□□ -0.87
TPM3-215ENST00000469717 MYOM2P54296 1465 aa9.59□□□□□ -0.87
TPM3-215ENST00000469717 KDM4AO75164 1064 aa9.59□□□□□ -0.87
TPM3-215ENST00000469717 PTGS1P23219 599 aa9.59□□□□□ -0.87
TPM3-215ENST00000469717 CASC1Q6TDU7 716 aa9.59□□□□□ -0.87
TPM3-215ENST00000469717 ANKRD7Q92527 254 aa9.59□□□□□ -0.87
TPM3-215ENST00000469717 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.59□□□□□ -0.87
TPM3-215ENST00000469717 V9GYY5 206 aaPredicted RBP9.59□□□□□ -0.87
TPM3-215ENST00000469717 SYAP1Q96A49 352 aaPredicted RBP9.59□□□□□ -0.87
TPM3-215ENST00000469717 ANKRD44Q8N8A2 993 aa9.58□□□□□ -0.88
TPM3-215ENST00000469717 RILPL2Q969X0 211 aa9.58□□□□□ -0.88
TPM3-215ENST00000469717 MSH6P52701 1360 aa9.58□□□□□ -0.88
TPM3-215ENST00000469717 MYO3AQ8NEV4 1616 aa9.58□□□□□ -0.88
TPM3-215ENST00000469717 TXNDC2Q86VQ3 553 aa9.58□□□□□ -0.88
TPM3-215ENST00000469717 UNC5CLQ8IV45 518 aa9.58□□□□□ -0.88
TPM3-215ENST00000469717 NRBP1Q9UHY1 535 aa9.58□□□□□ -0.88
TPM3-215ENST00000469717 CPA1P15085 419 aa9.58□□□□□ -0.88
TPM3-215ENST00000469717 ARHGAP45Q92619 1136 aa9.58□□□□□ -0.88
TPM3-215ENST00000469717 ST7Q9NRC1 585 aa9.58□□□□□ -0.88
TPM3-215ENST00000469717 CUL4AQ13619 759 aa9.57□□□□□ -0.88
TPM3-215ENST00000469717 EMILIN1Q9Y6C2 1016 aa9.57□□□□□ -0.88
TPM3-215ENST00000469717 F6X3S4 739 aa9.57□□□□□ -0.88
TPM3-215ENST00000469717 MAP4K4O95819 1239 aaPredicted RBP9.57□□□□□ -0.88
TPM3-215ENST00000469717 PDE1AP54750 535 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms