RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 RGPD5Q99666 1765 aa12.85□□□□□ -0.35
SEMA4D-215ENST00000469653 CPDO75976 1380 aa12.85□□□□□ -0.35
SEMA4D-215ENST00000469653 PDE3BQ13370 1112 aa12.85□□□□□ -0.35
SEMA4D-215ENST00000469653 PEAK1Q9H792 1746 aa12.85□□□□□ -0.35
SEMA4D-215ENST00000469653 AMPHP49418 695 aa12.85□□□□□ -0.35
SEMA4D-215ENST00000469653 MTHFSP49914 203 aa12.85□□□□□ -0.35
SEMA4D-215ENST00000469653 CRBNQ96SW2 442 aa12.85□□□□□ -0.35
SEMA4D-215ENST00000469653 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
SEMA4D-215ENST00000469653 CNPY4Q8N129 248 aa12.84□□□□□ -0.35
SEMA4D-215ENST00000469653 COL18A1P39060 1754 aa12.84□□□□□ -0.35
SEMA4D-215ENST00000469653 CHMP4BQ9H444 224 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-215ENST00000469653 MEX3CQ5U5Q3 659 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-215ENST00000469653 COL14A1Q05707 1796 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-215ENST00000469653 NAP1L2Q9ULW6 460 aaPredicted RBP12.83□□□□□ -0.36
SEMA4D-215ENST00000469653 HOXC9P31274 260 aa12.82□□□□□ -0.36
SEMA4D-215ENST00000469653 C8orf37Q96NL8 207 aa12.82□□□□□ -0.36
SEMA4D-215ENST00000469653 FLT4P35916 1363 aa12.82□□□□□ -0.36
SEMA4D-215ENST00000469653 TMED8Q6PL24 325 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-215ENST00000469653 IP6K1Q92551 441 aa12.82□□□□□ -0.36
SEMA4D-215ENST00000469653 BCCIPQ9P287 314 aaKnown RBP eCLIP12.82□□□□□ -0.36
SEMA4D-215ENST00000469653 AXIN2Q9Y2T1 843 aa12.82□□□□□ -0.36
SEMA4D-215ENST00000469653 PLCH1Q4KWH8 1693 aa12.82□□□□□ -0.36
SEMA4D-215ENST00000469653 NFKBIBQ15653 356 aa12.82□□□□□ -0.36
SEMA4D-215ENST00000469653 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
SEMA4D-215ENST00000469653 RTL1A6NKG5 1358 aa12.81□□□□□ -0.36
SEMA4D-215ENST00000469653 HSP90AB2PQ58FF8 381 aa12.81□□□□□ -0.36
SEMA4D-215ENST00000469653 LMO7Q8WWI1 1683 aa12.81□□□□□ -0.36
SEMA4D-215ENST00000469653 KIF24Q5T7B8 1368 aa12.81□□□□□ -0.36
SEMA4D-215ENST00000469653 GSE1Q14687 1217 aa12.81□□□□□ -0.36
SEMA4D-215ENST00000469653 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
SEMA4D-215ENST00000469653 CDK12Q9NYV4 1490 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-215ENST00000469653 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
SEMA4D-215ENST00000469653 CAMTA1Q9Y6Y1 1673 aa12.8□□□□□ -0.36
SEMA4D-215ENST00000469653 ABCC6O95255 1503 aa12.79□□□□□ -0.36
SEMA4D-215ENST00000469653 LTV1Q96GA3 475 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-215ENST00000469653 DDRGK1Q96HY6 314 aa12.79□□□□□ -0.36
SEMA4D-215ENST00000469653 BLMP54132 1417 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-215ENST00000469653 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
SEMA4D-215ENST00000469653 INSRP06213 1382 aa12.79□□□□□ -0.36
SEMA4D-215ENST00000469653 NWD2Q9ULI1 1742 aa12.78□□□□□ -0.36
SEMA4D-215ENST00000469653 KDM2BQ8NHM5 1336 aa12.78□□□□□ -0.36
SEMA4D-215ENST00000469653 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
SEMA4D-215ENST00000469653 FRAT1Q92837 279 aaPredicted RBP12.78□□□□□ -0.36
SEMA4D-215ENST00000469653 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
SEMA4D-215ENST00000469653 RGPD2P0DJD1 1756 aa12.77□□□□□ -0.36
SEMA4D-215ENST00000469653 EVA1CP58658 441 aa12.77□□□□□ -0.36
SEMA4D-215ENST00000469653 ANKRD24Q8TF21 1146 aa12.77□□□□□ -0.36
SEMA4D-215ENST00000469653 SLIT2O94813 1529 aa12.77□□□□□ -0.37
SEMA4D-215ENST00000469653 COL5A2P05997 1499 aaPredicted RBP12.77□□□□□ -0.37
SEMA4D-215ENST00000469653 COL3A1P02461 1466 aaPredicted RBP12.77□□□□□ -0.37
SEMA4D-215ENST00000469653 NRAPQ86VF7 1730 aa12.77□□□□□ -0.37
SEMA4D-215ENST00000469653 EIF4A2Q14240 407 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-215ENST00000469653 FNBP4Q8N3X1 1017 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-215ENST00000469653 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-215ENST00000469653 CSB-PGBD3P0DP91 1061 aa12.76□□□□□ -0.37
SEMA4D-215ENST00000469653 ERBB3P21860 1342 aa12.76□□□□□ -0.37
SEMA4D-215ENST00000469653 AFF2P51816 1311 aa12.76□□□□□ -0.37
SEMA4D-215ENST00000469653 USP21Q9UK80 565 aa12.75□□□□□ -0.37
SEMA4D-215ENST00000469653 IL13P35225 146 aa12.75□□□□□ -0.37
SEMA4D-215ENST00000469653 SLKQ9H2G2 1235 aaPredicted RBP12.75□□□□□ -0.37
SEMA4D-215ENST00000469653 BCL9LQ86UU0 1499 aa12.74□□□□□ -0.37
SEMA4D-215ENST00000469653 WDR43Q15061 677 aaKnown RBP eCLIP12.74□□□□□ -0.37
SEMA4D-215ENST00000469653 C8orf34Q49A92 452 aa12.74□□□□□ -0.37
SEMA4D-215ENST00000469653 LARP1Q6PKG0 1096 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-215ENST00000469653 UNC5CLQ8IV45 518 aa12.74□□□□□ -0.37
SEMA4D-215ENST00000469653 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-215ENST00000469653 CWC22Q9HCG8 908 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-215ENST00000469653 FAM208AQ9UK61 1670 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-215ENST00000469653 CCDC146Q8IYE0 955 aa12.74□□□□□ -0.37
SEMA4D-215ENST00000469653 WDR17Q8IZU2 1322 aa12.74□□□□□ -0.37
SEMA4D-215ENST00000469653 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-215ENST00000469653 ZBTB22O15209 634 aa12.73□□□□□ -0.37
SEMA4D-215ENST00000469653 TOM1L2Q6ZVM7 507 aa12.73□□□□□ -0.37
SEMA4D-215ENST00000469653 U2SURPO15042 1029 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-215ENST00000469653 WWC1Q8IX03 1113 aa12.73□□□□□ -0.37
SEMA4D-215ENST00000469653 NLRP2Q9NX02 1062 aa12.73□□□□□ -0.37
SEMA4D-215ENST00000469653 NCLP19338 710 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-215ENST00000469653 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
SEMA4D-215ENST00000469653 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
SEMA4D-215ENST00000469653 GZF1Q9H116 711 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-215ENST00000469653 RGPD1P0DJD0 1748 aa12.72□□□□□ -0.37
SEMA4D-215ENST00000469653 EYA1Q99502 592 aa12.72□□□□□ -0.37
SEMA4D-215ENST00000469653 USHBP1Q8N6Y0 703 aa12.71□□□□□ -0.37
SEMA4D-215ENST00000469653 CRB1P82279 1406 aa12.71□□□□□ -0.37
SEMA4D-215ENST00000469653 FRAT2O75474 233 aaPredicted RBP12.71□□□□□ -0.38
SEMA4D-215ENST00000469653 FAM161AQ3B820 660 aa12.71□□□□□ -0.38
SEMA4D-215ENST00000469653 CENPQQ7L2Z9 268 aaPredicted RBP12.71□□□□□ -0.38
SEMA4D-215ENST00000469653 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.38
SEMA4D-215ENST00000469653 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
SEMA4D-215ENST00000469653 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
SEMA4D-215ENST00000469653 VPS72Q15906 364 aa12.7□□□□□ -0.38
SEMA4D-215ENST00000469653 DUSP27Q5VZP5 1158 aa12.7□□□□□ -0.38
SEMA4D-215ENST00000469653 CARD10Q9BWT7 1032 aa12.7□□□□□ -0.38
SEMA4D-215ENST00000469653 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
SEMA4D-215ENST00000469653 HMOX1P09601 288 aa12.69□□□□□ -0.38
SEMA4D-215ENST00000469653 ZNF772Q68DY9 489 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-215ENST00000469653 SULT6B1Q6IMI4 303 aa12.69□□□□□ -0.38
SEMA4D-215ENST00000469653 QTRT2Q9H974 415 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-215ENST00000469653 AEBP1Q8IUX7 1158 aa12.68□□□□□ -0.38
SEMA4D-215ENST00000469653 TRPC5Q9UL62 973 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms