RNA–Protein interactions for RNA: ENST00000469455.1

TMC1-203, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-203ENST00000469455 HS3ST6Q96QI5 342 aa10.05□□□□□ -0.8
TMC1-203ENST00000469455 PRR14Q9BWN1 585 aa10.05□□□□□ -0.8
TMC1-203ENST00000469455 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.05□□□□□ -0.8
TMC1-203ENST00000469455 PODXL2Q9NZ53 605 aa10.05□□□□□ -0.8
TMC1-203ENST00000469455 ANKRD50Q9ULJ7 1429 aa10.05□□□□□ -0.8
TMC1-203ENST00000469455 YEATS2Q9ULM3 1422 aa10.05□□□□□ -0.8
TMC1-203ENST00000469455 RNF17Q9BXT8 1623 aaKnown RBP10.04□□□□□ -0.8
TMC1-203ENST00000469455 RRP7BPQ9NSQ0 103 aa10.04□□□□□ -0.8
TMC1-203ENST00000469455 SIGLEC1Q9BZZ2 1709 aa10.04□□□□□ -0.8
TMC1-203ENST00000469455 KDM5DQ9BY66 1539 aa10.03□□□□□ -0.8
TMC1-203ENST00000469455 POTEB3A0JP26 581 aa10.03□□□□□ -0.8
TMC1-203ENST00000469455 GPR37L1O60883 481 aa10.03□□□□□ -0.8
TMC1-203ENST00000469455 LSM11P83369 360 aaKnown RBP eCLIP10.03□□□□□ -0.8
TMC1-203ENST00000469455 DESI1Q6ICB0 168 aa10.03□□□□□ -0.8
TMC1-203ENST00000469455 POTEBQ6S5H4 581 aa10.03□□□□□ -0.8
TMC1-203ENST00000469455 SLC27A5Q9Y2P5 690 aa10.03□□□□□ -0.8
TMC1-203ENST00000469455 A2MP01023 1474 aa10.03□□□□□ -0.8
TMC1-203ENST00000469455 HRO43593 1189 aa10.02□□□□□ -0.81
TMC1-203ENST00000469455 PPP1R15AO75807 674 aaPredicted RBP10.02□□□□□ -0.81
TMC1-203ENST00000469455 PUS10Q3MIT2 529 aaKnown RBP10.02□□□□□ -0.81
TMC1-203ENST00000469455 HDGFL1Q5TGJ6 251 aa10.02□□□□□ -0.81
TMC1-203ENST00000469455 MROH1Q8NDA8 1641 aa10.02□□□□□ -0.81
TMC1-203ENST00000469455 PRDM15P57071 1507 aaPredicted RBP10.02□□□□□ -0.81
TMC1-203ENST00000469455 DHX29Q7Z478 1369 aaKnown RBP10.01□□□□□ -0.81
TMC1-203ENST00000469455 IQGAP3Q86VI3 1631 aa10.01□□□□□ -0.81
TMC1-203ENST00000469455 EPS8L1Q8TE68 723 aa10.01□□□□□ -0.81
TMC1-203ENST00000469455 FAM163AQ96GL9 167 aaPredicted RBP10.01□□□□□ -0.81
TMC1-203ENST00000469455 ATP10AO60312 1499 aa10.01□□□□□ -0.81
TMC1-203ENST00000469455 AGLP35573 1532 aa10.01□□□□□ -0.81
TMC1-203ENST00000469455 VWDEQ8N2E2 1590 aa10.01□□□□□ -0.81
TMC1-203ENST00000469455 NEUROD1Q13562 356 aa10□□□□□ -0.81
TMC1-203ENST00000469455 ANKK1Q8NFD2 765 aa10□□□□□ -0.81
TMC1-203ENST00000469455 SALL2Q9Y467 1007 aaPredicted RBP10□□□□□ -0.81
TMC1-203ENST00000469455 PER1O15534 1290 aaPredicted RBP9.99□□□□□ -0.81
TMC1-203ENST00000469455 PPP4CP60510 307 aa9.99□□□□□ -0.81
TMC1-203ENST00000469455 VAC14Q08AM6 782 aa9.99□□□□□ -0.81
TMC1-203ENST00000469455 ADAMTS19Q8TE59 1207 aa9.99□□□□□ -0.81
TMC1-203ENST00000469455 STAC3Q96MF2 364 aa9.99□□□□□ -0.81
TMC1-203ENST00000469455 SOWAHBA6NEL2 793 aa9.98□□□□□ -0.81
TMC1-203ENST00000469455 GOLGA8CPA6NN73 597 aa9.98□□□□□ -0.81
TMC1-203ENST00000469455 NR6A1Q15406 480 aa9.98□□□□□ -0.81
TMC1-203ENST00000469455 TRAIPQ9BWF2 469 aa9.98□□□□□ -0.81
TMC1-203ENST00000469455 PZPP20742 1482 aa9.98□□□□□ -0.81
TMC1-203ENST00000469455 ZC3H13Q5T200 1668 aaKnown RBP9.97□□□□□ -0.81
TMC1-203ENST00000469455 CEP152O94986 1710 aa9.97□□□□□ -0.81
TMC1-203ENST00000469455 LYPD8Q6UX82 237 aa9.97□□□□□ -0.81
TMC1-203ENST00000469455 ALG2Q9H553 416 aa9.97□□□□□ -0.81
TMC1-203ENST00000469455 MYT1LQ9UL68 1186 aa9.97□□□□□ -0.81
TMC1-203ENST00000469455 FAM135AQ9P2D6 1515 aa9.97□□□□□ -0.81
TMC1-203ENST00000469455 TET3O43151 1660 aa9.96□□□□□ -0.81
TMC1-203ENST00000469455 SOX11P35716 441 aa9.96□□□□□ -0.82
TMC1-203ENST00000469455 BRICD5Q6PL45 260 aa9.96□□□□□ -0.82
TMC1-203ENST00000469455 PNMA1Q8ND90 353 aa9.96□□□□□ -0.82
TMC1-203ENST00000469455 USB1Q9BQ65 265 aaKnown RBP9.96□□□□□ -0.82
TMC1-203ENST00000469455 TSR3Q9UJK0 312 aaKnown RBP9.96□□□□□ -0.82
TMC1-203ENST00000469455 ZBTB7CA1YPR0 619 aa9.95□□□□□ -0.82
TMC1-203ENST00000469455 BLOC1S3Q6QNY0 202 aa9.95□□□□□ -0.82
TMC1-203ENST00000469455 RNF19BQ6ZMZ0 732 aa9.95□□□□□ -0.82
TMC1-203ENST00000469455 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
TMC1-203ENST00000469455 LMTK2Q8IWU2 1503 aa9.95□□□□□ -0.82
TMC1-203ENST00000469455 APLP1P51693 650 aa9.94□□□□□ -0.82
TMC1-203ENST00000469455 SCUBE3Q8IX30 993 aa9.94□□□□□ -0.82
TMC1-203ENST00000469455 E9PCH4 1651 aa9.93□□□□□ -0.82
TMC1-203ENST00000469455 NR1I2O75469 434 aa9.93□□□□□ -0.82
TMC1-203ENST00000469455 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
TMC1-203ENST00000469455 ANKRD13DQ6ZTN6 518 aa9.93□□□□□ -0.82
TMC1-203ENST00000469455 RETREG2Q8NC44 543 aa9.93□□□□□ -0.82
TMC1-203ENST00000469455 PCDHB3Q9Y5E6 796 aa9.93□□□□□ -0.82
TMC1-203ENST00000469455 CAMSAP1Q5T5Y3 1602 aa9.93□□□□□ -0.82
TMC1-203ENST00000469455 ABCC3O15438 1527 aa9.92□□□□□ -0.82
TMC1-203ENST00000469455 EFCAB6Q5THR3 1501 aa9.92□□□□□ -0.82
TMC1-203ENST00000469455 NUP155O75694 1391 aa9.92□□□□□ -0.82
TMC1-203ENST00000469455 BCAMP50895 628 aa9.92□□□□□ -0.82
TMC1-203ENST00000469455 PBXIP1Q96AQ6 731 aa9.92□□□□□ -0.82
TMC1-203ENST00000469455 THAP11Q96EK4 314 aa9.92□□□□□ -0.82
TMC1-203ENST00000469455 PPP1R12CQ9BZL4 782 aa9.92□□□□□ -0.82
TMC1-203ENST00000469455 MROH2AA6NES4 1674 aa9.91□□□□□ -0.82
TMC1-203ENST00000469455 KIF3BO15066 747 aa9.91□□□□□ -0.82
TMC1-203ENST00000469455 PDE4CQ08493 712 aa9.91□□□□□ -0.82
TMC1-203ENST00000469455 SEMA3FQ13275 785 aa9.91□□□□□ -0.82
TMC1-203ENST00000469455 CFAP70Q5T0N1 1121 aa9.91□□□□□ -0.82
TMC1-203ENST00000469455 KCTD17Q8N5Z5 321 aa9.91□□□□□ -0.82
TMC1-203ENST00000469455 WNT2BQ93097 391 aa9.91□□□□□ -0.82
TMC1-203ENST00000469455 FER1L4A9Z1Z3 1794 aa9.91□□□□□ -0.82
TMC1-203ENST00000469455 SPHKAPQ2M3C7 1700 aa9.9□□□□□ -0.82
TMC1-203ENST00000469455 CLTCQ00610 1675 aaKnown RBP9.9□□□□□ -0.82
TMC1-203ENST00000469455 EIF4G2P78344 907 aaKnown RBP eCLIP9.9□□□□□ -0.82
TMC1-203ENST00000469455 CFAP65Q6ZU64 1925 aaKnown RBP9.9□□□□□ -0.83
TMC1-203ENST00000469455 KANK1Q14678 1352 aa9.89□□□□□ -0.83
TMC1-203ENST00000469455 RFX1P22670 979 aa9.89□□□□□ -0.83
TMC1-203ENST00000469455 TRIM52Q96A61 297 aa9.89□□□□□ -0.83
TMC1-203ENST00000469455 PALM3A6NDB9 673 aaPredicted RBP9.88□□□□□ -0.83
TMC1-203ENST00000469455 F12P00748 615 aaPredicted RBP9.88□□□□□ -0.83
TMC1-203ENST00000469455 JUNDP17535 347 aa9.88□□□□□ -0.83
TMC1-203ENST00000469455 SRPK2P78362 688 aaKnown RBP9.88□□□□□ -0.83
TMC1-203ENST00000469455 NR1H3Q13133 447 aa9.88□□□□□ -0.83
TMC1-203ENST00000469455 PTPRNQ16849 979 aa9.88□□□□□ -0.83
TMC1-203ENST00000469455 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
TMC1-203ENST00000469455 MPHOSPH9Q99550 1183 aa9.88□□□□□ -0.83
TMC1-203ENST00000469455 FKBPLQ9UIM3 349 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms