RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 GCP02774 474 aa11.32□□□□□ -0.6
GAPVD1-213ENST00000469498 KCNH5Q8NCM2 988 aa11.32□□□□□ -0.6
GAPVD1-213ENST00000469498 MAP3K19Q56UN5 1328 aa11.32□□□□□ -0.6
GAPVD1-213ENST00000469498 RTL1A6NKG5 1358 aa11.31□□□□□ -0.6
GAPVD1-213ENST00000469498 KIAA0232Q92628 1395 aa11.31□□□□□ -0.6
GAPVD1-213ENST00000469498 NUTM2BA6NNL0 878 aaPredicted RBP11.31□□□□□ -0.6
GAPVD1-213ENST00000469498 NUTM2EB1AL46 878 aaPredicted RBP11.31□□□□□ -0.6
GAPVD1-213ENST00000469498 ST18O60284 1047 aa11.31□□□□□ -0.6
GAPVD1-213ENST00000469498 ZC3H6P61129 1189 aaKnown RBP11.31□□□□□ -0.6
GAPVD1-213ENST00000469498 CCDC184Q52MB2 194 aa11.31□□□□□ -0.6
GAPVD1-213ENST00000469498 NUTM2AQ8IVF1 878 aaPredicted RBP11.31□□□□□ -0.6
GAPVD1-213ENST00000469498 FBXO41Q8TF61 875 aa11.31□□□□□ -0.6
GAPVD1-213ENST00000469498 DLG5Q8TDM6 1919 aa11.31□□□□□ -0.6
GAPVD1-213ENST00000469498 FLT4P35916 1363 aa11.3□□□□□ -0.6
GAPVD1-213ENST00000469498 MTHFSP49914 203 aa11.3□□□□□ -0.6
GAPVD1-213ENST00000469498 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
GAPVD1-213ENST00000469498 POLKQ9UBT6 870 aa11.3□□□□□ -0.6
GAPVD1-213ENST00000469498 CPDO75976 1380 aa11.29□□□□□ -0.6
GAPVD1-213ENST00000469498 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
GAPVD1-213ENST00000469498 AMPHP49418 695 aa11.29□□□□□ -0.6
GAPVD1-213ENST00000469498 GSE1Q14687 1217 aa11.29□□□□□ -0.6
GAPVD1-213ENST00000469498 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
GAPVD1-213ENST00000469498 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
GAPVD1-213ENST00000469498 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
GAPVD1-213ENST00000469498 CHRNA2Q15822 529 aa11.28□□□□□ -0.6
GAPVD1-213ENST00000469498 ARHGEF25Q86VW2 580 aa11.28□□□□□ -0.6
GAPVD1-213ENST00000469498 PRDM11Q9NQV5 511 aa11.28□□□□□ -0.6
GAPVD1-213ENST00000469498 PARP4Q9UKK3 1724 aaKnown RBP11.28□□□□□ -0.6
GAPVD1-213ENST00000469498 KIF24Q5T7B8 1368 aa11.28□□□□□ -0.6
GAPVD1-213ENST00000469498 BLMP54132 1417 aaPredicted RBP11.27□□□□□ -0.6
GAPVD1-213ENST00000469498 CCER2I3L3R5 266 aa11.27□□□□□ -0.61
GAPVD1-213ENST00000469498 ADAMTS2O95450 1211 aa11.27□□□□□ -0.61
GAPVD1-213ENST00000469498 HOXC9P31274 260 aa11.27□□□□□ -0.61
GAPVD1-213ENST00000469498 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
GAPVD1-213ENST00000469498 CFAP53Q96M91 514 aa11.27□□□□□ -0.61
GAPVD1-213ENST00000469498 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.61
GAPVD1-213ENST00000469498 SPATA31A6Q5VVP1 1343 aa11.27□□□□□ -0.61
GAPVD1-213ENST00000469498 COL5A2P05997 1499 aaPredicted RBP11.26□□□□□ -0.61
GAPVD1-213ENST00000469498 HSP90AB2PQ58FF8 381 aa11.26□□□□□ -0.61
GAPVD1-213ENST00000469498 IER5LQ5T953 404 aa11.26□□□□□ -0.61
GAPVD1-213ENST00000469498 INSRP06213 1382 aa11.26□□□□□ -0.61
GAPVD1-213ENST00000469498 LTV1Q96GA3 475 aaPredicted RBP11.25□□□□□ -0.61
GAPVD1-213ENST00000469498 SHANK3Q9BYB0 1731 aa11.25□□□□□ -0.61
GAPVD1-213ENST00000469498 IP6K1Q92551 441 aa11.24□□□□□ -0.61
GAPVD1-213ENST00000469498 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
GAPVD1-213ENST00000469498 FAM83GA6ND36 823 aa11.23□□□□□ -0.61
GAPVD1-213ENST00000469498 DIAPH1O60610 1272 aaKnown RBP11.23□□□□□ -0.61
GAPVD1-213ENST00000469498 EIF4A2Q14240 407 aaKnown RBP11.23□□□□□ -0.61
GAPVD1-213ENST00000469498 MEX3CQ5U5Q3 659 aaKnown RBP11.23□□□□□ -0.61
GAPVD1-213ENST00000469498 TMEM121BQ9BXQ6 578 aaPredicted RBP11.23□□□□□ -0.61
GAPVD1-213ENST00000469498 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
GAPVD1-213ENST00000469498 AXIN2Q9Y2T1 843 aa11.23□□□□□ -0.61
GAPVD1-213ENST00000469498 SLIT2O94813 1529 aa11.23□□□□□ -0.61
GAPVD1-213ENST00000469498 TTLL13PA6NNM8 815 aa11.22□□□□□ -0.61
GAPVD1-213ENST00000469498 U2SURPO15042 1029 aaKnown RBP11.22□□□□□ -0.61
GAPVD1-213ENST00000469498 RGL2O15211 777 aa11.22□□□□□ -0.61
GAPVD1-213ENST00000469498 ANKRD24Q8TF21 1146 aa11.22□□□□□ -0.61
GAPVD1-213ENST00000469498 C8orf37Q96NL8 207 aa11.22□□□□□ -0.61
GAPVD1-213ENST00000469498 ERBB3P21860 1342 aa11.21□□□□□ -0.61
GAPVD1-213ENST00000469498 MAP3K13O43283 966 aa11.21□□□□□ -0.61
GAPVD1-213ENST00000469498 WDR43Q15061 677 aaKnown RBP eCLIP11.21□□□□□ -0.61
GAPVD1-213ENST00000469498 FAM9BQ8IZU0 186 aa11.21□□□□□ -0.61
GAPVD1-213ENST00000469498 STRN4Q9NRL3 753 aa11.21□□□□□ -0.61
GAPVD1-213ENST00000469498 CSB-PGBD3P0DP91 1061 aa11.2□□□□□ -0.62
GAPVD1-213ENST00000469498 IL13P35225 146 aa11.2□□□□□ -0.62
GAPVD1-213ENST00000469498 BTG4Q9NY30 223 aa11.2□□□□□ -0.62
GAPVD1-213ENST00000469498 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
GAPVD1-213ENST00000469498 NCAPD2Q15021 1401 aa11.19□□□□□ -0.62
GAPVD1-213ENST00000469498 BRWD3Q6RI45 1802 aa11.19□□□□□ -0.62
GAPVD1-213ENST00000469498 U2AF1L5P0DN76 240 aaPredicted RBP11.19□□□□□ -0.62
GAPVD1-213ENST00000469498 U2AF1Q01081 240 aaKnown RBP eCLIP11.19□□□□□ -0.62
GAPVD1-213ENST00000469498 USHBP1Q8N6Y0 703 aa11.19□□□□□ -0.62
GAPVD1-213ENST00000469498 PNISRQ8TF01 805 aaKnown RBP11.19□□□□□ -0.62
GAPVD1-213ENST00000469498 NUDCQ9Y266 331 aa11.19□□□□□ -0.62
GAPVD1-213ENST00000469498 GLI3P10071 1580 aa11.19□□□□□ -0.62
GAPVD1-213ENST00000469498 CRB1P82279 1406 aa11.18□□□□□ -0.62
GAPVD1-213ENST00000469498 WDR17Q8IZU2 1322 aa11.18□□□□□ -0.62
GAPVD1-213ENST00000469498 IGSF1Q8N6C5 1336 aa11.18□□□□□ -0.62
GAPVD1-213ENST00000469498 HMOX1P09601 288 aa11.18□□□□□ -0.62
GAPVD1-213ENST00000469498 NGLY1Q96IV0 654 aa11.18□□□□□ -0.62
GAPVD1-213ENST00000469498 EYA1Q99502 592 aa11.18□□□□□ -0.62
GAPVD1-213ENST00000469498 KAT6BQ8WYB5 2073 aa11.18□□□□□ -0.62
GAPVD1-213ENST00000469498 SCN11AQ9UI33 1791 aa11.18□□□□□ -0.62
GAPVD1-213ENST00000469498 BCL9LQ86UU0 1499 aa11.18□□□□□ -0.62
GAPVD1-213ENST00000469498 AFF2P51816 1311 aa11.17□□□□□ -0.62
GAPVD1-213ENST00000469498 SNPHO15079 494 aa11.17□□□□□ -0.62
GAPVD1-213ENST00000469498 CHRM1P11229 460 aaPredicted RBP11.17□□□□□ -0.62
GAPVD1-213ENST00000469498 EVA1CP58658 441 aa11.17□□□□□ -0.62
GAPVD1-213ENST00000469498 LARP1Q6PKG0 1096 aaKnown RBP11.17□□□□□ -0.62
GAPVD1-213ENST00000469498 TOM1L2Q6ZVM7 507 aa11.17□□□□□ -0.62
GAPVD1-213ENST00000469498 AEBP1Q8IUX7 1158 aa11.17□□□□□ -0.62
GAPVD1-213ENST00000469498 NLRP2Q9NX02 1062 aa11.17□□□□□ -0.62
GAPVD1-213ENST00000469498 TRIM35Q9UPQ4 493 aa11.17□□□□□ -0.62
GAPVD1-213ENST00000469498 MEGF6O75095 1541 aa11.17□□□□□ -0.62
GAPVD1-213ENST00000469498 THSD7AQ9UPZ6 1657 aa11.17□□□□□ -0.62
GAPVD1-213ENST00000469498 NBPF6Q5VWK0 638 aa11.16□□□□□ -0.62
GAPVD1-213ENST00000469498 SULT6B1Q6IMI4 303 aa11.16□□□□□ -0.62
GAPVD1-213ENST00000469498 CCDC146Q8IYE0 955 aa11.16□□□□□ -0.62
GAPVD1-213ENST00000469498 NBPF4Q96M43 638 aa11.16□□□□□ -0.62
GAPVD1-213ENST00000469498 ADAMTS8Q9UP79 889 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms